mRNA_H-elongata_contig20241.5731.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A1Y1IK20_KLENI (DUF659 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK20_KLENI) HSP 1 Score: 66.2 bits (160), Expect = 8.140e-11 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 10 ITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVERFSSV 243
IT C AH +DL ++D+ + W + VKFI +H KT+A++ +HS +L P DTRF TSFIT+ER V
Sbjct: 287 ITCSGCVAHGMDLALEDVGKEEWVSPTLKAARDLVKFITNHHKTIALFRQHSDLE-LLKPGDTRFATSFITLERLLEV 363
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A388LE59_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LE59_CHABU) HSP 1 Score: 61.2 bits (147), Expect = 4.820e-9 Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 10 ITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHS-GGRGVL-LPNDTRFGTSFITVER 231
I I CAAH+++LL+KDI IAW K+ + + VKFIK+HQ T+ + +R S G R VL +P + RF + ++ + R
Sbjct: 384 IPWIPCAAHTLNLLLKDISNIAWIKTVWKKGRNLVKFIKNHQSTMGLMSRCSMGDRKVLVMPTEVRFASVYLMLIR 459
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: UPI001CC3E32D (uncharacterized protein LOC122659629 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3E32D) HSP 1 Score: 57.0 bits (136), Expect = 1.420e-7 Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 19 IRCAAHSIDLLIKDI-VQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVERFSSV 243
+RCAAH + LL+KDI QI+WAK F K + F+ H LA+ +GG+ + P TRF ++F ++ V
Sbjct: 184 VRCAAHGVQLLLKDIDAQISWAKEVFDKAKLVIGFMYKHGTVLALMRECTGGKELKKPCKTRFASNFFMLKSILDV 259
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A388K744_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K744_CHABU) HSP 1 Score: 57.0 bits (136), Expect = 1.490e-7 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 MQGITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVER 231
M+ + I CAAH ++LL++DIV +A+ K VKF+++ Q TLA++ + P TRFGTS++ +ER
Sbjct: 54 MRVLPWIPCAAHCLNLLLRDIVAQPFARQTMRDAHKIVKFMRNKQNTLALHKIMKKALVLKRPVKTRFGTSYVMLER 130
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A388M9H4_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M9H4_CHABU) HSP 1 Score: 57.0 bits (136), Expect = 1.510e-7 Identity = 25/76 (32.89%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 10 ITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHS--GGRGVLLPNDTRFGTSFITVER 231
I + CAAH++ LL+KD+ +++W K VKFIKHH +T+++++ S + +++P + RF ++F + R
Sbjct: 383 IPWVSCAAHTLSLLLKDMAKLSWISKIVKRAKMMVKFIKHHHRTVSLFSACSLEEKKTLVMPTEVRFASTFEMLNR 458
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: UPI000511298E (uncharacterized protein LOC103958368 isoform X1 n=3 Tax=Maleae TaxID=721813 RepID=UPI000511298E) HSP 1 Score: 56.2 bits (134), Expect = 2.790e-7 Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 1
Query: 22 RCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVE 228
+CAAH IDL +KDI ++ W K K++ HQ LA+ + + +L P TRF TSF+T++
Sbjct: 321 QCAAHCIDLTLKDIAKMKWFDDTLKHAKCVTKYLYGHQWVLALMRKFTNNTEILRPAVTRFATSFLTLQ 389
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A388L930_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L930_CHABU) HSP 1 Score: 55.5 bits (132), Expect = 5.190e-7 Identity = 25/76 (32.89%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 10 ITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHS--GGRGVLLPNDTRFGTSFITVER 231
I + CAAH++ LL+KD+V++ W K VKFIK+H +T+++++ S + +++P + RF ++F + R
Sbjct: 200 IPWVPCAAHTLSLLLKDMVKLPWVSKIVKRAKMMVKFIKNHHRTVSLFSACSLEERKTLIMPTEVRFASTFEMLNR 275
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A443NSV2_9MAGN (Zf-BED domain-containing protein/DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NSV2_9MAGN) HSP 1 Score: 55.5 bits (132), Expect = 5.190e-7 Identity = 23/73 (31.51%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 25 CAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVERFSSV 243
CAA I+L+++DI ++ W + + KFI +H L + +H+GG+ ++ PN+TR +F T++ S+
Sbjct: 347 CAARRINLMLEDIEKLEWINTTTERAQSISKFIHNHSAVLNMMRKHTGGKELIQPNNTRSAANFTTLQNMVSL 419
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A388MC59_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MC59_CHABU) HSP 1 Score: 55.1 bits (131), Expect = 6.970e-7 Identity = 26/77 (33.77%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 10 ITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSG---GRGVLLPNDTRFGTSFITVER 231
I + CAAH +++L+KDI + W + K VKFIK+H +T+ +Y++ S R ++LP + F + F+ + R
Sbjct: 74 IPWVPCAAHCLNMLLKDICGVDWVQEVAQRAKMMVKFIKNHHRTVPLYSKCSDLVRERSLILPTEVWFASKFMMLAR 150
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Match: A0A6A6L740_HEVBR (BED-type domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6L740_HEVBR) HSP 1 Score: 54.7 bits (130), Expect = 9.690e-7 Identity = 21/69 (30.43%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 25 CAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVYTRHSGGRGVLLPNDTRFGTSFITVER 231
CAAH +DL++KD +I W + + +F+ ++ L + +++ G ++ P TRF T+F T++R
Sbjct: 324 CAAHCLDLILKDFAKIGWINTVIEQARSITRFVYNYSVVLNMVRKYTAGNDIVEPGLTRFATNFATLKR 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20241.5731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20241.5731.1 >prot_H-elongata_contig20241.5731.1 ID=prot_H-elongata_contig20241.5731.1|Name=mRNA_H-elongata_contig20241.5731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp MQGITGIRCAAHSIDLLIKDIVQIAWAKSKFAGIKKCVKFIKHHQKTLAVback to top mRNA from alignment at H-elongata_contig20241:6529..6780- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20241.5731.1 ID=mRNA_H-elongata_contig20241.5731.1|Name=mRNA_H-elongata_contig20241.5731.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=252bp|location=Sequence derived from alignment at H-elongata_contig20241:6529..6780- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20241:6529..6780- >mRNA_H-elongata_contig20241.5731.1 ID=mRNA_H-elongata_contig20241.5731.1|Name=mRNA_H-elongata_contig20241.5731.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig20241:6529..6780- (Himanthalia elongata Himel1 dioecious)back to top |