prot_H-elongata_contig19870.5571.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19870.5571.1
Unique Nameprot_H-elongata_contig19870.5571.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.800e-26
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITY---PDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEKTF 108
            +IVTVALVPP++GV  + V+HVLAV+TT EV +LA+TY   P  +GS RN R++V           RRT+F A T+GV+M KIA H NGR FMAG+DGNLYEL YSV   F
Sbjct:  126 VIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQV-----------RRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGF 225          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A2G5BCU2_COERN (Nucleoporin-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCU2_COERN)

HSP 1 Score: 75.5 bits (184), Expect = 1.200e-13
Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGS-GSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 105
            +IV+VA+V P+ GV  +++KHVL V+T  EV +L ++Y  G  G  R    EV ++          T    P +GVAMT + G A+GR FM+G DG LYE +Y  E
Sbjct:  116 IIVSVAMVKPKPGVFVDSIKHVLVVATPLEVFLLGVSYNIGRLGGARGDGGEVTLYA---------TQISVPADGVAMTSVVGTADGRVFMSGNDGALYEFVYQSE 212          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.650e-13
Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSV 104
            +IV V L  PR+GV K  VK++L V+T  EV ++A+T  DG G GR              + VR T F A ++GV M  I GH  GR FMAG+DGNLYEL+Y  
Sbjct:  131 VIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT--DG-GDGR--------------LDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEA 217          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A261XXE4_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXE4_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 2.230e-13
Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEKTF 108
            +IV+V LVPP+R V  + +++VL ++TT E+ +L ++  D SG+  ++R +        +++V + S   P++ V+MT I G A+GR FM G DG+LYE+ Y   +TF
Sbjct:  124 IIVSVGLVPPKRDVFVDGIEYVLVIATTLEIILLGVSTTDPSGAPSSYRGQK------LSLFVTQLS--VPSDDVSMTNIVGTADGRIFMCGDDGHLYEVTYKAAETF 223          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A437AZ50_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437AZ50_CHISP)

HSP 1 Score: 73.2 bits (178), Expect = 7.790e-13
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    2 IVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 105
            IV+V LV P+ GV +  VK++L ++TT E+ +L +T+      G +   E+        + V    F+ PT+G++M  +   ANGR FM G+DG LYE+ Y  +
Sbjct:  126 IVSVGLVKPKAGVFQSFVKYLLVLTTTVEIVVLGVTFSSSKTDGSSELQEI--------LLVPEPVFVLPTDGISMMSVKSTANGRIFMGGKDGCLYEITYQAQ 221          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: UPI00200EB858 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup154 n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI00200EB858)

HSP 1 Score: 69.7 bits (169), Expect = 1.280e-11
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
Query:    2 IVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 105
            IV+V L+ P+ GV +  VK++L ++TT E+ +L +T+      G N           +   V    F+ PT+GV+M  +   ANGR FM G+DG LYE+ Y  +
Sbjct:  144 IVSVGLIKPKPGVFQNFVKYLLVLTTTVEIVVLGVTFSSSKNEGDNFE---------EMHLVPEPVFVLPTDGVSMMSVKSTANGRIFMGGKDGCLYEITYQAQ 238          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A6A5C0M1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C0M1_NAEFO)

HSP 1 Score: 69.3 bits (168), Expect = 1.750e-11
Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDG---SGSGRNHRMEVGVWLGCK--AIYVRR----TSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEK 106
            +I++  LV P+ GV K+ VK++L ++T  EVA++A+T+ +    S SG  H  +  +    +  AIY       T+++ P++ V M KI G  NGR FM G+DG LYEL Y  E+
Sbjct:  136 VIISAGLVKPKPGVFKDYVKYLLVLATPVEVALVALTFNNNNVASPSGAAHLDQQHLTFDSQTGAIYSEMELFATNYIIPSDNVNMIKIVGTQNGRIFMCGKDGCLYELTYEPEE 250          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.760e-11
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYS 103
            +IV+VAL  P+ GV  +TVK+VL V++  EV +LA+T  +    G N ++               T++  P++ VAM K+ G  +GR FMAG DGN+YEL YS
Sbjct:  134 VIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDE---QGNNFKLVP-------------TAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYS 220          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: UPI0008F9906E (nuclear pore complex protein Nup155 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9906E)

HSP 1 Score: 68.9 bits (167), Expect = 2.390e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 0
Query:    2 IVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 105
            I+ V LV P+  V KE + H+L ++TT ++ +L +T    + S  N   E+         +     F  PT+GV +T IAG ANGR F+ G DGNLYE+ Y  E
Sbjct:  138 IMCVGLVKPKPNVFKEFITHLLVLATTVDIVVLGVTLSVPTDSVSNLINEIH--------FTPEVVFQLPTDGVNITAIAGSANGRIFLGGEDGNLYEIQYRKE 233          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A2A4K5N8_HELVI (Uncharacterized protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4K5N8_HELVI)

HSP 1 Score: 68.2 bits (165), Expect = 4.490e-11
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 0
Query:    2 IVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 105
            IV+V LV P+ GV +  VK++L ++TT E+ +L +T+            E+ +        V    F+ PT+G++M  +   ANGR FM G+DG LYE+ Y  +
Sbjct:  145 IVSVGLVKPKAGVFQNFVKYLLVLTTTVEIVVLGVTFSSSKNDCSGELQEIHL--------VPEPVFVLPTDGISMMCVKATANGRIFMGGKDGCLYEITYQAQ 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI1.800e-2656.76Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A2G5BCU2_COERN1.200e-1341.51Nucleoporin-domain-containing protein n=1 Tax=Coem... [more]
A0A835YRU3_9STRA1.650e-1346.15Nup133 N terminal like-domain-containing protein n... [more]
A0A261XXE4_9FUNG2.230e-1337.96Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A437AZ50_CHISP7.790e-1335.58Uncharacterized protein n=1 Tax=Chilo suppressalis... [more]
UPI00200EB8581.280e-1135.58LOW QUALITY PROTEIN: nuclear pore complex protein ... [more]
A0A6A5C0M1_NAEFO1.750e-1138.26Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A7S3M7K2_9STRA1.760e-1140.78Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI0008F9906E2.390e-1138.46nuclear pore complex protein Nup155 n=1 Tax=Bemisi... [more]
A0A2A4K5N8_HELVI4.490e-1134.62Uncharacterized protein n=1 Tax=Heliothis virescen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 2..106
e-value: 3.6E-11
score: 42.5
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 2..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19870contigH-elongata_contig19870:5485..6476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19870.5571.1mRNA_H-elongata_contig19870.5571.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19870 5482..6476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19870.5571.1 ID=prot_H-elongata_contig19870.5571.1|Name=mRNA_H-elongata_contig19870.5571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRM
EVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYEL
LYSVEKTF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155