mRNA_H-elongata_contig20428.5812.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.650e-108 Identity = 178/297 (59.93%), Postives = 206/297 (69.36%), Query Frame = 1
Query: 1 TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLK--------------------------------LTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMFEKQAGR 795
T +GV+IL+CSVVHSA H A A + + N +NRSGV A++LLLP +LPM + K K LTFE+RK LH F+PF+IAVCFHG +L+ GAILL WYL DR YFTT MTF + P +K VGRGTLVRF LP GY +KPGAYVQVNCPAIS EWHPFSLFP+ G +P AGFHVEAVGDWT E+FR LE P MPLWITAAQPSV+E+TVY++NV+LVCTG GITPAV V ERF KKKN+HLLW R+AGMVAMFEKQ R
Sbjct: 311 TYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLLPIALPMTMRLAKAKVPEEVYRSLAPTGFSLPRVVARCFARDNETPQLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGPRPR--AGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFENVLLVCTGAGITPAVSVAERFQKKKNIHLLWCCRDAGMVAMFEKQLRR 605
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI) HSP 1 Score: 322 bits (826), Expect = 1.480e-100 Identity = 164/265 (61.89%), Postives = 194/265 (73.21%), Query Frame = 1
Query: 1 TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMFEKQAGR 795
T +GV+IL+CSVVHS H A A + + + +NRSG+ A++LLLP +LPM + K KLTFE RK LH FIPF+IAVCFHG +L+ GAILL WYL DR YFTT MTF + P +K VGRGTLVRF LP GY +KPGAYVQVNCPAIS EWHPFSLFP+ GS+P AGFHVEAVGDWT E+FR LE P MPLWITAAQPSV+E+T+Y+DN I+ A+ + F KKKN+HLLW R+AGMVAMFEKQ R
Sbjct: 331 TYFGVLILLCSVVHSVCHIAVGALQRRADHAFKDEINRSGLVAVLLLLPIALPMTMRLAKTKLTFEARKYLHLLFIPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGSRPR--AGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVVEKTMYFDN------EPSISEAIELEPVFQKKKNIHLLWCCRDAGMVAMFEKQLRR 587
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI) HSP 1 Score: 290 bits (743), Expect = 6.780e-90 Identity = 137/262 (52.29%), Postives = 181/262 (69.08%), Query Frame = 1
Query: 1 TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMFEKQ 786
T +G + L+ H +H AR++Y ++ RSG+ AI+LLLP LPM F + K+TF+ RK +H F+ ++A+CFH R +ILLLWYL D FYF T TF + P ++ +GRGT+V LPEGY FK G+Y+ VNCPAI EWHPFSL P+ G T A F+ EAVGDWT++LFRL L P PLWITAAQPS++E T++YDNV+L+CTG GITPAV V +RFA KKN+HL+W++R+ GM+A+FEKQ
Sbjct: 214 TYFGFLTLVAGWAHGVLHLARVSYADEKFLMYETHAFRSGIFAILLLLPIVLPMRFSFFRNKMTFQFRKRMHMLFLVMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGV--TSRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNVLLICTGAGITPAVAVADRFAAKKNIHLMWIARDHGMMALFEKQ 473
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 283 bits (725), Expect = 4.320e-88 Identity = 144/265 (54.34%), Postives = 181/265 (68.30%), Query Frame = 1
Query: 1 TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMFEKQAGR 795
T +G + L+ V+H H AR EG+ + + M RSG A++LL P ++PM++G K +TFE RK LH FIPF++A+CFHG L IL+ WYL DR YFTT + GY FK G+Y+QVNCPAISA EWHPFS+FP+ G +P GF+VEAVGDWTQELFRLSL+ P MPLWITAAQPSVLE++VY++NVI+VCTG GITPA+C+ + +KKKN+HL+WLSREAGMVA FEKQ R
Sbjct: 111 TYFGSLTLLFGVLHGLAHLAREVNEGHWNCFASS-MGRSGFIALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRI------------------------GYQFKVGSYIQVNCPAISAKEWHPFSMFPVPGPRPR--GGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFENVIMVCTGAGITPAICLADMLSKKKNVHLMWLSREAGMVATFEKQLRR 348
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE) HSP 1 Score: 248 bits (634), Expect = 1.430e-75 Identity = 126/218 (57.80%), Postives = 155/218 (71.10%), Query Frame = 1
Query: 1 TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDN 654
T +G + L+ V+H H AR EGN + + M RSG A++LL P ++PM++G K +TFE RK LH FIPF++A+CFHG L IL+ WYL DR YFTT M F I + F+ VGR TLVRF LP GY F G+Y+QVNCPAISA EWHPFS+FP+ G +P GF+VEAVGDWTQELFRLSLE P MPLWITAAQPSVLE++VY++N
Sbjct: 320 TFFGSLTLLFGVLHGLAHLAREVNEGNWNFFA-SPMGRSGFVALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRMHFCIERAVFRPVGRATLVRFDLPPGYQFNVGSYIQVNCPAISAKEWHPFSMFPVPGPRPR--GGFYVEAVGDWTQELFRLSLEDPCMPLWITAAQPSVLEKSVYFEN 534
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: D7G8D0_ECTSI (Putative respiratory burst oxidase homolog protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D0_ECTSI) HSP 1 Score: 138 bits (348), Expect = 3.070e-38 Identity = 64/84 (76.19%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 403 EGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDN 654
GY ++PGAYVQVNCPAIS EWHPFSLFP+ G P AG HVEAVGDWT ELFRLSLE P MPLWITAAQPSV EQ VY+DN
Sbjct: 4 SGYKYQPGAYVQVNCPAISVSEWHPFSLFPVPGPNPR--AGLHVEAVGDWTNELFRLSLEHPRMPLWITAAQPSVAEQAVYFDN 85
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL) HSP 1 Score: 136 bits (342), Expect = 1.210e-32 Identity = 95/268 (35.45%), Postives = 137/268 (51.12%), Query Frame = 1
Query: 1 TDYGVVILICSVV-HSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAI--LLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLT--AGFHVEAVGDWTQELFRLSLEKPYM-PLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMFEKQ 786
T G IL SV HS H R +GNL L V +G+ A++ LPM+V LK +L++E+RK LH F IA+ FH ++ F + +LL Y D Y + + I F + G +RF+ PEG F+ G YV + P ++ +WH FSLF S PT + H+ VGDWT L E+P P W+ S + +DN+ILV +G GITPA+ VI AK + ++L+W R+ G+V + +Q
Sbjct: 149 TTLGHFILWSSVFFHSLPHIIRWGLQGNLSFLVTRVTGATGLLAMVAAPCIVLPMLVPALKRRLSWEVRKGLHHLHWVFGIALAFHAPAVNIFWIMFAVLLVYGLDALYGLLLKAYIIETAEFTCLKNGVQLRFVNPEG--FRGGGYVLLCVPWLNRHQWHAFSLF----SHPTEPNQSCVHISNVGDWTDLLHGSLTERPTCRPCWVQGPFASPYHTALEFDNIILVASGIGITPAIEVINHHAKTRKVNLVWSCRDPGLVQFYLEQ 410
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU) HSP 1 Score: 132 bits (331), Expect = 2.910e-31 Identity = 83/258 (32.17%), Postives = 134/258 (51.94%), Query Frame = 1
Query: 10 GVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGS--SLRSFGAILLLWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMF 777
G ++ + +HS H R A +GN ++L + SG+ +L+ ++P+ V ++K ++ +E RK LH+ I + I +CFH + + + YLAD + T+ + F + G + F P G++F+ YV V P IS +WH FSLF S +KP A + AVGDWT+ L E P WI+ S YDN+ILV +G GITPA+ +I + +K+ ++L+W R+A +V +
Sbjct: 129 GHIVALDYSLHSVCHIVRWALQGNAKLLLTHQTGVSGLLCFVLIPVITVPLSVAYIKKRMAWEWRKGLHYLSIVWGITICFHAPLMDIAWLMGVPVGMYLADMLIGSVWRTYRVDTSIFYRLENGVELTFEHPPGFHFQGAGYVLVCLPWISQYQWHAFSLFAHS-TKPN-HACVCMSAVGDWTKSLHAHVQEPTRRPAWISGPFASPYSTAGEYDNLILVASGIGITPALSLITTYKEKRRVNLIWSCRDASLVEFY 384
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: A0A7S2V2F3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F3_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.770e-29 Identity = 83/264 (31.44%), Postives = 129/264 (48.86%), Query Frame = 1
Query: 22 LIC--SVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLRSFGAILLLW----YLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYYFKP----GAYVQVNCPAISAVEWHPFSLF--PLSGSKPTLTAGFHVEAVGDWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMF 777
LIC ++VH+ HF R +G L + +G+ A ++LL S+PM + L+ K+ +E+RK LH+ FIPF I + +H S S+ A +L + Y D FY T T F+ +F ++ G V + + G + + P IS EWHPFS++ P +K + + G+W++ L P+W+ S V YDN ILV TG GITPA+C I K + L+W++ E +V +
Sbjct: 122 LICFEALVHTIFHFIRWGLQGKLMFIFSTRTGSTGLLAFIILLLISVPMTL--LRAKICYEVRKALHWMFIPFAICLAWHAPSDVSWIAHVLSFCIVIYCLDSFYVWTFRTEFVKTTHFTVLDCGVQVSMPVSSAMVDRTVLGGGGFAYLCIPWISKYEWHPFSIYDDPEDPNKRNI----FIYKAGNWSKALHNSLRVNTTCPVWLQGPFHSPFGSAVEYDNQILVATGIGITPAICTINALKADKKISLIWMTHEPELVEFY 379
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Match: B8CG47_THAPS (FAD-binding FR-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG47_THAPS) HSP 1 Score: 120 bits (302), Expect = 2.230e-27 Identity = 74/258 (28.68%), Postives = 123/258 (47.67%), Query Frame = 1
Query: 37 VHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTSLPMIVGFLKLKLTFELRKILHFAFIPFIIAVCFHGSSLR----SFGAILL----LWYLADRFYFTTIMTFFIGKPNFKIVGRGTLVRFILPEGYY--FKPGAYVQVNCPAISAVEWHPFSLFPLSGSKPTLTAGFHVEAVG-DWTQELFRLSLEKPYMPLWITAAQPSVLEQTVYYDNVILVCTGTGITPAVCVIERFAKKKNLHLLWLSREAGMVAMF 777
VH+ H R +GN+++L N+ SG+ ++ + PM + L+L +++E+RK LH+ F F I +CFH + F ++L ++Y D Y MT I F ++ G + + + + + G Y V P +S +WH FSLF + P L F ++ G DWT + P+WI+ S + +DN I V +G GITPA+ VI + + ++L+W R+ M+ F
Sbjct: 164 VHTLFHCLRWGIQGNIDLLWTNITGLSGLIVVLATPLITFPMFINPLRLAMSYEVRKGLHYLFYLFAIGMCFHNKTSAFPNGGFNQVVLGFCIVYYTLDSLYVMIFMTEMIETTVFNVLPSGVQMTMAVSDHFQKTYAQGGYGYVCLPWVSKYQWHAFSLFE-HPTDPNLRQVFMMKVQGGDWTNSVHEQLQRNTVRPVWISGPFVSPYNNALDFDNTICVASGIGITPALSVIRAHRESRRINLIWTCRDVAMLEFF 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20428.5812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20428.5812.1 >prot_H-elongata_contig20428.5812.1 ID=prot_H-elongata_contig20428.5812.1|Name=mRNA_H-elongata_contig20428.5812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp TDYGVVILICSVVHSAVHFARLAYEGNLEVLSGNVMNRSGVAAIMLLLPTback to top mRNA from alignment at H-elongata_contig20428:177..4543+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20428.5812.1 ID=mRNA_H-elongata_contig20428.5812.1|Name=mRNA_H-elongata_contig20428.5812.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4367bp|location=Sequence derived from alignment at H-elongata_contig20428:177..4543+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20428:177..4543+ >mRNA_H-elongata_contig20428.5812.1 ID=mRNA_H-elongata_contig20428.5812.1|Name=mRNA_H-elongata_contig20428.5812.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1596bp|location=Sequence derived from alignment at H-elongata_contig20428:177..4543+ (Himanthalia elongata Himel1 dioecious)back to top |