prot_H-elongata_contig20101.5665.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20101.5665.1
Unique Nameprot_H-elongata_contig20101.5665.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A6H5KJW5_9PHAE (Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW5_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 6.230e-52
Identity = 77/95 (81.05%), Postives = 85/95 (89.47%), Query Frame = 0
Query:    4 GDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            GD++NWLDEA+LVNP+IVA GKGK+  EEGCLSFPGM G VER NWVKVEA NAKGKK+KKKYTDWTARIFQHEYDHLDGTVYID L+P  R+KV
Sbjct:  164 GDAKNWLDEAILVNPKIVASGKGKITAEEGCLSFPGMEGKVERRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPSEREKV 258          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A1Z5KQL3_FISSO (Peptide deformylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQL3_FISSO)

HSP 1 Score: 149 bits (377), Expect = 1.520e-43
Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    1 SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            +Q GD + WLDE ++VNP IV   + + ++ EGCLSFPGM G VER+ W+KVEA N KGKK K+K+TDW ARIFQHEYDHLDGTVYIDRL  EGR KV
Sbjct:  105 NQSGDPKKWLDEVIMVNPTIVEFSEARNVETEGCLSFPGMDGPVERSKWIKVEAMNMKGKKFKRKFTDWEARIFQHEYDHLDGTVYIDRLDEEGRSKV 202          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: B8BSA6_THAPS (Peptide deformylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSA6_THAPS)

HSP 1 Score: 146 bits (368), Expect = 1.130e-42
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            ++ GDS+ W+ E ++VNP+IV       I++EGCLSFP M G+V+R+ W+KVEAQN KGKKIKKK+T W ARIFQHEYDHLDG VY+DRL+ EGRK+V
Sbjct:   66 NESGDSKRWMQEVIMVNPKIVEFSSATDIEQEGCLSFPEMGGDVQRSKWIKVEAQNLKGKKIKKKFTGWEARIFQHEYDHLDGVVYVDRLSEEGRKEV 163          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S3V6U4_9STRA (Peptide deformylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6U4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.180e-41
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0
Query:    1 SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            ++ GD + WL E V+VNP+IV   +GK ++ EGCLSFPGM G+V+R+ W+KVEAQN KGKK+KKK+  W ARIFQHEYDHLDGT+Y DRLT EG+  V
Sbjct:  127 NETGDKKKWLKETVMVNPKIVDFSEGKDVESEGCLSFPGMNGDVQRSKWIKVEAQNLKGKKMKKKFKGWEARIFQHEYDHLDGTLYPDRLTDEGKDLV 224          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S1YIG9_9STRA (Peptide deformylase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIG9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 8.470e-41
Identity = 65/98 (66.33%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    1 SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            ++ GD   WLDE VLVNPRIV  G G  ++ EGCLSFPGM G V+RN W++VEA N +GKKIKKK+ DW ARIFQHEYDHLDGTVYID L  E R +V
Sbjct:  158 NEHGDKTKWLDEMVLVNPRIVKKGGGTDVETEGCLSFPGMNGPVQRNKWIQVEALNKRGKKIKKKFFDWEARIFQHEYDHLDGTVYIDHLAEEARAEV 255          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S2PCD3_9STRA (Peptide deformylase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PCD3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.290e-40
Identity = 60/98 (61.22%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    1 SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            ++ GD + W+ E ++VNP IV   +   ++EEGCLSFP M G+V+R+ W+KVEAQN KGKKIKKK+  W ARIFQHEYDHLDG VYIDRLT +GRK++
Sbjct:  162 NEHGDPKKWMSEVIMVNPTIVEFSEASDVEEEGCLSFPDMGGDVDRSKWIKVEAQNLKGKKIKKKFRGWEARIFQHEYDHLDGKVYIDRLTEDGRKEI 259          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: K0T4T4_THAOC (Peptide deformylase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4T4_THAOC)

HSP 1 Score: 139 bits (349), Expect = 1.930e-39
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    4 GDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            GD + W+ E + VNP+IV     K I+ EGCLSFP M G+V+R+ W+K+EAQN KGKKIKKK+  W AR+FQHEYDHL+ TVYIDRLT EGRK+V
Sbjct:   97 GDPKKWMKENIFVNPKIVEYSDAKDIETEGCLSFPDMNGDVQRSKWIKIEAQNLKGKKIKKKFKGWEARVFQHEYDHLERTVYIDRLTDEGRKEV 191          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S1GJC1_CYCTE (Peptide deformylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC1_CYCTE)

HSP 1 Score: 139 bits (351), Expect = 2.560e-39
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    4 GDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            GDS+ WLDE VLVNPRIV +  G  ++ EGCLSFP M G+V+R+ W+KVEA   KG+K+KKK+  W ARIFQHEYDHLDG VYIDRL+ +GR  V
Sbjct:  133 GDSKKWLDEVVLVNPRIVQLSDGTDVEIEGCLSFPDMNGDVQRSKWIKVEALTPKGRKVKKKFNGWEARIFQHEYDHLDGVVYIDRLSEKGRSDV 227          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S1U4W5_9STRA (Peptide deformylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.540e-39
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    4 GDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            GD+R WL E VLVNPRIV   +    + EGCLSFP M G VERN W+KVEAQN KGKK+KKK+T W ARIFQHEYDHLDG VY DRL  + +K+V
Sbjct:   96 GDARKWLAEVVLVNPRIVERSEAVDEESEGCLSFPDMDGKVERNKWIKVEAQNLKGKKLKKKFTGWEARIFQHEYDHLDGVVYPDRLDAKEKKRV 190          
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Match: A0A7S1BIF6_9STRA (Peptide deformylase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIF6_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.530e-38
Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    4 GDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV 98
            GD   WLDE  +VNP+I    +GK ++ EGCLSFPGM G V+R+ W+KVEA N KGKKIKKK+  W ARIFQHEYDHLDG VY DRL  +G+ +V
Sbjct:  135 GDKTKWLDEVTMVNPKITTFSEGKDVETEGCLSFPGMDGKVQRSKWIKVEAVNLKGKKIKKKFVGWEARIFQHEYDHLDGKVYTDRLDDDGKSEV 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20101.5665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJW5_9PHAE6.230e-5281.05Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A1Z5KQL3_FISSO1.520e-4366.33Peptide deformylase n=2 Tax=Fistulifera solaris Ta... [more]
B8BSA6_THAPS1.130e-4263.27Peptide deformylase (Fragment) n=1 Tax=Thalassiosi... [more]
A0A7S3V6U4_9STRA5.180e-4163.27Peptide deformylase n=1 Tax=Chaetoceros debilis Ta... [more]
A0A7S1YIG9_9STRA8.470e-4166.33Peptide deformylase n=1 Tax=Grammatophora oceanica... [more]
A0A7S2PCD3_9STRA7.290e-4061.22Peptide deformylase n=2 Tax=Skeletonema marinoi Ta... [more]
K0T4T4_THAOC1.930e-3963.16Peptide deformylase n=1 Tax=Thalassiosira oceanica... [more]
A0A7S1GJC1_CYCTE2.560e-3964.21Peptide deformylase n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A7S1U4W5_9STRA7.540e-3966.32Peptide deformylase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A7S1BIF6_9STRA1.530e-3862.11Peptide deformylase n=2 Tax=Corethron hystrix TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 44..62
score: 32.16
coord: 32..43
score: 55.86
coord: 63..92
score: 40.99
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 12..94
e-value: 7.6E-30
score: 103.6
IPR023635Peptide deformylasePANTHERPTHR10458PEPTIDE DEFORMYLASEcoord: 10..96
IPR036821Peptide deformylase superfamilyGENE3D3.90.45.10coord: 2..98
e-value: 6.3E-35
score: 122.0
IPR036821Peptide deformylase superfamilySUPERFAMILY56420Peptide deformylasecoord: 9..96
NoneNo IPR availablePANTHERPTHR10458:SF2PEPTIDE DEFORMYLASEcoord: 10..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20101contigH-elongata_contig20101:1836..3665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20101.5665.1mRNA_H-elongata_contig20101.5665.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20101 1836..3665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20101.5665.1 ID=prot_H-elongata_contig20101.5665.1|Name=mRNA_H-elongata_contig20101.5665.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
SQGGDSRNWLDEAVLVNPRIVAMGKGKVIDEEGCLSFPGMRGNVERNNWV
KVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDRLTPEGRKKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023635Peptide_deformylase
IPR036821Peptide_deformylase_sf