prot_H-elongata_contig108135.663.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108135.663.1
Unique Nameprot_H-elongata_contig108135.663.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: D8LC24_ECTSI (Eukaryotic translation initiation factor 2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC24_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.080e-55
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAAAGVG 101
            MDFWDVNRKK+MGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPV K+E+ VL+DAVW+PA   VYPDRPASPGRKG   ADAAAG G
Sbjct:  367 MDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKKEVEVLWDAVWQPAAQGVYPDRPASPGRKGPTAADAAAGRG 467          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A836C9Y7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.720e-40
Identity = 67/99 (67.68%), Postives = 76/99 (76.77%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAAAG 99
            MDFWD  R K++GS +SHCAV YGWSPDSR+F+TATCAPRMNVDN V VF+Y+GSGPV  R ++ LYDA WRPA    Y DR ASPGRKG     AAAG
Sbjct:  379 MDFWDTRRSKLLGSAASHCAVKYGWSPDSRYFMTATCAPRMNVDNGVHVFKYNGSGPVYSRAVDTLYDACWRPAAEGTYQDRAASPGRKGPDSKKAAAG 477          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A7S2W6Z7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6Z7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.110e-37
Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGR------KGSAIADAAA 98
            MDFWDVN++K MGS ++HCAV +GWSPDSR+F+TAT APRMNVDN VK+FRY+G+GP+ +     L+DA WRPALP VYPDRP SP R      KGS  A AAA
Sbjct:  240 MDFWDVNKQKKMGSNTAHCAVGFGWSPDSRFFMTATLAPRMNVDNGVKIFRYNGAGPIFELPQTQLFDAKWRPALPGVYPDRPQSPTRRNENQGKGSQAAAAAA 343          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A7S2W6T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6T5_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.260e-37
Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGR------KGSAIADAAA 98
            MDFWDVN++K MGS ++HCAV +GWSPDSR+F+TAT APRMNVDN VK+FRY+G+GP+ +     L+DA WRPALP VYPDRP SP R      KGS  A AAA
Sbjct:  372 MDFWDVNKQKKMGSNTAHCAVGFGWSPDSRFFMTATLAPRMNVDNGVKIFRYNGAGPIFELPQTQLFDAKWRPALPGVYPDRPQSPTRRNENQGKGSQAAAAAA 475          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A7S2Y000_9STRA (Eukaryotic translation initiation factor 2A (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y000_9STRA)

HSP 1 Score: 127 bits (320), Expect = 8.090e-34
Identity = 54/99 (54.55%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAAAG 99
            MDFWD+N+KK+MG+ + HCAV +GW+PDSR+F+ +T  PRMNVDN +K+F+Y+G GPV ++  + L+ A W PA   VYPDRP SP  KG    +A AG
Sbjct:  186 MDFWDINKKKMMGTNTCHCAVGFGWAPDSRYFMASTLTPRMNVDNGIKIFKYNGIGPVIEKAEDQLFQADWVPAAAGVYPDRPQSPRPKGEKAEEANAG 284          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: W7TR14_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR14_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.460e-31
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREIN--VLYDAVWRPALPNVYPDRPASPGRKG 90
            MDFWD N++K+MG  +SHC+V YGWSP  R+F+TAT APRMNVDN VK+F+Y+G+GP+ K E     L+DA +RPA   V+PDRPA+P RKG
Sbjct:  381 MDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAEFEDATLFDASFRPAAGGVFPDRPATPPRKG 472          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A8K1CP96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP96_PYTOL)

HSP 1 Score: 121 bits (303), Expect = 6.200e-30
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAA 97
            MDFWD N+ K MGS +S+ A  + WSPDSR+F TAT  PR+ VDN  KVF+YDG+GP+ + +   LYD  +RPALP+VYP+RP SP +KG   A AA
Sbjct:  355 MDFWDRNKLKKMGSANSNSATCFAWSPDSRYFFTATTFPRLRVDNGFKVFKYDGTGPIYQEDRGELYDMKFRPALPDVYPNRPQSPRKKGEEAASAA 451          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A2D4BSZ9_PYTIN (Eukaryotic translation initiation factor 2A n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSZ9_PYTIN)

HSP 1 Score: 120 bits (302), Expect = 7.490e-30
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIA 94
            MDFWD N+ K MGS +S+ A  + WSPDSR+F+TAT  PR+ VDN  KVFRYDG+GP+ + +   LYD  +RPALP+VYP+RP SP RKG   A
Sbjct:  348 MDFWDRNKLKKMGSANSNSATTFTWSPDSRYFVTATTFPRLRVDNGFKVFRYDGTGPIHQEDRGELYDLKFRPALPDVYPNRPQSPRRKGEEAA 441          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A6G0X7T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7T5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.250e-29
Identity = 56/98 (57.14%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAAA 98
            MDFWD N+ K +GST S CA  YGWSPDSR+F TAT  PR+ VDN  K+F+YDG+GPV       LYD  +RPA   VYP+RPASP  K +    AAA
Sbjct:  356 MDFWDRNKLKKLGSTKSECATCYGWSPDSRYFATATTHPRVRVDNGFKIFKYDGTGPVVSEARPELYDLQFRPAATGVYPNRPASPRSKDAEAVAAAA 453          
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Match: A0A3R7JX70_9STRA (Eukaryotic translation initiation factor 2A n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JX70_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.210e-28
Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    1 MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKG 90
            MDFW+ N+ K MGS +S+ A  + WSPDSR+F TAT  PR+ VDN  KVFRYDG+GP+ + E   LYD  +RPA P+ YP+RP SP RKG
Sbjct:  635 MDFWERNKLKKMGSATSNSATTFAWSPDSRYFATATTFPRLRVDNGFKVFRYDGAGPIHQEERGELYDLQFRPAAPDTYPNRPQSPRRKG 724          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108135.663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC24_ECTSI1.080e-5586.14Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A836C9Y7_9STRA7.720e-4067.68Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A7S2W6Z7_9STRA1.110e-3764.42Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A7S2W6T5_9STRA3.260e-3764.42Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A7S2Y000_9STRA8.090e-3454.55Eukaryotic translation initiation factor 2A (Fragm... [more]
W7TR14_9STRA1.460e-3160.87Eukaryotic translation initiation factor 2A n=2 Ta... [more]
A0A8K1CP96_PYTOL6.200e-3056.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BSZ9_PYTIN7.490e-3058.51Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A6G0X7T5_9STRA5.250e-2957.14Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A3R7JX70_9STRA3.210e-2857.78Eukaryotic translation initiation factor 2A n=4 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 1..68
e-value: 2.6E-16
score: 60.1
IPR011387Translation initiation factor 2APANTHERPTHR13227NUCLEASE-RELATEDcoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108135contigH-elongata_contig108135:187..2037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108135.663.1mRNA_H-elongata_contig108135.663.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108135 163..2037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108135.663.1 ID=prot_H-elongata_contig108135.663.1|Name=mRNA_H-elongata_contig108135.663.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MDFWDVNRKKIMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVF
RYDGSGPVAKREINVLYDAVWRPALPNVYPDRPASPGRKGSAIADAAAGV
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013979TIF_beta_prop-like
IPR011387TIF2A