mRNA_H-elongata_contig108751.711.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig108751.711.1
Unique NamemRNA_H-elongata_contig108751.711.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D7FIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP6_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.380e-99
Identity = 206/426 (48.36%), Postives = 241/426 (56.57%), Query Frame = 1
Query:    7 GLSTVDCSGLCARGHYCPAGST------------------------------------SAFQEP----------------CPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRT---KCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHE-LVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGT-ELTRTGQAECMM-----GKTPPSAAFIVDRCPDNTVGWNGTV 1098
            GL++ +CS +C  G YCP GST                                    +AFQ                  C      A  +  PCLAS               RA+ CGS          FP+ V VG+YTY EG  D GG GD+WSLAGQ  RT   +CEPG+YC+ GAR+PCP GT GSS GL++ SCSG   AGY   +G +EA  GERCGG  ++CP  S+S  EVG GNYTVGGPPDRR+AQE CP G+YC +GV  PCP GT G  PGLSSSACSG        P GT+        V+G+ACPAGRYG  G  XXXXXXXXXXXXXXX  S  AR +ECGSG ++CP  S AP +V  GW+ATGG  E TR+GQ EC+      G TPPS   IV+RCPDNTVGWNGTV
Sbjct:  450 GLTSSNCSDVCPEGSYCPEGSTEPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAAFQYAXXXXXXXXXXXXTDGLCAEEGVCAREDDAPCLASLCDPGYFCPPGSTSARAHQCGSGEYYCPRGSGFPTTVGVGYYTYVEGSTD-GGSGDNWSLAGQLTRTAQAECEPGHYCVAGARLPCPPGTVGSSHGLASPSCSGPSLAGYY--SGAAEASLGERCGGPGWFCPEASSSPSEVGAGNYTVGGPPDRRVAQETCPAGSYCQEGVLFPCPPGTFGSLPGLSSSACSGPXXXXXXXPSGTSPSISTGKEVIGIACPAGRYGVEGMGXXXXXXXXXXXXXXXEESTSAREKECGSGSVFCPPESSAPVDVALGWFATGGDDESTRSGQVECIAATEGGGGTPPSGMSIVERCPDNTVGWNGTV 872          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A7S2WI84_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI84_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.480e-51
Identity = 157/410 (38.29%), Postives = 196/410 (47.80%), Query Frame = 1
Query:    7 GLSTVDCSGLCARGHYCPAGS------------------------------------TSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANAC--------GSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTK---CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFI-VDRCPDNTVGWNG 1092
            GL++  C+  C +GH+CP  S                                    TSA Q PC   RF A+    P L S         XXXXX              G+S  XXXXXX  P+ V +G+YT   G   K   G+  SLA  + R     CE   YC+ G +  CP GTFG++  LS++SCSG C  GY C   +S   +   CG    +CP GS    +V  GNYT GG P  R A+++C  G YC  G+RR C AG +G   GL SS CSG+C  G YCP+ + + T         C AGR+  AG     XXXXXXXXXXXX  S+V   +ECGS  LYCP GS  P  V+ G+Y+TG     RTGQ  C    TPP+ A   +  CP  T    G
Sbjct:   24 GLTSATCTSPCPQGHFCPEASVLPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSATQVPCRPGRFCAM----PGLESDLGNGDDNLXXXXXXXXXXXXXXXXXXXGASDVXXXXXXXLPTKVSLGYYT--TGPASK--PGEFQSLADAATRDSQEACEEATYCVDGVKTACPPGTFGATRALSSSSCSGLCAPGYYCPL-MSNNSQQRACGSVDVFCPLGSVVPTQVSPGNYTTGGAPHTRHAEQLCEPGHYCAGGLRRACRAGVYGSTYGLRSSDCSGACAPGYYCPEESVSATQ------FTCEAGRWSAAGAGTPLXXXXXXXXXXXXAGSDVPNKRECGSETLYCPVGSPKPFNVSRGYYSTGQNPRRRTGQVACNEQHTPPAGADRRISVCPSTTAPLQG 418          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D8M6U0_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6U0_BLAHO)

HSP 1 Score: 177 bits (450), Expect = 1.560e-45
Identity = 137/413 (33.17%), Postives = 174/413 (42.13%), Query Frame = 1
Query:    7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR----RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQG----TAADTHEL-----------------------------------------VVVGVA--CPAGRYGGA-GXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA--TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
            GLS   CSGLC  G+YCP GST+A                                      AN CGS           P  V  G+Y+  E          S + + +S +T C  G YC+ G +  CPAGT+GS+ GL+T+ CSG C AGY C AG + A   + CG    YCP GS S ++V  G Y+  GP  R    R  Q ICP G+YC++GV+  CPAGT+G   GLS+  CSG C AG YCP G    TA D   +                                          V GV   CPAG YG   G                   S  A A +CGS   YCPEGSG+P +V+ G+Y+      E  R+ Q  C +G    +   + + CP  T G
Sbjct: 1938 GLSNEQCSGLCEAGYYCPPGSTNAT-------------------------------------ANDCGSVDKYCPEGSGSPIDVSEGYYSGPE----------SSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLTTSECSGLCEAGYYCLAGSTNATAND-CGSVDKYCPEGSGSPIDVSEGYYS--GPESRNEANRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNG--VKNECPAGTYG 2298          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: D8LXS3_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LXS3_BLAHO)

HSP 1 Score: 177 bits (449), Expect = 2.140e-45
Identity = 137/413 (33.17%), Postives = 174/413 (42.13%), Query Frame = 1
Query:    7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR----RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQG----TAADTHEL-----------------------------------------VVVGVA--CPAGRYGGA-GXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA--TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
            GLST  CSGLC  G+YCP GST+A                                      AN CGS           P  V  G+Y+  E          S + + +S +T C  G YC+ G +  CPAGT+GS+ GL+T+ CSG C AGY C AG + A   + CG    YCP GS S ++V  G Y+  GP       R  Q ICP G+YC++GV+  CPAGT+G   GLS+  CSG C AG YCP G    TA D   +                                          V GV   CPAG YG   G                   S  A A +CGS   YCPEGSG+P +V+ G+Y+      E  R+ Q  C +G    +   + + CP  T G
Sbjct: 1663 GLSTEQCSGLCEAGYYCPPGSTNAT-------------------------------------ANDCGSVDKYCPEGSGSPIDVSEGYYSGPE----------SSNESNRSEQTICPIGSYCVNGVKNECPAGTYGSTEGLTTSQCSGLCEAGYYCLAGSTNATAND-CGSVDKYCPEGSGSPIDVSEGYYS--GPESENEANRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLSNEQCSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESENESNRSEQTICPIGSYCVNGVKNECPAGTYGSIEGLTTSECSGLCEAGYYCPPGSTNATANDCGSVDKYCPEGSGSPIDVSEGYYSGPESSNESNRSEQTICPIGSYCVNG--VKNECPAGTYG 2023          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: T0SA84_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SA84_SAPDV)

HSP 1 Score: 166 bits (421), Expect = 1.060e-44
Identity = 120/370 (32.43%), Postives = 160/370 (43.24%), Query Frame = 1
Query:    7 GLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR-RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYA-----TGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVGWNGTV 1098
            GL+T  C+ +C    YCP          CPA  +  +   TP                       CG          + P+ V  G+YT +   ++  G G +  L  +     CE G +C  G + PCPAGT+G + GLS+A+C+G CPAGY C  G +  L    C     YCP  +A+   V  G  T  G   R R+ Q +CP GTYC+ GVR  CP G++G   GLS+ ACSG+C  G  CP G  +    L      CPAG Y   G                   ++ A    CGS   YCP G+ AP  V AG+YA       G  +  TGQ  C +  T      +  +CP  T G+N  V
Sbjct:   27 GLTTKACAPVCTLS-YCPL-------PRCPAGYYCPLGAPTPI---------------------PCGGPTVFCPVGSSVPTLVTTGYYTIATRTLNPSGTGMTTGLVTRVAEVPCEVGTFCENGCKKPCPAGTYGMAHGLSSAACTGNCPAGYFCPLGSATYLD-TACVDPSVYCPGSNATPTPVTQGFLTTLGFDGRLRVGQTVCPLGTYCVRGVRHLCPWGSYGATTGLSTMACSGACAPGSTCPAGATSAQQAL------CPAGTYAINGKQCVPCRPGFWCSSGSPSPTQNA----CGSSSAYCPLGASAPLTVQAGYYAYSPNALSGANMDFTGQVLCNLQDT-----VLFPQCPSITTGFNSQV 351          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: T0QID9_SAPDV (Ephrin_rec_like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QID9_SAPDV)

HSP 1 Score: 154 bits (390), Expect = 1.030e-37
Identity = 111/350 (31.71%), Postives = 146/350 (41.71%), Query Frame = 1
Query:   37 CARGHYCPAGSTSAFQEPCPARRFGAVLEGT-PCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
            C  G+YC  G+ S    PCPA RFG   + T P   +                   CG+          +P  V  G Y+    D   G   D   +  +  +  CEPG +C  G R PCP G +GS++  ++  C+G C  G+ C  G S   +   CG A   C  GSAS   V +G Y+ G     R  Q  CP G+YC+DG    CP GT+G  P L+   CSG C  G YCP G+ A                                           A+A  CG+  +YCP GS  P  V+ G+Y TGGT  TR+GQA C MG        ++ +CP  T G
Sbjct:  640 CKPGYYCVQGARS----PCPAGRFGTSWKETNPLCTNACRRGHYCPVASAHDAVEPCGAPYLYCPSGSPYPVAVTAGFYSL---DSVAGLFSD---ITRRDAQAPCEPGSFCQYGLRYPCPGGRYGSAAQETSTLCTGLCQRGFYCPPGSSLPTQ-VACGNASVICRRGSASPEPVAVGYYSGGDTSPMRWYQLPCPLGSYCVDGTSFLCPGGTYGGVPQLTRPTCSGLCAPGYYCPTGSIA-------------------------------------------AQAFPCGNVSVYCPPGSPQPLAVSVGYYTTGGTNSTRSGQALCPMGSFCQHG--VLYQCPPGTFG 933          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A329T208_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T208_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.050e-35
Identity = 90/267 (33.71%), Postives = 131/267 (49.06%), Query Frame = 1
Query:  307 GDSWSLAGQSVRTK---CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVGWNGTV 1098
            G+S ++  Q+ R+    C+ G YC+ G +  CPAGT+G++ GLSTA+C+G CPAG+ C  G ++  +   C     +C  GS+    V IG +T+      R    ICP G++C+ GV+  CP GT+G   GL+S+ CSG C  G  CP+G+ +           CPAG Y   G                    + A    CG+   YCP GS +   V  G++A G    T T QA C++   P      + +CP  T G NG +
Sbjct:  308 GNSLAIRNQTTRSNQHICDKGSYCITGVKRLCPAGTYGATDGLSTAACTGPCPAGFYCPIGTADYSQ-HPCTLRTSFCRQGSSVPTAVDIGYFTMATQAGLRTDDTICPPGSFCVSGVQYLCPEGTYGATSGLTSNTCSGKCQDGYICPRGSISAKQS------PCPAGSYSRNGKFCAPCSPGYWCDVASPDPQQHA----CGADNAYCPLGSSSAQPVLDGYFAVGQRLNTHTSQALCILRNAPH-----LPQCPTRTTGVNGNL 558          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A6G0XDF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDF0_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.440e-35
Identity = 112/360 (31.11%), Postives = 147/360 (40.83%), Query Frame = 1
Query:   34 LCARGHYCPAGSTSAFQEPCPARRFGAVL-EGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIA---------QEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
            LC  G++C  G     + PCPA R+GA   E                       A ACG +         +P PV  G+Y+     VD   +G +     +  +  CE GYYC+ G R PCP G +GS +  +   C+G C  G+ C    +   +   CGG+   C TGSA+ ++V  G Y+ G    R  A         Q  C  G YC +GV+ PCPAGT G  P L++ ACSG CPAG  CP  ++  T                                           A +CG   L+CP GS  P  V AG+Y TG    TRT QA C +G        I   CP  T G
Sbjct:  740 LCEAGYFCQQG----LRSPCPAGRYGAASGETNSSCTGACIGGFFCPVASTNSSARACGGAHLYCPPGSPYPVPVSSGYYS-----VDST-LGLNSDPTRRDAQLPCEIGYYCVHGQRYPCPGGRYGSIARETNPLCTGLCRRGFYCPPNSTSPTQ-ILCGGSNLICRTGSAAPIQVSPGYYS-GSDTTRSDAVNRETMRWFQRPCDPGFYCQNGVQYPCPAGTFGSTPQLTTPACSGLCPAGYVCPPSSSNST-------------------------------------------AIQCGDVSLFCPVGSDVPRRVRAGFYTTGNLNATRTAQALCDVGHFCQGG--IRYECPSGTYG 1042          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: W4FJV2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJV2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 6.140e-35
Identity = 88/240 (36.67%), Postives = 112/240 (46.67%), Query Frame = 1
Query:   25 CSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTYSEGDVDKGGIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCP 744
            C+G+C RG YCPA STSA QEP                                     CG S          P  V  G+Y+ S  D  +       S+  +  +  CEPGYYC+ G R PCP GTFGS+  L T  CSG+C AGY C    + A +   CG    +CP GS++ L V  G Y+VG     R+ Q +C  G +C  G+   CP GT+G  PGL+   C+G C AG YCP
Sbjct:  765 CTGVCRRGFYCPASSTSATQEP-------------------------------------CGGSNVVCRTGSVAPIGVFAGYYSGS--DTTRADAVTRESM--RWFQKPCEPGYYCVNGVRNPCPTGTFGSTGQLVTPFCSGKCSAGYYCTQASTSATQ-IMCGDVSVFCPVGSSAPLAVDAGYYSVGATNSTRVGQALCNVGQFCRGGIAYDCPQGTYGDIPGLTVGQCTGWCAAGFYCP 962          
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Match: A0A2P4YK08_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK08_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.880e-34
Identity = 111/376 (29.52%), Postives = 155/376 (41.22%), Query Frame = 1
Query:   37 CARGHYCPAGSTSAFQEPCPARRFG-AVLEGTPCLASXXXXXXXXXXXXXXPRANACGSSAXXXXXXXAFPSPVDVGHYTY------------SEGDVDKGGIGDSWSLAGQSVRTK-----CEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQCPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDRRIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQGTAADTHELVVVGVACPAGRYGGAGXXXXXXXXXXXXXXXXXXXSEVARAQ-ECGSGKLYCPEGSGA-PAEVNAGWYAT-------GGTELTRTGQAECMMGKTPPSAAFIVDRCPDNTVG 1083
            C RG+YC  G     + PCPA  +G   LE     +                 A  CG +        A P PV  G+Y+             +    +K  +  +   A ++   +     CEPG YC+ G +  CP G +G  SG ++  C+G C  GY C  G S + + E CGG+ F C +GS +   V  G Y++G     R  Q+ C  G++C+DGV+ PCPAGT G   GLS++ACSG C  G YCP                                             S ++R Q ECGS  +YCPEG+G  P  V++G+Y+         G   T+     C  G        I  RCP+ T G
Sbjct:  409 CERGYYCRDG----VRSPCPAGYYGDGNLETRSTCSGVCSSGFYCPLASWNSTARVCGDANVFCPSGSAVPLPVWSGYYSVRLLPFGADRLLVANAGSEKYSVSSTGEEAPKNEAIRDGQRICEPGTYCIDGKKYLCPVGRYGDQSGETSPLCAGLCSRGYRCPEGSSSSTQLE-CGGSNFVCGSGSPAPQLVHPGYYSIGPTATTRFFQQPCELGSFCIDGVKYPCPAGTFGATSGLSTAACSGKCAPGYYCPP--------------------------------------------SSISRTQNECGSSSVYCPEGTGKEPRFVSSGYYSVLTSGMVDDGRNATQNDMKICPKGFYCRQGIRI--RCPEGTYG 733          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108751.711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP6_ECTSI5.380e-9948.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WI84_9STRA4.480e-5138.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8M6U0_BLAHO1.560e-4533.17Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
D8LXS3_BLAHO2.140e-4533.17Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
T0SA84_SAPDV1.060e-4432.43Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
T0QID9_SAPDV1.030e-3731.71Ephrin_rec_like domain-containing protein n=1 Tax=... [more]
A0A329T208_9STRA3.050e-3533.71Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A6G0XDF0_9STRA3.440e-3531.11Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
W4FJV2_9STRA6.140e-3536.67Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A2P4YK08_9STRA5.880e-3429.52Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108751contigH-elongata_contig108751:139..2168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.4
Seed ortholog evalue7.9e-40
Seed eggNOG ortholog112098.XP_008606979.1
EggNOG OGs2EBYZ@1,2SHY9@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1113
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108751.711.1prot_H-elongata_contig108751.711.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig108751 139..2168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929615.1437533-CDS-H-elongata_contig108751:138..2561622929615.1437533-CDS-H-elongata_contig108751:138..256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 139..256 +
1691679092.1048434-CDS-H-elongata_contig108751:138..2561691679092.1048434-CDS-H-elongata_contig108751:138..256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 139..256 +
1622929615.1591828-CDS-H-elongata_contig108751:777..10021622929615.1591828-CDS-H-elongata_contig108751:777..1002Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 778..1002 +
1691679092.1160557-CDS-H-elongata_contig108751:777..10021691679092.1160557-CDS-H-elongata_contig108751:777..1002Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 778..1002 +
1622929615.1754014-CDS-H-elongata_contig108751:1196..14651622929615.1754014-CDS-H-elongata_contig108751:1196..1465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 1197..1465 +
1691679092.1265721-CDS-H-elongata_contig108751:1196..14651691679092.1265721-CDS-H-elongata_contig108751:1196..1465Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 1197..1465 +
1622929615.1987507-CDS-H-elongata_contig108751:1667..21681622929615.1987507-CDS-H-elongata_contig108751:1667..2168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 1668..2168 +
1691679092.1424253-CDS-H-elongata_contig108751:1667..21681691679092.1424253-CDS-H-elongata_contig108751:1667..2168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108751 1668..2168 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig108751.711.1

>prot_H-elongata_contig108751.711.1 ID=prot_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
MGGLSTVDCSGLCARGHYCPAGSTSAFQEPCPARRFGAVLEGTPCLASLC
DAGYYCPPGSTSPRANACGSSAYFCPRGSAFPSPVDVGHYTYSEGDVDKG
GIGDSWSLAGQSVRTKCEPGYYCLGGARIPCPAGTFGSSSGLSTASCSGQ
CPAGYVCRAGLSEALRGERCGGAQFYCPTGSASRLEVGIGNYTVGGPPDR
RIAQEICPTGTYCLDGVRRPCPAGTHGYAPGLSSSACSGSCPAGRYCPQG
TAADTHELVVVGVACPAGRYGGAGMASAACAGPCEAGYYCPAGSEVARAQ
ECGSGKLYCPEGSGAPAEVNAGWYATGGTELTRTGQAECMMGKTPPSAAF
IVDRCPDNTVGWNGTVVNNG*
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mRNA from alignment at H-elongata_contig108751:139..2168+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig108751.711.1 ID=mRNA_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2030bp|location=Sequence derived from alignment at H-elongata_contig108751:139..2168+ (Himanthalia elongata Himel1 dioecious)
ATGGGAGGATTATCAACGGTGGACTGTTCTGGTCTCTGCGCACGAGGTCA CTACTGTCCCGCGGGCAGCACAAGCGCTTTTCAAGAACCCTGCCCAGCGA GAAGATTCGGCGCCGTACGTGGACTCGGAGACGGGCTGTGTGCTGAGGTG TAACCGTTTTGGGTGGCATCGTGGAGGTATCGGCGGTGAAAACGCACTCT TGTTGACGACCGCGACCCATTCACGACAAATCACGTTCCTCCGTAGCATT GTCGCGGAAAACGTGTAACTGCAAGAGCACTAACTTTTATGTCCATGCTC AACTCAATGGGAGGCCCAATGATTTTTTTTTGTCATATTTGGTCATAAGA ATGGCTCTAAGAAAGCTCGGATTATTTTTTTCTAGACATTTACTCTGTGC GGTGGGGTTAAAGTTAGCGTCAACCATGGTACATTTTTTTATGTATAGAG ACTGAACATCGGTCAACCATTGTTTTTTATAACGCAGGTTACAAGCAACA CACACACATGAACACAGATCAACGGCTGTTGGCTAGAAAATTGCCACTAT GAATAAGACAGTACGCACCACTTGTTATTCTCAAGCCACGCGTCTCGGTT GCCACAACCCGGTTGGGCAGGAACATGTTTGCGCAAGAGTAGAAGGCACC CCTTGCCTCGCTTCCCTCTGCGACGCGGGATACTACTGCCCTCCCGGCAG CACGTCGCCCCGGGCGAATGCTTGCGGCTCGAGCGCGTACTTCTGCCCTC GGGGATCCGCGTTCCCTTCTCCGGTGGACGTGGGGCACTACACGTATTCT GAAGGCGACGTGGACAAAGGGGGTATCGGCGACTCGTGGTCGCTAGCAGG GCAATCGGTGAGAAGTACTTCGGCAGATGCGACCACCATAACTTGCCGCC CAATTCCTTGAATGGCTTCAGCGCCCCGACGCTGGCATACATTTTTTAAT AATTTAGGTGTAAGGTACTCATACAGCTGTCCGTTTTATTATAACCTAAA AATATTCCCCGCAACTCTCAAATACCCTTTCCCTCGCAGAAGACACACAC CTCTCAAGCGAAGTGCGAACCCGGATATTACTGCTTAGGCGGCGCGCGTA TTCCGTGCCCGGCGGGAACATTTGGCTCATCGTCAGGCCTTTCAACGGCC TCTTGCTCGGGGCAGTGTCCCGCGGGTTACGTCTGTCGCGCGGGTTTGTC AGAGGCCCTCCGTGGCGAGCGATGTGGGGGGGCTCAGTTTTACTGTCCTA CTGGATCCGCTTCCCGCTTGGAGGTAGGTATAGGTAACTACACCGTCGGC GGGCCGCCGGACAGACGCATTGCACAGGTGAGAAATATGGCGGCGCGGGA ACATCTAAGACGGAACTCGTTTAGCACATCGTTCAGGCTGTGGGGTTGTC GAGGGTTTAAGACGATTTTCGCGCGCGTGACAGGGCAATATATATATATA CACGAGTGTGCCCTCGACCATCAGACACCCTCTGGCGACAGACGTCCCAC TCCCACCATCTCATTCTGGCGTCGCTTAGGAGATCTGTCCAACAGGCACG TATTGTTTGGATGGCGTACGCCGACCATGCCCGGCGGGAACGCACGGTTA TGCGCCGGGTCTCTCATCGTCGGCGTGCTCAGGGTCGTGCCCAGCCGGCC GATACTGCCCCCAAGGAACCGCAGCGGACACACACGAACTCGTCGTGGTG GGTGTCGCGTGTCCCGCAGGGCGGTACGGTGGGGCTGGGATGGCAAGTGC GGCATGCGCGGGTCCTTGCGAAGCGGGCTACTATTGCCCAGCGGGATCCG AGGTCGCGCGCGCGCAGGAGTGTGGATCTGGAAAACTTTACTGTCCGGAA GGGTCAGGAGCTCCAGCAGAAGTAAACGCCGGGTGGTACGCCACCGGCGG GACGGAGCTGACGCGGACGGGACAGGCGGAATGCATGATGGGGAAAACAC CACCCTCGGCAGCGTTTATAGTGGATAGGTGTCCGGATAACACCGTCGGC TGGAACGGAACGGTAGTAAACAATGGATGA
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Coding sequence (CDS) from alignment at H-elongata_contig108751:139..2168+

>mRNA_H-elongata_contig108751.711.1 ID=mRNA_H-elongata_contig108751.711.1|Name=mRNA_H-elongata_contig108751.711.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig108751:139..2168+ (Himanthalia elongata Himel1 dioecious)
ATGGGAGGATTATCAACGGTGGACTGTTCTGGTCTCTGCGCACGAGGTCA
CTACTGTCCCGCGGGCAGCACAAGCGCTTTTCAAGAACCCTGCCCAGCGA
GAAGATTCGGCGCCGTACATGGGAGGATTATCAACGGTGGACTGTTCTGG
TCTCTGCGCACGAGGTCACTACTGTCCCGCGGGCAGCACAAGCGCTTTTC
AAGAACCCTGCCCAGCGAGAAGATTCGGCGCCGTACTAGAAGGCACCCCT
TGCCTCGCTTCCCTCTGCGACGCGGGATACTACTGCCCTCCCGGCAGCAC
GTCGCCCCGGGCGAATGCTTGCGGCTCGAGCGCGTACTTCTGCCCTCGGG
GATCCGCGTTCCCTTCTCCGGTGGACGTGGGGCACTACACGTATTCTGAA
GGCGACGTGGACAAAGGGGGTATCGGCGACTCGTGGTCGCTAGCAGGGCA
ATCGGTGAGAATAGAAGGCACCCCTTGCCTCGCTTCCCTCTGCGACGCGG
GATACTACTGCCCTCCCGGCAGCACGTCGCCCCGGGCGAATGCTTGCGGC
TCGAGCGCGTACTTCTGCCCTCGGGGATCCGCGTTCCCTTCTCCGGTGGA
CGTGGGGCACTACACGTATTCTGAAGGCGACGTGGACAAAGGGGGTATCG
GCGACTCGTGGTCGCTAGCAGGGCAATCGGTGAGAACGAAGTGCGAACCC
GGATATTACTGCTTAGGCGGCGCGCGTATTCCGTGCCCGGCGGGAACATT
TGGCTCATCGTCAGGCCTTTCAACGGCCTCTTGCTCGGGGCAGTGTCCCG
CGGGTTACGTCTGTCGCGCGGGTTTGTCAGAGGCCCTCCGTGGCGAGCGA
TGTGGGGGGGCTCAGTTTTACTGTCCTACTGGATCCGCTTCCCGCTTGGA
GGTAGGTATAGGTAACTACACCGTCGGCGGGCCGCCGGACAGACGCATTG
CACAGCGAAGTGCGAACCCGGATATTACTGCTTAGGCGGCGCGCGTATTC
CGTGCCCGGCGGGAACATTTGGCTCATCGTCAGGCCTTTCAACGGCCTCT
TGCTCGGGGCAGTGTCCCGCGGGTTACGTCTGTCGCGCGGGTTTGTCAGA
GGCCCTCCGTGGCGAGCGATGTGGGGGGGCTCAGTTTTACTGTCCTACTG
GATCCGCTTCCCGCTTGGAGGTAGGTATAGGTAACTACACCGTCGGCGGG
CCGCCGGACAGACGCATTGCACAGGAGATCTGTCCAACAGGCACGTATTG
TTTGGATGGCGTACGCCGACCATGCCCGGCGGGAACGCACGGTTATGCGC
CGGGTCTCTCATCGTCGGCGTGCTCAGGGTCGTGCCCAGCCGGCCGATAC
TGCCCCCAAGGAACCGCAGCGGACACACACGAACTCGTCGTGGTGGGTGT
CGCGTGTCCCGCAGGGCGGTACGGTGGGGCTGGGATGGCAAGTGCGGCAT
GCGCGGGTCCTTGCGAAGCGGGCTACTATTGCCCAGCGGGATCCGAGGTC
GCGCGCGCGCAGGAGTGTGGATCTGGAAAACTTTACTGTCCGGAAGGGTC
AGGAGCTCCAGCAGAAGTAAACGCCGGGTGGTACGCCACCGGCGGGACGG
AGCTGACGCGGACGGGACAGGCGGAATGCATGATGGGGAAAACACCACCC
TCGGCAGCGTTTATAGTGGATAGGTGTCCGGATAACACCGTCGGCTGGAA
CGGAACGGTAGTAAACAATGGATGAGAGATCTGTCCAACAGGCACGTATT
GTTTGGATGGCGTACGCCGACCATGCCCGGCGGGAACGCACGGTTATGCG
CCGGGTCTCTCATCGTCGGCGTGCTCAGGGTCGTGCCCAGCCGGCCGATA
CTGCCCCCAAGGAACCGCAGCGGACACACACGAACTCGTCGTGGTGGGTG
TCGCGTGTCCCGCAGGGCGGTACGGTGGGGCTGGGATGGCAAGTGCGGCA
TGCGCGGGTCCTTGCGAAGCGGGCTACTATTGCCCAGCGGGATCCGAGGT
CGCGCGCGCGCAGGAGTGTGGATCTGGAAAACTTTACTGTCCGGAAGGGT
CAGGAGCTCCAGCAGAAGTAAACGCCGGGTGGTACGCCACCGGCGGGACG
GAGCTGACGCGGACGGGACAGGCGGAATGCATGATGGGGAAAACACCACC
CTCGGCAGCGTTTATAGTGGATAGGTGTCCGGATAACACCGTCGGCTGGA
ACGGAACGGTAGTAAACAATGGATGA
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