mRNA_H-elongata_contig107328.605.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: D7FZI9_ECTSI (BUB1 N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI9_ECTSI) HSP 1 Score: 126 bits (316), Expect = 6.260e-32 Identity = 58/81 (71.60%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGID-RRAQPMDIILKRQREFLRRMRRQWINSQ 240
A+HL+NA+DLFKFLYKKGIG AHFW+GWAL+AEN G YP+ EKLYVKGI+ RRA+P+D++ KRQ F+RRMRR WINSQ
Sbjct: 154 ATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMAEKLYVKGIEHRRAEPLDVLKKRQAHFMRRMRRHWINSQ 234
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: W7U3F2_9STRA (Protein serine threonine kinase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3F2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.250e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINSQEE 246
A L++ ++FKFL+KK IG+T A FW WA AE G + L +KLY KGI+ A P++++ +R+ F RRM R W+ EE
Sbjct: 123 ADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEE 204
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A7S2ENJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENJ0_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.730e-15 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 25 DLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINS 237
D+FKFL K+ IGS A FWI WA AE G Y EK++VKG+ +RA+P+ + RQ++F RRM R W+N+
Sbjct: 154 DIFKFLNKQKIGSVTALFWIAWAWVAEKGGDYAFAEKIFVKGLSKRAKPVKQLEARQKQFRRRMSRHWLNN 224
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A024GD52_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD52_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 3.880e-13 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWIN 234
A ++N +D+FK+LY+ GIG ++ +++GWA E++GKY K+Y+K I ++A+P D I ++ F RRM +WI+
Sbjct: 575 ADMVSNPNDIFKYLYRNGIGDQVSLYYVGWAWVLESLGKYSYAHKVYMKAIKKKAEPQDFIQQKYAAFQRRMNSRWIS 652
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A835ZDF8_9STRA (BUB1 N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.520e-12 Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINS 237
AS+L+NAD+LF++LYK IG+ A FW+ WA AE Y + +KL KG R D++ +R EF RR+R W S
Sbjct: 122 ASYLSNADELFRYLYKNEIGTGCALFWVSWAWVAEASKDYVMADKLLAKGAGRARDDRDLVKRRHAEFSRRVRSLWARS 200
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A7S2WMM4_9STRA (Hypothetical protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WMM4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.160e-12 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINSQEE 246
A L N +FK+L + IG LA ++I A AE +PL +K Y G++++A+P+D++ KR REF RRM R+W+N + E
Sbjct: 113 ADLLDNPSSVFKYLRENKIGDKLALYYIATAWTAERRNDFPLADKAYTVGLEKKAEPIDLLQKRHREFQRRMSRRWLNQEAE 194
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: B8BTH1_THAPS (BUB1 N-terminal domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTH1_THAPS) HSP 1 Score: 69.3 bits (168), Expect = 6.330e-12 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINS 237
A +N ++FK + K +G+ +A FW+ WA AE YP EK++ KG+ A+P + RQ++FLRRM R W+NS
Sbjct: 142 ADKTSNPSEVFKLMSKIKVGTNVALFWVAWAWVAEKSTDYPFTEKIFQKGLSVGAEPKKFLEDRQKQFLRRMSRHWLNS 220
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A024FZN1_9STRA (BUB1 N-terminal domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024FZN1_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.590e-11 Identity = 30/81 (37.04%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 1 ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINSQE 243
A+ ++N D+FK+LY+ IG +A F++GWAL E +G + K+Y+K + ++AQP ++ ++ ++F RRM R W+ E
Sbjct: 40 ANLVSNPKDIFKYLYQNKIGQHVALFYVGWALVLERLGNHAQAHKIYLKAVQKKAQPSQMLDQKFQDFQRRMSRHWLRMNE 120
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A1Z5K3F0_FISSO (Checkpoint serine/threonine-protein kinase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3F0_FISSO) HSP 1 Score: 66.2 bits (160), Expect = 7.770e-11 Identity = 27/71 (38.03%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 25 DLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINS 237
++F++LY++ IG+ +A FW WA AE Y +K++ KG+ ++A P++ + +R ++F RRM R W+NS
Sbjct: 118 EIFQYLYQQNIGAQVAIFWAAWAFVAEKEQDYAFADKIFNKGLSKKAAPLNYLQQRHKQFQRRMSRYWLNS 188
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Match: A0A1Z5JCG6_FISSO (Checkpoint serine/threonine-protein kinase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCG6_FISSO) HSP 1 Score: 66.2 bits (160), Expect = 7.770e-11 Identity = 27/71 (38.03%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 25 DLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGIDRRAQPMDIILKRQREFLRRMRRQWINS 237
++F++LY++ IG+ +A FW WA AE Y +K++ KG+ ++A P++ + +R ++F RRM R W+NS
Sbjct: 118 EIFQYLYQQNIGAQVAIFWAAWAFVAEKEQDYAFADKIFNKGLSKKAAPLNYLQQRHKQFQRRMSRYWLNS 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107328.605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig107328.605.1 >prot_H-elongata_contig107328.605.1 ID=prot_H-elongata_contig107328.605.1|Name=mRNA_H-elongata_contig107328.605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp ASHLTNADDLFKFLYKKGIGSTLAHFWIGWALHAENVGKYPLVEKLYVKGback to top mRNA from alignment at H-elongata_contig107328:126..1344+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig107328.605.1 ID=mRNA_H-elongata_contig107328.605.1|Name=mRNA_H-elongata_contig107328.605.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1219bp|location=Sequence derived from alignment at H-elongata_contig107328:126..1344+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig107328:126..1344+ >mRNA_H-elongata_contig107328.605.1 ID=mRNA_H-elongata_contig107328.605.1|Name=mRNA_H-elongata_contig107328.605.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=492bp|location=Sequence derived from alignment at H-elongata_contig107328:126..1344+ (Himanthalia elongata Himel1 dioecious)back to top |