prot_H-elongata_contig20559.5865.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20559.5865.1
Unique Nameprot_H-elongata_contig20559.5865.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: D8LQC9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC9_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.050e-51
Identity = 98/154 (63.64%), Postives = 111/154 (72.08%), Query Frame = 0
Query:    2 QMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEVRGAARFASRDAPEEPAGSARKKRSV 155
            Q+YVVGRL S  SET LV  SLA+ ALMNLAEG PS+ G WGYLA++IPAR VA+  L ACLQS+FTQRVPQ D+GAALG LNVL SASGVV P YG +L+   G+LARPT+ AAHY  FF LWW MEV      A   AP E  G +RK  SV
Sbjct:  344 QLYVVGRLASLASETHLVAMSLAVVALMNLAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEV------ARGRAPAEGEGGSRKPESV 491          
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A6H5K2J0_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J0_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.240e-50
Identity = 96/154 (62.34%), Postives = 109/154 (70.78%), Query Frame = 0
Query:    2 QMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEVRGAARFASRDAPEEPAGSARKKRSV 155
            Q+YVVGRL S  SET LV  SLA+ A MN AEG PS+ G WGYLA++IPAR VA+  L ACLQS+FTQRVPQ D+GAALG LNVL SASGVV P YG +L+   G+LARPT+ AAHY  FF LWW MEV      A   AP E  G +RK  SV
Sbjct:  345 QLYVVGRLASLGSETHLVAMSLAVVAFMNFAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEV------ARGGAPAEGEGGSRKPESV 492          
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A835YHH1_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.330e-24
Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = 0
Query:    2 QMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYVGFFSLWWAMEV 130
            Q+Y+VGRL   TSE+ L   ++A  A     E  P   GL  YLA+ +P R  A   L+ CLQ++FT+R+P++D+GAALGA+ VL+SASGV+ PLYG  L+   G   R     AHY+ F +LW A E 
Sbjct:  278 QVYLVGRLARSTSESTLAACAMAAIAAAAALEAAP--IGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEA 404          
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7S3Y4E4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4E4_HETAK)

HSP 1 Score: 82.8 bits (203), Expect = 1.810e-15
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    2 QMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYG---VRLVTTWGVLARPTLTAAHYVGFFSLWWAM 128
            Q+++V  +  R  E  L   +L      +L E +PS+ G W YL + +P +G+  A L  CL+S+FT+ VP  ++GAALG LNVL++A GVV P+YG           V  RP +   HY    + + A+
Sbjct:  317 QLFLVAPIARRADEAELTTLALGGLVAAHLFEASPSV-GKWEYLTLCVPLKGLGTALLRVCLESLFTEAVPPGNLGAALGLLNVLQAAVGVVAPVYGGWVFAQADRMAVHRRPAVVGLHYAALTAFYAAV 445          
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Match: A0A7S2GW09_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GW09_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.370e-6
Identity = 36/118 (30.51%), Postives = 58/118 (49.15%), Query Frame = 0
Query:    2 QMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIPARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVRLVTTWGVLARPTLTAAHYV 119
            Q +  GR      E      SL +  L  L + T  +  ++ Y  + +P + VA       L+S+    VP+SDIGAALGA++VL S +GV+ P+    ++   G++A P      Y+
Sbjct:  164 QAFAAGRAIRYLGERKAFVLSLFLGLLGTLLDAT--LLNVFHYAVVCVPIKLVAGQLAFLALESLMLGLVPRSDIGAALGAVDVLSSVTGVLAPILSGVIIEYGGLVAMPLAAGTGYL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20559.5865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQC9_ECTSI1.050e-5163.64MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K2J0_9PHAE2.240e-5062.34MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YHH1_9STRA1.330e-2445.74Major facilitator superfamily domain-containing pr... [more]
A0A7S3Y4E4_HETAK1.810e-1536.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2GW09_9STRA1.370e-630.51Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..131
e-value: 3.8E-8
score: 34.4
NoneNo IPR availablePANTHERPTHR24002SOLUTE CARRIER FAMILY 22 MEMBER 18coord: 2..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..161
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 3..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20559contigH-elongata_contig20559:5519..6474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20559.5865.1mRNA_H-elongata_contig20559.5865.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20559 5402..6842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20559.5865.1 ID=prot_H-elongata_contig20559.5865.1|Name=mRNA_H-elongata_contig20559.5865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
MQMYVVGRLTSRTSETLLVWASLAISALMNLAEGTPSMFGLWGYLAIIIP
ARGVANACLAACLQSIFTQRVPQSDIGAALGALNVLKSASGVVGPLYGVR
LVTTWGVLARPTLTAAHYVGFFSLWWAMEVRGAARFASRDAPEEPAGSAR
KKRSVNREKEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf