mRNA_H-elongata_contig20559.5865.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: D8LQC9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC9_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.520e-63 Identity = 120/213 (56.34%), Postives = 143/213 (67.14%), Query Frame = 3
Query: 195 GETVRLTPPWTFSGLIFLSI*FPRLGVCRGDRYFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEVRGAARFASRDAPEEPAGSARKKRSV 833
G T+R+ G +F + LG Y+EERFGV S + GY+ SYT G++F +Q+YVVGRL S SET LV SLA+ ALMNLAEG PS+ G WGYLA++IPAR VA+ L ACLQS+FTQRVPQ D+GAALG LNVL SASGVV P YG +L+ G+LARPT+ AAHY FF LWW MEV A AP E G +RK SV
Sbjct: 290 GPTLRILAAKLIFGFLFRA-----LGSQNFVGYYEERFGVASASLGYMSSYTAGLSFFVQLYVVGRLASLASETHLVAMSLAVVALMNLAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEV------ARGRAPAEGEGGSRKPESV 491
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A6H5K2J0_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J0_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.060e-63 Identity = 119/213 (55.87%), Postives = 142/213 (66.67%), Query Frame = 3
Query: 195 GETVRLTPPWTFSGLIFLSI*FPRLGVCRGDRYFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEVRGAARFASRDAPEEPAGSARKKRSV 833
G T+R+ + + F LG Y+EERFGV S +RGY+ SYT G++FL+Q+YVVGRL S SET LV SLA+ A MN AEG PS+ G WGYLA++IPAR VA+ L ACLQS+FTQRVPQ D+GAALG LNVL SASGVV P YG +L+ G+LARPT+ AAHY FF LWW MEV A AP E G +RK SV
Sbjct: 291 GPTLRI-----LAAKLIFDFFFRALGSQNFVGYYEERFGVASASRGYMSSYTAGLSFLVQLYVVGRLASLGSETHLVAMSLAVVAFMNFAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEV------ARGGAPAEGEGGSRKPESV 492
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A835YHH1_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH1_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.680e-26 Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 3
Query: 312 VDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEV 758
V+S A GY+ SY+ V Q+Y+VGRL TSE+ L ++A A E P GL YLA+ +P R A L+ CLQ++FT+R+P++D+GAALGA+ VL+SASGV+ PLYG L+ G R AHY+ F +LW A E
Sbjct: 258 VESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAP--IGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEA 404
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7S3Y4E4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4E4_HETAK) HSP 1 Score: 108 bits (270), Expect = 9.380e-23 Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 3
Query: 291 YFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYG---VRLVTTWGVLARPTLTAAHYVGFFSLWWAM 752
Y+EERFG+D GY+ SY V L+Q+++V + R E L +L +L E +PS+ G W YL + +P +G+ A L CL+S+FT+ VP ++GAALG LNVL++A GVV P+YG V RP + HY + + A+
Sbjct: 290 YYEERFGLDLAHIGYIKSYQNAVVLLVQLFLVAPIARRADEAELTTLALGGLVAAHLFEASPSV-GKWEYLTLCVPLKGLGTALLRVCLESLFTEAVPPGNLGAALGLLNVLQAAVGVVAPVYGGWVFAQADRMAVHRRPAVVGLHYAALTAFYAAV 445
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7S2GW09_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GW09_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.440e-9 Identity = 43/154 (27.92%), Postives = 73/154 (47.40%), Query Frame = 3
Query: 264 RLGVCRGDRYFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYV 725
R + D + +RFG+ G G + + ++ Q + GR E SL + L L + T + ++ Y + +P + VA L+S+ VP+SDIGAALGA++VL S +GV+ P+ ++ G++A P Y+
Sbjct: 128 RASMSMQDTWEMDRFGLRVGQLGNLRTVKSLLSITFQAFAAGRAIRYLGERKAFVLSLFLGLLGTLLDAT--LLNVFHYAVVCVPIKLVAGQLAFLALESLMLGLVPRSDIGAALGAVDVLSSVTGVLAPILSGVIIEYGGLVAMPLAAGTGYL 279
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A672ZXH8_9TELE (Uncharacterized protein n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZXH8_9TELE) HSP 1 Score: 58.5 bits (140), Expect = 1.620e-6 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 3
Query: 219 PWTFSGLIFLSI*FPRLGVCRGDRYFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGV 689
PW F G+ + F + + E F + GY+ +Y V ++Q V+GRLT+R SE L+ S+A++AL+ LA+ M ++ + ++P + + SI T+ VP SD G LG ++S VGP G L +GV
Sbjct: 31 PWCFPGIF--QVMFSIIAL--------EFFKLQPEQNGYLMAYFGIVQMVIQGGVIGRLTARFSENSLLNLSIAVAALVGLAQAY--MQNVFQFCVTVVPMM-FSLSVFNVITDSILTKSVPSSDTGTMLGLCASVQSLLRTVGPTVGGFLYVNFGV 174
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7C3PJC5_9CHLR (MFS transporter n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3PJC5_9CHLR) HSP 1 Score: 58.5 bits (140), Expect = 5.830e-6 Identity = 52/177 (29.38%), Postives = 86/177 (48.59%), Query Frame = 3
Query: 177 TVDPLLGETVRLTPPWTFSGLIFLSI*FPRLGVCRGDRYFE----ERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEG-TPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRL---VTTW 683
T+D L+ V L P F+G I ++ F L F RF + + G+V +Y ++ +Q ++VGRLT+R E +L+ S+A+ A+ L TPS+F +L +++ +A L L S T+ V ++G LG ++SA+ + P+ G L V TW
Sbjct: 198 TLDALM---VALKRP--FTGPILITRFFFGLAFAIFQTIFSLYALSRFNLSARDTGFVLTYVGILSVFVQGFLVGRLTTRFREDVLITFSVALMAVSLLGWALTPSVF----WLLVVLTPTAIAGGTLNTLLSSTLTKAVTPQEVGGILGLSASVESATRIFAPILGGALLQQVGTW 365
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A2E0URB6_9CHLR (MFS transporter n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0URB6_9CHLR) HSP 1 Score: 58.2 bits (139), Expect = 7.710e-6 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 3
Query: 186 PLLGETVRLTPPWTFSGLIFLSI*FPRLGVCRGDRYFEERFGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEG-TPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLA 695
P++G + + F+ +F SI F G + RF +++ GY+ +Y ++ + Q VVGRLT R + +L+ ++ + AL L PS+ L LA I A GV N + S T+ VP+S+ G LG L+SA+ VV P G L+ G A
Sbjct: 210 PVVGRLLHTRLFYGFAFSLFQSI-FALYG--------QYRFNLNAQNTGYILAYVGLLSVITQGVVVGRLTDRLPDRVLILSATVLMALSLLGWAFAPSIVVLLIILAPIALAGGVLNTVI----NSALTKAVPRSEFGGILGLSASLESATRVVAPTIGGVLLGQLGTSA 367
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7J6CYI1_9TELE (MFS domain-containing protein n=49 Tax=Cyprinoidei TaxID=30727 RepID=A0A7J6CYI1_9TELE) HSP 1 Score: 56.6 bits (135), Expect = 2.430e-5 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 3
Query: 306 FGVDSGARGYVHSYTFGVNFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGV 689
F + + GY+ +Y V ++Q V+GRLTSR SE+ L+ S+ IS+L+ LA+ M ++ + I+IP + + ++ T+ V SD G LG ++S VGP G L T+GV
Sbjct: 246 FQLKAEQNGYLMAYFGVVQMVIQGAVIGRLTSRFSESSLLLLSVGISSLVGLAQAV--MTNVFHFCLIVIPMM-FSLSVFNVITDTMLTKSVSPSDTGTMLGLCASVQSLLRTVGPTIGGFLYETYGV 370
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A4W6EFK1_LATCA (Solute carrier family 22 member 18 n=4 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6EFK1_LATCA) HSP 1 Score: 55.8 bits (133), Expect = 4.470e-5 Identity = 40/132 (30.30%), Postives = 70/132 (53.03%), Query Frame = 3
Query: 300 ERFGVDSGARGYVHSYTFGV-NFLMQMYVVGRLTSRTSETLLVWASLAISALMNLAEG-TPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGV 689
E F ++ GY+ +Y FG+ ++Q V+GRLT+R SE+ L+ S+ +S+L+ LA+ ++F + + +P + + S+ T+ VP SD G LG ++S VGP +G L +G+
Sbjct: 259 EFFKLEPEQNGYLMAY-FGIAQMVIQGGVIGRLTTRYSESSLLLLSIGVSSLVGLAQAYMQNVF----HFCLTVPPMMFSLSVFNVITDSMLTKSVPSSDTGTMLGLCASVQSLLRTVGPTFGGFLYVNYGI 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20559.5865.1 >prot_H-elongata_contig20559.5865.1 ID=prot_H-elongata_contig20559.5865.1|Name=mRNA_H-elongata_contig20559.5865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp MQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPback to top mRNA from alignment at H-elongata_contig20559:5402..6842- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20559.5865.1 ID=mRNA_H-elongata_contig20559.5865.1|Name=mRNA_H-elongata_contig20559.5865.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1441bp|location=Sequence derived from alignment at H-elongata_contig20559:5402..6842- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20559:5402..6842- >mRNA_H-elongata_contig20559.5865.1 ID=mRNA_H-elongata_contig20559.5865.1|Name=mRNA_H-elongata_contig20559.5865.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at H-elongata_contig20559:5402..6842- (Himanthalia elongata Himel1 dioecious)back to top |