mRNA_H-elongata_contig108751.711.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D7FIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP6_ECTSI) HSP 1 Score: 322 bits (824), Expect = 5.380e-99 Identity = 206/426 (48.36%), Postives = 241/426 (56.57%), Query Frame = 1
Query: 7 GLSTVDCSGLCARGHYCPAGST------------------------------------SAFQEP----------------CPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRT---KCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHE-LVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGT-ELTRTGQAECMM-----GKTPPSAAFIVDRCPDNTVGWNGTV 1098
GL++ +CS +C G YCP GST +AFQ C A + PCLAS RA+ CGS FP+ V VG+YTY EG D GG GD+WSLAGQ RT +CEPG+YC+ GAR+PCP GT GSS GL++ SCSG AGY +G +EA GERCGG ++CP S+S EVG GNYTVGGPPDRR+AQE CP G+YC +GV PCP GT G PGLSSSACSG P GT+ V+G+ACPAGRYG G XXXXXXXXXXXXXXX S AR +ECGSG ++CP S AP +V GW+ATGG E TR+GQ EC+ G TPPS IV+RCPDNTVGWNGTV
Sbjct: 450 GLTSSNCSDVCPEGSYCPEGSTEPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAAFQYAXXXXXXXXXXXXTDGLCAEEGVCAREDDAPCLASLCDPGYFCPPGSTSARAHQCGSGEYYCPRGSGFPTTVGVGYYTYVEGSTD-GGSGDNWSLAGQLTRTAQAECEPGHYCVAGARLPCPPGTVGSSHGLASPSCSGPSLAGYY--SGAAEASLGERCGGPGWFCPEASSSPSEVGAGNYTVGGPPDRRVAQETCPAGSYCQEGVLFPCPPGTFGSLPGLSSSACSGPXXXXXXXPSGTSPSISTGKEVIGIACPAGRYGVEGMGXXXXXXXXXXXXXXXEESTSAREKECGSGSVFCPPESSAPVDVALGWFATGGDDESTRSGQVECIAATEGGGGTPPSGMSIVERCPDNTVGWNGTV 872
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A7S2WI84_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI84_9STRA) HSP 1 Score: 186 bits (471), Expect = 4.480e-51 Identity = 157/410 (38.29%), Postives = 196/410 (47.80%), Query Frame = 1
Query: 7 GLSTVDCSGLCARGHYCPAGS------------------------------------TSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANAC--------GSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTK---CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFI-VDRCPDNTVGWNG 1092
GL++ C+ C +GH+CP S TSA Q PC RF A+ P L S XXXXX G+S XXXXXX P+ V +G+YT G K G+ SLA + R CE YC+ G + CP GTFG++ LS++SCSG C GY C +S + CG +CP GS +V GNYT GG P R A+++C G YC G+RR C AG +G GL SS CSG+C G YCP+ + + T C AGR+ AG XXXXXXXXXXXX S+V +ECGS LYCP GS P V+ G+Y+TG RTGQ C TPP+ A + CP T G
Sbjct: 24 GLTSATCTSPCPQGHFCPEASVLPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSATQVPCRPGRFCAM----PGLESDLGNGDDNLXXXXXXXXXXXXXXXXXXXGASDVXXXXXXXLPTKVSLGYYT--TGPASK--PGEFQSLADAATRDSQEACEEATYCVDGVKTACPPGTFGATRALSSSSCSGLCAPGYYCPL-MSNNSQQRACGSVDVFCPLGSVVPTQVSPGNYTTGGAPHTRHAEQLCEPGHYCAGGLRRACRAGVYGSTYGLRSSDCSGACAPGYYCPEESVSATQ------FTCEAGRWSAAGAGTPLXXXXXXXXXXXXAGSDVPNKRECGSETLYCPVGSPKPFNVSRGYYSTGQNPRRRTGQVACNEQHTPPAGADRRISVCPSTTAPLQG 418
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D8M6U0_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6U0_BLAHO) HSP 1 Score: 177 bits (450), Expect = 1.560e-45 Identity = 137/413 (33.17%), Postives = 174/413 (42.13%), Query Frame = 1
Query: 7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR----RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQG----TAADTHEL-----------------------------------------VVVGVA--CPAGRYGGA-GXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA--TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
GLS CSGLC G+YCP GST+A AN CGS P V G+Y+ E S + + +S +T C G YC+ G + CPAGT+GS+ GL+T+ CSG C AGY C AG + A + CG YCP GS S ++V G Y+ GP R R Q ICP G+YC++GV+ CPAGT+G GLS+ CSG C AG YCP G TA D + V GV CPAG YG G S A A +CGS YCPEGSG+P +V+ G+Y+ E R+ Q C +G + + + CP T G
Sbjct: 1938 GLSNEQCSGLCEAGYYCPPGSTNAT-------------------------------------ANDCGSVDKYCPEGSGSPIDVSEGYYSGPE----------SSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLTTSECSGLCEAGYYCLAGSTNATAND-CGSVDKYCPEGSGSPIDVSEGYYS--GPESRNEANRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNG--VKNECPAGTYG 2298
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D8LXS3_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LXS3_BLAHO) HSP 1 Score: 177 bits (449), Expect = 2.140e-45 Identity = 137/413 (33.17%), Postives = 174/413 (42.13%), Query Frame = 1
Query: 7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR----RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQG----TAADTHEL-----------------------------------------VVVGVA--CPAGRYGGA-GXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA--TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
GLST CSGLC G+YCP GST+A AN CGS P V G+Y+ E S + + +S +T C G YC+ G + CPAGT+GS+ GL+T+ CSG C AGY C AG + A + CG YCP GS S ++V G Y+ GP R Q ICP G+YC++GV+ CPAGT+G GLS+ CSG C AG YCP G TA D + V GV CPAG YG G S A A +CGS YCPEGSG+P +V+ G+Y+ E R+ Q C +G + + + CP T G
Sbjct: 1663 GLSTEQCSGLCEAGYYCPPGSTNAT-------------------------------------ANDCGSVDKYCPEGSGSPIDVSEGYYSGPE----------SSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLTTSQCSGLCEAGYYCLAGSTNATAND-CGSVDKYCPEGSGSPIDVSEGYYS--GPESENEANRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESENESNRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLTTSECSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNG--VKNECPAGTYG 2023
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: T0SA84_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SA84_SAPDV) HSP 1 Score: 166 bits (421), Expect = 1.060e-44 Identity = 120/370 (32.43%), Postives = 160/370 (43.24%), Query Frame = 1
Query: 7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR-RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA-----TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVGWNGTV 1098
GL+T C+ +C YCP CPA + + TP CG + P+ V G+YT + ++ G G + L + CE G +C G + PCPAGT+G + GLS+A+C+G CPAGY C G + L C YCP +A+ V G T G R R+ Q +CP GTYC+ GVR CP G++G GLS+ ACSG+C G CP G + L CPAG Y G ++ A CGS YCP G+ AP V AG+YA G + TGQ C + T + +CP T G+N V
Sbjct: 27 GLTTKACAPVCTLS-YCPL-------PRCPAGYYCPLGAPTPI---------------------PCGGPTVFCPVGSSVPTLVTTGYYTIATRTLNPSGTGMTTGLVTRVAEVPCEVGTFCENGCKKPCPAGTYGMAHGLSSAACTGNCPAGYFCPLGSATYLD-TACVDPSVYCPGSNATPTPVTQGFLTTLGFDGRLRVGQTVCPLGTYCVRGVRHLCPWGSYGATTGLSTMACSGACAPGSTCPAGATSAQQAL------CPAGTYAINGKQCVPCRPGFWCSSGSPSPTQNA----CGSSSAYCPLGASAPLTVQAGYYAYSPNALSGANMDFTGQVLCNLQDT-----VLFPQCPSITTGFNSQV 351
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: T0QID9_SAPDV (Ephrin_rec_like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QID9_SAPDV) HSP 1 Score: 154 bits (390), Expect = 1.030e-37 Identity = 111/350 (31.71%), Postives = 146/350 (41.71%), Query Frame = 1
Query: 37 CARGHYCPAGSTSAFQEPCPARRFGAVLEGT-PCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
C G+YC G+ S PCPA RFG + T P + CG+ +P V G Y+ D G D + + + CEPG +C G R PCP G +GS++ ++ C+G C G+ C G S + CG A C GSAS V +G Y+ G R Q CP G+YC+DG CP GT+G P L+ CSG C G YCP G+ A A+A CG+ +YCP GS P V+ G+Y TGGT TR+GQA C MG ++ +CP T G
Sbjct: 640 CKPGYYCVQGARS----PCPAGRFGTSWKETNPLCTNACRRGHYCPVASAHDAVEPCGAPYLYCPSGSPYPVAVTAGFYSL---DSVAGLFSD---ITRRDAQAPCEPGSFCQYGLRYPCPGGRYGSAAQETSTLCTGLCQRGFYCPPGSSLPTQ-VACGNASVICRRGSASPEPVAVGYYSGGDTSPMRWYQLPCPLGSYCVDGTSFLCPGGTYGGVPQLTRPTCSGLCAPGYYCPTGSIA-------------------------------------------AQAFPCGNVSVYCPPGSPQPLAVSVGYYTTGGTNSTRSGQALCPMGSFCQHG--VLYQCPPGTFG 933
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A329T208_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T208_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.050e-35 Identity = 90/267 (33.71%), Postives = 131/267 (49.06%), Query Frame = 1
Query: 307 GDSWSLAGQSVRTK---CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVGWNGTV 1098
G+S ++ Q+ R+ C+ G YC+ G + CPAGT+G++ GLSTA+C+G CPAG+ C G ++ + C +C GS+ V IG +T+ R ICP G++C+ GV+ CP GT+G GL+S+ CSG C G CP+G+ + CPAG Y G + A CG+ YCP GS + V G++A G T T QA C++ P + +CP T G NG +
Sbjct: 308 GNSLAIRNQTTRSNQHICDKGSYCITGVKRLCPAGTYGATDGLSTAACTGPCPAGFYCPIGTADYSQ-HPCTLRTSFCRQGSSVPTAVDIGYFTMATQAGLRTDDTICPPGSFCVSGVQYLCPEGTYGATSGLTSNTCSGKCQDGYICPRGSISAKQS------PCPAGSYSRNGKFCAPCSPGYWCDVASPDPQQHA----CGADNAYCPLGSSSAQPVLDGYFAVGQRLNTHTSQALCILRNAPH-----LPQCPTRTTGVNGNL 558
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A6G0XDF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDF0_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.440e-35 Identity = 112/360 (31.11%), Postives = 147/360 (40.83%), Query Frame = 1
Query: 34 LCARGHYCPAGSTSAFQEPCPARRFGAVL-EGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIA---------QEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
LC G++C G + PCPA R+GA E A ACG + +P PV G+Y+ VD +G + + + CE GYYC+ G R PCP G +GS + + C+G C G+ C + + CGG+ C TGSA+ ++V G Y+ G R A Q C G YC +GV+ PCPAGT G P L++ ACSG CPAG CP ++ T A +CG L+CP GS P V AG+Y TG TRT QA C +G I CP T G
Sbjct: 740 LCEAGYFCQQG----LRSPCPAGRYGAASGETNSSCTGACIGGFFCPVASTNSSARACGGAHLYCPPGSPYPVPVSSGYYS-----VDST-LGLNSDPTRRDAQLPCEIGYYCVHGQRYPCPGGRYGSIARETNPLCTGLCRRGFYCPPNSTSPTQ-ILCGGSNLICRTGSAAPIQVSPGYYS-GSDTTRSDAVNRETMRWFQRPCDPGFYCQNGVQYPCPAGTFGSTPQLTTPACSGLCPAGYVCPPSSSNST-------------------------------------------AIQCGDVSLFCPVGSDVPRRVRAGFYTTGNLNATRTAQALCDVGHFCQGG--IRYECPSGTYG 1042
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: W4FJV2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJV2_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.140e-35 Identity = 88/240 (36.67%), Postives = 112/240 (46.67%), Query Frame = 1
Query: 25 CSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCP 744
C+G+C RG YCPA STSA QEP CG S P V G+Y+ S D + S+ + + CEPGYYC+ G R PCP GTFGS+ L T CSG+C AGY C + A + CG +CP GS++ L V G Y+VG R+ Q +C G +C G+ CP GT+G PGL+ C+G C AG YCP
Sbjct: 765 CTGVCRRGFYCPASSTSATQEP-------------------------------------CGGSNVVCRTGSVAPIGVFAGYYSGS--DTTRADAVTRESM--RWFQKPCEPGYYCVNGVRNPCPTGTFGSTGQLVTPFCSGKCSAGYYCTQASTSATQ-IMCGDVSVFCPVGSSAPLAVDAGYYSVGATNSTRVGQALCNVGQFCRGGIAYDCPQGTYGDIPGLTVGQCTGWCAAGFYCP 962
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A2P4YK08_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK08_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.880e-34 Identity = 111/376 (29.52%), Postives = 155/376 (41.22%), Query Frame = 1
Query: 37 CARGHYCPAGSTSAFQEPCPARRFG-AVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTY------------SEGDVDKGGIGDSWSLAGQSVRTK-----CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQ-ECGSGKLYCPEGSGA-PAEVNAGWYAT-------GGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
C RG+YC G + PCPA +G LE + A CG + A P PV G+Y+ + +K + + A ++ + CEPG YC+ G + CP G +G SG ++ C+G C GY C G S + + E CGG+ F C +GS + V G Y++G R Q+ C G++C+DGV+ PCPAGT G GLS++ACSG C G YCP S ++R Q ECGS +YCPEG+G P V++G+Y+ G T+ C G I RCP+ T G
Sbjct: 409 CERGYYCRDG----VRSPCPAGYYGDGNLETRSTCSGVCSSGFYCPLASWNSTARVCGDANVFCPSGSAVPLPVWSGYYSVRLLPFGADRLLVANAGSEKYSVSSTGEEAPKNEAIRDGQRICEPGTYCIDGKKYLCPVGRYGDQSGETSPLCAGLCSRGYRCPEGSSSSTQLE-CGGSNFVCGSGSPAPQLVHPGYYSIGPTATTRFFQQPCELGSFCIDGVKYPCPAGTFGATSGLSTAACSGKCAPGYYCPP--------------------------------------------SSISRTQNECGSSSVYCPEGTGKEPRFVSSGYYSVLTSGMVDDGRNATQNDMKICPKGFYCRQGIRI--RCPEGTYG 733 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig108751.711.1 >prot_H-elongata_contig108751.711.1 ID=prot_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp MGGLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASLCback to top mRNA from alignment at H-elongata_contig108751:139..2168+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig108751.711.1 ID=mRNA_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2030bp|location=Sequence derived from alignment at H-elongata_contig108751:139..2168+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig108751:139..2168+ >mRNA_H-elongata_contig108751.711.1 ID=mRNA_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig108751:139..2168+ (Himanthalia elongata Himel1 dioecious)back to top |