prot_H-elongata_contig199988.5629.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199988.5629.1
Unique Nameprot_H-elongata_contig199988.5629.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: D7FNJ6_ECTSI (Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ6_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.920e-40
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKAL+REFYRFSVGGLRDVAEIKGHR
Sbjct:  515 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALDREFYRFSVGGLRDVAEIKGHR 587          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A7J6U5E5_PEROL (ATP-dependent Lon protease pim1 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6U5E5_PEROL)

HSP 1 Score: 129 bits (325), Expect = 4.790e-37
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGL D+KERILEFIAVGKLRG + G+ILC VGPPGVGKTS+G SIA+++NREFYRFSVGGL DVAEIKGHR
Sbjct:   15 DHYGLKDVKERILEFIAVGKLRGSLQGKILCLVGPPGVGKTSVGKSIARSINREFYRFSVGGLSDVAEIKGHR 87          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A7S3XLI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLI5_HETAK)

HSP 1 Score: 130 bits (326), Expect = 4.910e-36
Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            +H+GL+D+KER+LEFIAVG+LRG VHG+ILC  GPPGVGKTSIG SIA+ALNRE+YRFSVGGL DVAEIKGHR
Sbjct:   72 EHHGLEDVKERVLEFIAVGRLRGAVHGKILCLAGPPGVGKTSIGRSIARALNREYYRFSVGGLSDVAEIKGHR 144          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A835YRA9_9STRA (Lon protease homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.000e-35
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGLDDIK+RILEFIAVGKLRG VHG+ILCF GPPGVGKTSIG SIA+ALNREF+RFSVGGL D+AEIKGHR
Sbjct:  354 DHYGLDDIKQRILEFIAVGKLRGTVHGKILCFAGPPGVGKTSIGQSIARALNREFFRFSVGGLTDIAEIKGHR 426          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A7J6SS70_PEROL (ATP-dependent Lon protease pim1 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SS70_PEROL)

HSP 1 Score: 129 bits (325), Expect = 1.010e-35
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGL D+KERILEFIAVGKLRG + G+ILC VGPPGVGKTS+G SIA+++NREFYRFSVGGL DVAEIKGHR
Sbjct:   98 DHYGLKDVKERILEFIAVGKLRGSLQGKILCLVGPPGVGKTSVGKSIARSINREFYRFSVGGLSDVAEIKGHR 170          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A2G5BDB7_COERN (Lon protease homolog, mitochondrial n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BDB7_COERN)

HSP 1 Score: 135 bits (341), Expect = 1.890e-35
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGLDD+K+RILEFIAVGKLRG V G+ILCFVGPPGVGKTSIG SIA++LNREFYRFSVGGL DVAEIKGHR
Sbjct:  574 DHYGLDDVKQRILEFIAVGKLRGAVQGKILCFVGPPGVGKTSIGKSIARSLNREFYRFSVGGLTDVAEIKGHR 646          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A2P6MZ80_9EUKA (Lon protease like protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZ80_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 8.340e-35
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGL D+KERILEFIAVGKLR GV G+ILCFVGPPGVGKTSIG SIAKA NREFYRFS+GG+RDVAEI+GHR
Sbjct:  425 DHYGLKDVKERILEFIAVGKLRAGVQGKILCFVGPPGVGKTSIGKSIAKATNREFYRFSLGGMRDVAEIRGHR 497          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A8K1CMW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMW1_PYTOL)

HSP 1 Score: 134 bits (336), Expect = 8.890e-35
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGL DIKERILEF+AV KL+GGV G+ILCFVGPPGVGKTSIG SIA++LNREFYRFSVGGL DVAEIKGHR
Sbjct:  454 DHYGLSDIKERILEFVAVSKLKGGVQGKILCFVGPPGVGKTSIGQSIARSLNREFYRFSVGGLSDVAEIKGHR 526          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A2T9YHI6_9FUNG (Lon protease homolog, mitochondrial n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YHI6_9FUNG)

HSP 1 Score: 134 bits (336), Expect = 8.930e-35
Identity = 61/73 (83.56%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGLDD+K+RILEF+AVGKL+G + G+ILCFVGPPGVGKTSIG SIA++LNREFYRFSVGGL DVAEIKGHR
Sbjct:  609 DHYGLDDVKDRILEFVAVGKLKGAIQGKILCFVGPPGVGKTSIGKSIARSLNREFYRFSVGGLSDVAEIKGHR 681          
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Match: A0A7S1KVJ6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KVJ6_ALECA)

HSP 1 Score: 130 bits (328), Expect = 1.130e-34
Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    1 DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKALNREFYRFSVGGLRDVAEIKGHR 73
            DHYGL D+KERILE IAVG LRG V G+ILCFVGPPGVGKTSIG SIA+ALNREFYRFSVGGL DVAEIKGHR
Sbjct:  188 DHYGLSDVKERILELIAVGSLRGAVQGKILCFVGPPGVGKTSIGRSIAEALNREFYRFSVGGLFDVAEIKGHR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199988.5629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNJ6_ECTSI1.920e-4098.63Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7J6U5E5_PEROL4.790e-3782.19ATP-dependent Lon protease pim1 (Fragment) n=1 Tax... [more]
A0A7S3XLI5_HETAK4.910e-3680.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YRA9_9STRA1.000e-3587.67Lon protease homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A7J6SS70_PEROL1.010e-3582.19ATP-dependent Lon protease pim1 (Fragment) n=1 Tax... [more]
A0A2G5BDB7_COERN1.890e-3587.67Lon protease homolog, mitochondrial n=1 Tax=Coeman... [more]
A0A2P6MZ80_9EUKA8.340e-3586.30Lon protease like protein (Fragment) n=1 Tax=Plano... [more]
A0A8K1CMW1_PYTOL8.890e-3586.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2T9YHI6_9FUNG8.930e-3583.56Lon protease homolog, mitochondrial n=1 Tax=Smitti... [more]
A0A7S1KVJ6_ALECA1.130e-3486.30Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 30..64
e-value: 8.2E-8
score: 32.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 1.1E-24
score: 89.0
IPR027065Lon proteasePANTHERPTHR43718FAMILY NOT NAMEDcoord: 1..73
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199988contigH-elongata_contig199988:208..429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199988.5629.1mRNA_H-elongata_contig199988.5629.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199988 208..429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199988.5629.1 ID=prot_H-elongata_contig199988.5629.1|Name=mRNA_H-elongata_contig199988.5629.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
DHYGLDDIKERILEFIAVGKLRGGVHGRILCFVGPPGVGKTSIGHSIAKA
LNREFYRFSVGGLRDVAEIKGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027065Lon_Prtase
IPR027417P-loop_NTPase