mRNA_H-elongata_contig10864.702.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A6H5KSX3_9PHAE (ATP-grasp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSX3_9PHAE) HSP 1 Score: 328 bits (841), Expect = 2.430e-105 Identity = 185/303 (61.06%), Postives = 214/303 (70.63%), Query Frame = 1
Query: 1 MSAFE-------AGESDAPTAGVIVVDPFCDYLGKRCMEILEGAGYAVVISEHLVSTMGREGAERFRPPAPGGEAEWAAWLPFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLE------PSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRP---KKPATPLGPGKIKG--GREEAVTASDGR-PGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHKA 852
MSAFE A E AP AGVIVVDPFCDYLGKRC++ILE AGYAVV+S+HLV+T+ + A+ FRPP+PG EAEWA+WLPFP++ V CESDAGLA AERLQAALLGPRFGG+N+ARRDK+LMNE +R AGL A RQ KTGD +K R FL+TLE P +P R P + G RE + G+ P + L K G G E+ DG PG V SVVKPARGCASG+VF C+GE EA EAF KI GTPKYGTPG NDEV++QEFLVGTE+VVDTVSRDG HKA
Sbjct: 105 MSAFEDAETGSEAEEGGAPVAGVIVVDPFCDYLGKRCIDILEEAGYAVVLSDHLVATLNSDSAKGFRPPSPGKEAEWASWLPFPIVAVVCESDAGLANAERLQAALLGPRFGGINDARRDKFLMNEAMRTAGLAAARQIKTGDRAKVRQFLATLETTTTASPPTPARQQPSQQLEQTGGREVAAD--TDGDLAAPTPEENSGNVLAEAKGLGSRGEEQEEDGGDGNSPG--VLSVVKPARGCASGSVFRCQGEHEAMEAFDKIFGTPKYGTPGEFNDEVLVQEFLVGTEYVVDTVSRDGEHKA 403
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: W7TSP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP4_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.350e-28 Identity = 95/274 (34.67%), Postives = 134/274 (48.91%), Query Frame = 1
Query: 49 IVVDPFCDYLGKRCMEILEGAGYAV--VISEHLVSTMGREGAERFRPPAPGGEAEWAAWLP-FPLLG-VFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFL-STLEPSSPVRSIP--PSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHK 849
+++DPF +LG+ + G V+S + V+++ ++G ++R P PG E +WAA LP F + V ESD G ATAER+ AA+ P GVN RR+KYL N ++ G+ RQ W +A F+ + L P+ P SI PS S P +VVKP RG ASG+V +C+ R AF I +PKYG G VN +V+LQE+L+G E+ VDTVS +G+HK
Sbjct: 221 VIIDPFSPFLGRYLKRRAQAMGLVCIDVLSPYTVASL-QDGPRKWRAPWPGAEKKWAAHLPAFKRVAFVLSESDHGAATAERMHAAVGAP-GNGVNPTRRNKYLTNRALQARGVGYTRQILAETWEEAEAFVRNQLLPTHPTSSISATPSFSSXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXPSSVPLAVVKPVRGAASGDVHVCQDLPSIRIAFQAIKDSPKYG--GGVNTQVLLQEYLLGEEFAVDTVSCNGSHK 475
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A7S3WCA1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WCA1_EMIHU) HSP 1 Score: 117 bits (292), Expect = 3.720e-27 Identity = 99/288 (34.38%), Postives = 119/288 (41.32%), Query Frame = 1
Query: 31 APTAGVIVVDPFCD---YLGKRCMEILEGAG----------YAVVISEHLVSTMGREGAERFRPPAPGGEAEWA--AWLPFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHK 849
APT ++ +CD Y G+ E E G YA ++SE L R +R PA G EA WA A + GV C SDAGLATAERLQ AL+ R G+ ARRDKYLM+E +R AGL A RQ+ W +AR FLSTL P P+R V+KP RG A V L E +AR +L + + QE L G EWVVDTVSR G HK
Sbjct: 44 APTGAALI---YCDPVGYEGRYFREACEARGVLLVRLWSTPYAAMLSEDLEDAEERAAIQRGCAPAAGEEAAWAESALSGMAITGVLCGSDAGLATAERLQHALVPARTNGLVPARRDKYLMHEALRTAGLAAARQSVVRSWEEARSFLSTLPP--PLR------------------------------------------------------------VVLKPRRGHAGLRVGLASSEPQARHMVETLLAE-RVSLDTEAEGGALCQEVLEGEEWVVDTVSRAGEHK 265
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: R1F9Z0_EMIHU (ATP-grasp domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F9Z0_EMIHU) HSP 1 Score: 117 bits (292), Expect = 2.470e-26 Identity = 99/288 (34.38%), Postives = 119/288 (41.32%), Query Frame = 1
Query: 31 APTAGVIVVDPFCD---YLGKRCMEILEGAG----------YAVVISEHLVSTMGREGAERFRPPAPGGEAEWA--AWLPFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHK 849
APT ++ +CD Y G+ E E G YA ++SE L R +R PA G EA WA A + GV C SDAGLATAERLQ AL+ R G+ ARRDKYLM+E +R AGL A RQ+ W +AR FLSTL P P+R V+KP RG A V L E +AR +L + + QE L G EWVVDTVSR G HK
Sbjct: 13 APTGAALI---YCDPVGYEGRYFREACEARGVLLVRLWSTPYAAMLSEDLEDAEERAAIQRGCAPAAGEEAAWAESALSGMAITGVLCGSDAGLATAERLQHALVPARTNGLVPARRDKYLMHEALRTAGLAAARQSVARSWEEARSFLSTLPP--PLR------------------------------------------------------------VVLKPRRGHAGLRVGLASSEPQARHMVETLLAE-RVSLDTEAEGGALCQEVLEGEEWVVDTVSRAGEHK 234
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A7S3V442_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V442_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.330e-24 Identity = 99/302 (32.78%), Postives = 138/302 (45.70%), Query Frame = 1
Query: 19 GESDAPTAGVIVVDPFCDY----LGKRCMEILEGAGYAVVISEHLVSTMGR--------EGAER------FRPPAPGGEAEWAAWLP--FPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVAS----VVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYG-TPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHK 849
G S P ++ +D FC+Y L + ++ G VIS ++ M R G + R P+P ++W LP ++ CESD+GL AE L A+ G NEARRDK+LMNE K GL V+Q +A F + L V PSL S E+ S LK S + GR T+S R KE S ++KP RG AS +V C + + AF KI GT +G T G ++ V++QEF VGTE+ +D +S++G HK
Sbjct: 145 GASKPPKFALLFMDKFCNYHGGYLASKARDVY-GVATIDVISSYIAGYMLRAVNDDMESNGQDEQSSILSMRLPSPDQLSQWKQKLPRGIQIIAAICESDSGLGEAELLGDAISVRYHNGYNEARRDKFLMNEVAAKHGLRTVQQKLCASLDEANAFATELG----VGQSHPSLDYT--SEEDCSD--LKASSALSLSGTEDIRAENFNTGRLGGTTSSHHRLQKEDRSWKYCIIKPTRGVASDDVHFCSNLEQVKAAFEKIQGTSIFGSTSGERHNSVLVQEFAVGTEYAIDIISKNGEHK 437
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A7S4B789_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B789_CHRCT) HSP 1 Score: 97.4 bits (241), Expect = 2.850e-19 Identity = 89/266 (33.46%), Postives = 107/266 (40.23%), Query Frame = 1
Query: 67 CDYLGKRCMEILEGAGYAVVISEHLVSTMGR-EGAERFRPPAPGGEAEWAAWL--PFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAV-NDEVVLQEFLVGTEWVVDTVSRDGNHKA 852
C+ G + ++ L A YA +I +V + E P E EWA FP+LGV C SDAGLATAERLQ L R G+ ARRDK MNE + AGL Q W +A FL+ L PA PL +VVKP RG +S V L +AR +L TP V +LQE+L G EWVVDTVSR G HKA
Sbjct: 53 CELQGLKTVQ-LWSAPYAEMIRNRMVLNDEQIEHLASHTAPPENFETEWAQQNLEEFPVLGVLCGSDAGLATAERLQHVLTPSRSNGILSARRDKLQMNEALSAAGLSTAAQASISSWEEAEAFLTAL-------------------------------------PA-PL------------------------HAVVKPRRGQSSLRVGLATSLSQARHMVNALLETPTSLDSSEVPRGSALLQEYLRGDEWVVDTVSRAGEHKA 255
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A7S1TTP0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTP0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.850e-19 Identity = 89/285 (31.23%), Postives = 116/285 (40.70%), Query Frame = 1
Query: 46 VIVVDPFCDYLGKRCMEILE---GAGYAVVISEHLVSTMG-REGAE---RFRPPAP-GGE---------AEWAAWLPFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHK 849
V++VD Y G+ +E E G A V+S +L + R GAE FR P P GE WAA P P+ V C+SD+GLA AE A L GVNEARRDKYLM+E +R GL Q D F + L S GR +++KP RG S V +C E R AF ++GT ++ + A N E ++QEF+ G E+ VDTVS G H+
Sbjct: 78 VVLVDALGGYHGRTLVERAEEEYNLGVATVLSPYLQRILEERNGAELPPHFRLPQPIRGENGDLNFAPVRRWAAAQP-PVRAVLCDSDSGLAAAEAFAAGLDSIPNNGVNEARRDKYLMHEALRARGLRCAEQRVCADVESCLEFCADLFAS----------------------------------------------GRR---------------AIMKPRRGVGSELVHVCETPAEVRAAFESLVGTAQFASLEARNREALVQEFIEGPEYAVDTVSAGGAHR 300
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A7S3WBL1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WBL1_EMIHU) HSP 1 Score: 90.1 bits (222), Expect = 3.290e-18 Identity = 62/145 (42.76%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 31 APTAGVIVVDPFCD---YLGKRCMEILEGAG----------YAVVISEHLVSTMGREGAERFRPPAPGGEAEWA--AWLPFPLLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKA 420
APT ++ +CD Y G+ E E G YA ++SE L R +R PA G EA WA A + GV C SDAGLATAERLQ AL+ R G+ ARRDKYLM+E +R AGL A RQ+ W +A
Sbjct: 44 APTGAALI---YCDPVGYEGRYFREACEARGVLLVRLWSTPYAAMLSEDLEDAEERAAIQRGCAPAAGEEAAWAESALSGMAITGVLCGSDAGLATAERLQHALVPARTNGLVPARRDKYLMHEALRTAGLAAARQSVVRSWEEA 185
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: A0A835ZA87_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA87_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.750e-18 Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 604 VTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEVVLQEFLVGTEWVVDTVSRDGNHKA 852
A+ R + V+KP RGCASG+VFLC E EAR A I+G+P Y TPGAVN E ++Q+FL G E+VVDTVS G HKA
Sbjct: 32 AAAAGARDDRWAPLVIKPLRGCASGDVFLCATEVEARNALDTIVGSPLYATPGAVNREALVQDFLEGVEYVVDTVSCKGAHKA 114
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Match: R1DSR1_EMIHU (ATP-grasp domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DSR1_EMIHU) HSP 1 Score: 91.3 bits (225), Expect = 3.270e-17 Identity = 81/230 (35.22%), Postives = 99/230 (43.04%), Query Frame = 1
Query: 184 PAPGGEAEWAAW-LPFP--LLGVFCESDAGLATAERLQAALLGPRFGGVNEARRDKYLMNEKVRKAGLMAVRQTKTGDWSKARHFLSTLEPSSPVRSIPPSLSKPPGSRENPSQGGLKGESIRPKKPATPLGPGKIKGGREEAVTASDGRPGKEVASVVKPARGCASGNVFLCRGEGEAREAFYKILGTPKYGTPGAVNDEV----VLQEFLVGTEWVVDTVSRDGNHKA 852
P G E WA+ LP L GV C S+AGL+TAER+QAAL+ R GV ARRDK LMN + GL+ DW PP+ PP S + +PA ++G R V+KP RG V L E AR AF + P + +DEV +LQE+L G EWVVDT SRDG HKA
Sbjct: 79 PKNGEEVAWASSRLPAGTCLGGVLCGSEAGLSTAERMQAALVPERSNGVCPARRDKLLMNRALAGHGLLTAATASPSDWRP-----------------PPAAIHPPDSSKL--------------QPAAEAFIRSLRGNRV----------------VLKPRRGTGGCGVALACDEAHARRAFEALQA------PFSPDDEVAAAPLLQEYLAGEEWVVDTASRDGEHKA 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10864.702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10864.702.1 >prot_H-elongata_contig10864.702.1 ID=prot_H-elongata_contig10864.702.1|Name=mRNA_H-elongata_contig10864.702.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp MSAFEAGESDAPTAGVIVVDPFCDYLGKRCMEILEGAGYAVVISEHLVSTback to top mRNA from alignment at H-elongata_contig10864:1885..4123+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10864.702.1 ID=mRNA_H-elongata_contig10864.702.1|Name=mRNA_H-elongata_contig10864.702.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2239bp|location=Sequence derived from alignment at H-elongata_contig10864:1885..4123+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10864:1885..4123+ >mRNA_H-elongata_contig10864.702.1 ID=mRNA_H-elongata_contig10864.702.1|Name=mRNA_H-elongata_contig10864.702.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1722bp|location=Sequence derived from alignment at H-elongata_contig10864:1885..4123+ (Himanthalia elongata Himel1 dioecious)back to top |