mRNA_H-elongata_contig19870.5571.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19870.5571.1
Unique NamemRNA_H-elongata_contig19870.5571.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.910e-27
Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITY---PDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEKTF 327
            Q+IVTVALVPP++GV  + V+HVLAV+TT EV +LA+TY   P  +GS RN R++V           RRT+F A T+GV+M KIA H NGR FMAG+DGNLYEL YSV   F
Sbjct:  125 QVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQV-----------RRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGF 225          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.830e-17
Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKA-IYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEKTF 327
            Q+IV+VALVPPR GV +E VK++LAV+T  E+ +LA+ + +  G+G      +G  LG    + +R TSF   ++ V M K+ G  +GR FM G DG+LYE LY+ E+ F
Sbjct:   89 QIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFEEPEGTG-----VLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEF 193          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A2G5BCU2_COERN (Nucleoporin-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCU2_COERN)

HSP 1 Score: 77.8 bits (190), Expect = 1.930e-14
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGS-GSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 318
            Q+IV+VA+V P+ GV  +++KHVL V+T  EV +L ++Y  G  G  R    EV ++          T    P +GVAMT + G A+GR FM+G DG LYE +Y  E
Sbjct:  115 QIIVSVAMVKPKPGVFVDSIKHVLVVATPLEVFLLGVSYNIGRLGGARGDGGEVTLYA---------TQISVPADGVAMTSVVGTADGRVFMSGNDGALYEFVYQSE 212          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.650e-14
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSV 315
            Q+IV V L  PR+GV K  VK++L V+T  EV ++A+T  DG G GR              + VR T F A ++GV M  I GH  GR FMAG+DGNLYEL+Y  
Sbjct:  130 QVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT--DG-GDGR--------------LDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEA 217          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A261XXE4_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXE4_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 3.590e-14
Identity = 42/109 (38.53%), Postives = 70/109 (64.22%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEKTF 327
            Q+IV+V LVPP+R V  + +++VL ++TT E+ +L ++  D SG+  ++R +        +++V + S   P++ V+MT I G A+GR FM G DG+LYE+ Y   +TF
Sbjct:  123 QIIVSVGLVPPKRDVFVDGIEYVLVIATTLEIILLGVSTTDPSGAPSSYRGQK------LSLFVTQLS--VPSDDVSMTNIVGTADGRIFMCGDDGHLYEVTYKAAETF 223          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A437AZ50_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437AZ50_CHISP)

HSP 1 Score: 73.9 bits (180), Expect = 4.340e-13
Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 318
            + IV+V LV P+ GV +  VK++L ++TT E+ +L +T+      G +   E+        + V    F+ PT+G++M  +   ANGR FM G+DG LYE+ Y  +
Sbjct:  124 ETIVSVGLVKPKAGVFQSFVKYLLVLTTTVEIVVLGVTFSSSKTDGSSELQEI--------LLVPEPVFVLPTDGISMMSVKSTANGRIFMGGKDGCLYEITYQAQ 221          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A6A5C0M1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C0M1_NAEFO)

HSP 1 Score: 71.6 bits (174), Expect = 2.800e-12
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDG---SGSGRNHRMEVGVWLGCK--AIYVRR----TSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVEK 321
            Q+I++  LV P+ GV K+ VK++L ++T  EVA++A+T+ +    S SG  H  +  +    +  AIY       T+++ P++ V M KI G  NGR FM G+DG LYEL Y  E+
Sbjct:  135 QVIISAGLVKPKPGVFKDYVKYLLVLATPVEVALVALTFNNNNVASPSGAAHLDQQHLTFDSQTGAIYSEMELFATNYIIPSDNVNMIKIVGTQNGRIFMCGKDGCLYELTYEPEE 250          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: UPI00200EB858 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup154 n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI00200EB858)

HSP 1 Score: 70.5 bits (171), Expect = 7.140e-12
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 318
            + IV+V L+ P+ GV +  VK++L ++TT E+ +L +T+      G N           +   V    F+ PT+GV+M  +   ANGR FM G+DG LYE+ Y  +
Sbjct:  142 ETIVSVGLIKPKPGVFQNFVKYLLVLTTTVEIVVLGVTFSSSKNEGDNFE---------EMHLVPEPVFVLPTDGVSMMSVKSTANGRIFMGGKDGCLYEITYQAQ 238          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.190e-12
Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYS 312
            ++IV+VAL  P+ GV  +TVK+VL V++  EV +LA+T  +    G N ++               T++  P++ VAM K+ G  +GR FMAG DGN+YEL YS
Sbjct:  133 EVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDE---QGNNFKLVP-------------TAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYS 220          
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Match: UPI0008F9906E (nuclear pore complex protein Nup155 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9906E)

HSP 1 Score: 69.7 bits (169), Expect = 1.330e-11
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
Query:    1 QMIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRMEVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYELLYSVE 318
            + I+ V LV P+  V KE + H+L ++TT ++ +L +T    + S  N   E+         +     F  PT+GV +T IAG ANGR F+ G DGNLYE+ Y  E
Sbjct:  136 ETIMCVGLVKPKPNVFKEFITHLLVLATTVDIVVLGVTLSVPTDSVSNLINEIH--------FTPEVVFQLPTDGVNITAIAGSANGRIFLGGEDGNLYEIQYRKE 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19870.5571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI2.910e-2757.14Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A7R9YE90_9STRA3.830e-1744.55Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2G5BCU2_COERN1.930e-1442.06Nucleoporin-domain-containing protein n=1 Tax=Coem... [more]
A0A835YRU3_9STRA2.650e-1446.67Nup133 N terminal like-domain-containing protein n... [more]
A0A261XXE4_9FUNG3.590e-1438.53Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A437AZ50_CHISP4.340e-1334.91Uncharacterized protein n=1 Tax=Chilo suppressalis... [more]
A0A6A5C0M1_NAEFO2.800e-1238.79Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
UPI00200EB8587.140e-1234.91LOW QUALITY PROTEIN: nuclear pore complex protein ... [more]
A0A7S3M7K2_9STRA7.190e-1240.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI0008F9906E1.330e-1137.74nuclear pore complex protein Nup155 n=1 Tax=Bemisi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19870contigH-elongata_contig19870:5482..6476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue4.4e-23
Seed eggNOG ortholog2880.D7G0M6
Preferred nameNUP155
KEGG koko:K14312
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000972,GO:0001508,GO:0001555,GO:0001654,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003674,GO:0003682,GO:0005198,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005730,GO:0005737,GO:0005886,GO:0005911,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006936,GO:0006941,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007051,GO:0007053,GO:0007088,GO:0007096,GO:0007140,GO:0007154,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007295,GO:0007300,GO:0007303,GO:0007346,GO:0007423,GO:0007444,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0009506,GO:0009507,GO:0009536,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0009994,GO:0010256,GO:0010467,GO:0010564,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016049,GO:0016482,GO:0017038,GO:0017056,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030029,GO:0030036,GO:0030048,GO:0030054,GO:0030154,GO:0030715,GO:0030717,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0035220,GO:0035295,GO:0035637,GO:0036228,GO:0040007,GO:0042127,GO:0042306,GO:0042307,GO:0042391,GO:0042886,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043902,GO:0044057,GO:0044085,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044611,GO:0044703,GO:0045184,GO:0045477,GO:0045595,GO:0046822,GO:0046824,GO:0046907,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0051028,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051276,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0051726,GO:0051783,GO:0055044,GO:0055049,GO:0055050,GO:0060047,GO:0060048,GO:0060284,GO:0060341,GO:0060429,GO:0061024,GO:0061337,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070201,GO:0070252,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072657,GO:0086001,GO:0086002,GO:0086003,GO:0086014,GO:0086019,GO:0086026,GO:0086065,GO:0086066,GO:0090087,GO:0090306,GO:0090316,GO:0090435,GO:0097435,GO:0140013,GO:1900180,GO:1900182,GO:1901987,GO:1901990,GO:1903046,GO:1903522,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904748,GO:1904951,GO:1905475,GO:1905879,GO:1905936,GO:1905938,GO:2000241,GO:2000243
EggNOG free text desc.protein localization to nuclear inner membrane
EggNOG OGsCOG5308@1,KOG1900@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Hectar predicted targeting categoryother localisation
Exons2
Model size327
Cds size324
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19870.5571.1prot_H-elongata_contig19870.5571.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19870 5485..6476 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930121.6746573-UTR-H-elongata_contig19870:5481..54841622930121.6746573-UTR-H-elongata_contig19870:5481..5484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19870 5482..5484 +
1691679289.069723-UTR-H-elongata_contig19870:5481..54841691679289.069723-UTR-H-elongata_contig19870:5481..5484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19870 5482..5484 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930121.689899-CDS-H-elongata_contig19870:5484..56701622930121.689899-CDS-H-elongata_contig19870:5484..5670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19870 5485..5670 +
1691679289.0805972-CDS-H-elongata_contig19870:5484..56701691679289.0805972-CDS-H-elongata_contig19870:5484..5670Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19870 5485..5670 +
1622930121.7109554-CDS-H-elongata_contig19870:6338..64761622930121.7109554-CDS-H-elongata_contig19870:6338..6476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19870 6339..6476 +
1691679289.0886226-CDS-H-elongata_contig19870:6338..64761691679289.0886226-CDS-H-elongata_contig19870:6338..6476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19870 6339..6476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19870.5571.1

>prot_H-elongata_contig19870.5571.1 ID=prot_H-elongata_contig19870.5571.1|Name=mRNA_H-elongata_contig19870.5571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MIVTVALVPPRRGVLKETVKHVLAVSTTHEVAILAITYPDGSGSGRNHRM
EVGVWLGCKAIYVRRTSFLAPTNGVAMTKIAGHANGRAFMAGRDGNLYEL
LYSVEKTF
back to top

mRNA from alignment at H-elongata_contig19870:5482..6476+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19870.5571.1 ID=mRNA_H-elongata_contig19870.5571.1|Name=mRNA_H-elongata_contig19870.5571.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=995bp|location=Sequence derived from alignment at H-elongata_contig19870:5482..6476+ (Himanthalia elongata Himel1 dioecious)
CAGATGATCGTGACGGTGGCACTCGTGCCCCCCAGGAGAGGAGTTTTGAA AGAAACGGTGAAGCATGTTCTGGCGGTGTCAACAACTCATGAGGTGGCCA TCCTCGCAATCACGTACCCAGACGGTTCCGGTTCGGGTCGAAACCATCGC ATGGAGGTGGGTGTGTGGTTGGGGTGTAAGGCGATATATGTGTTGCAAAC ACCCTCTCAATATTAATTATTTTTAAGGGCAGTTAATCAGTCTACCCAAG CGACGAAGGTTCGCCGGTCCAACCTTGCAGCAACCGGCTGTTGTTGCTGT TGTTGGTCTCACTTTTAGCAGAAGGATTAACCGGATTTGGTTGCCTTCTG CTCGTGGTGTTTTTCCCTGTCCCCGATCGCGCCTGAGAATTTGGTCTCAC GAGACAGGTTTGACAGTCCCGTCCCAGCTGTATACCGTCACATAATATGA TCTTGCCTACCACCCATAACCTTCTGTGGACAGCTTTTACCATCTAACCT CAACACCCGATACACCATCTAGCTCTCACTCGTACGATAGGCCTTAGTGG CCACGCACGCCAGGTGTACCCCTACCTGTGCCTGTGACTTATCGTTTTCG ATTCTCCCCCCTTCCTAGATGTCAAATAGATGCAGCACACGTATGTCACG GTGACAGCGGCGGCCTGGGTTTTCACTGCATACATGGTGGCTTGCATGAT TCGGGAAGGAAGGAGGGAGACGTTGAAATATAGTAGAAGCCAACAGCAAC AAGCAGCAAAGCTCCTGGGTGGGGGACCACGATGATGACCCCCCTTCCTT CCTTCCCATCACGTGATGGATTCTTGGTCCGCCTTGTGCCGTGCGTGAGG ACCGCAGGTTCGCCGTACTAGCTTCCTAGCTCCTACAAACGGAGTGGCTA TGACTAAGATCGCGGGCCATGCGAATGGGCGAGCGTTCATGGCGGGCAGG GACGGGAACCTTTATGAGCTCTTGTACTCGGTGGAGAAGACTTTT
back to top

Coding sequence (CDS) from alignment at H-elongata_contig19870:5482..6476+

>mRNA_H-elongata_contig19870.5571.1 ID=mRNA_H-elongata_contig19870.5571.1|Name=mRNA_H-elongata_contig19870.5571.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at H-elongata_contig19870:5482..6476+ (Himanthalia elongata Himel1 dioecious)
ATGATCGTGACGGTGGCACTCGTGCCCCCCAGGAGAGGAGTTTTGAAAGA
AACGGTGAAGCATGTTCTGGCGGTGTCAACAACTCATGAGGTGGCCATCC
TCGCAATCACGTACCCAGACGGTTCCGGTTCGGGTCGAAACCATCGCATG
GAGGTGGGTGTGTGGTTGGGGTGTAAGGCGATATATATGATCGTGACGGT
GGCACTCGTGCCCCCCAGGAGAGGAGTTTTGAAAGAAACGGTGAAGCATG
TTCTGGCGGTGTCAACAACTCATGAGGTGGCCATCCTCGCAATCACGTAC
CCAGACGGTTCCGGTTCGGGTCGAAACCATCGCATGGAGGTGGGTGTGTG
GTTGGGGTGTAAGGCGATATATGTTCGCCGTACTAGCTTCCTAGCTCCTA
CAAACGGAGTGGCTATGACTAAGATCGCGGGCCATGCGAATGGGCGAGCG
TTCATGGCGGGCAGGGACGGGAACCTTTATGAGCTCTTGTACTCGGTGGA
GAAGACTTTTGTTCGCCGTACTAGCTTCCTAGCTCCTACAAACGGAGTGG
CTATGACTAAGATCGCGGGCCATGCGAATGGGCGAGCGTTCATGGCGGGC
AGGGACGGGAACCTTTATGAGCTCTTGTACTCGGTGGAGAAGACTTTT
back to top