mRNA_H-elongata_contig198150.5545.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI) HSP 1 Score: 121 bits (303), Expect = 6.590e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQS 171
GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRN+AVDPVNDLQS
Sbjct: 35 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNSAVDPVNDLQS 91
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A835Z0Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q5_9STRA) HSP 1 Score: 101 bits (251), Expect = 8.170e-24 Identity = 47/56 (83.93%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQ 168
GDLDA+L YID+ GDVN RD +NNTPLHWACQESHFDIVGVLMSR A VDPVNDLQ
Sbjct: 13 GDLDAILTYIDEGGDVNCRDVNNNTPLHWACQESHFDIVGVLMSRGAHVDPVNDLQ 68
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A836C8I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I0_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.570e-18 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMS 132
GDLDA+L +ID+ GDVN RD +NNTPLHWACQESHFDIVGVLMS
Sbjct: 17 GDLDAILTFIDEGGDVNCRDANNNTPLHWACQESHFDIVGVLMS 60
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A0K9RE76_SPIOL (Protein kinase domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RE76_SPIOL) HSP 1 Score: 58.9 bits (141), Expect = 1.320e-8 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 GDLDALLQYIDDNG-DVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQSTPL 180
GDLD + + ++++G DVN RD DN TPLH A + + ++V +LMS A VDP + STPL
Sbjct: 89 GDLDGIKELVEESGADVNYRDMDNRTPLHVAACQGYVEVVNLLMSMKAEVDPKDRWGSTPL 149
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A7R9GBM5_9CRUS (Palmitoyltransferase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GBM5_9CRUS) HSP 1 Score: 58.2 bits (139), Expect = 2.490e-8 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 1 GDLDALLQYIDDNG-DVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVN-DLQSTPLHYA 189
G LD +++ +D G DVN RD + TPLHWA + D++ ++SR A +DPV +L+STP H+A
Sbjct: 27 GVLDRVVELVDGLGFDVNARDSEGITPLHWAAINNRKDVMNYMISRGAEIDPVGGELRSTPAHWA 91
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A6J1RSH4_FRAOC (Palmitoyltransferase n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1RSH4_FRAOC) HSP 1 Score: 57.4 bits (137), Expect = 4.650e-8 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVN-DLQSTPLHYA 189
G L+ Q ID+ D+NQRD +N T LHWA + +I+ +SR A VD V DL +TPLH+A
Sbjct: 32 GALERCKQLIDEGFDINQRDTENVTLLHWAAINNRKEIIRFYISRGALVDAVGGDLMATPLHWA 95
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: Q4L0H4_AGAAM (Membrane acyl-CoA binding protein n=1 Tax=Agave americana TaxID=39510 RepID=Q4L0H4_AGAAM) HSP 1 Score: 55.5 bits (132), Expect = 2.150e-7 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 141
G+ D LL++I++ VN RD + TPLHWA HF++V +L+SRNA
Sbjct: 237 GEADNLLRHIENGVPVNSRDSEGRTPLHWAVDRGHFNVVEILLSRNA 283
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A3S3PWC4_9ACAR (Palmitoyltransferase n=2 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWC4_9ACAR) HSP 1 Score: 55.5 bits (132), Expect = 2.220e-7 Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVN-DLQSTPLHYA 189
G + + + I+ DVNQRD +N T LHWA + +IV +S+NA +D + DL+STPLH+A
Sbjct: 60 GAITRVQELIEAGFDVNQRDSENVTLLHWAAINNRKEIVKYFLSKNAEIDAIGGDLKSTPLHWA 123
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A6P6YD17_DERPT (Palmitoyltransferase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YD17_DERPT) HSP 1 Score: 55.5 bits (132), Expect = 2.230e-7 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 16 LLQYIDDNG--DVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVN-DLQSTPLHYA 189
L Q + D+G DVNQRDR+N T LHWA + ++V +S+ A VD + DLQST LH+A
Sbjct: 103 LCQKLIDSGRYDVNQRDRENVTLLHWASINNRLELVNYFISKGAIVDAIGGDLQSTALHWA 163
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Match: A0A2E2R8Q7_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E2R8Q7_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 3.030e-7 Identity = 24/55 (43.64%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 1 GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDL 165
GDL + Y+D D+N RD + +TPLHWA E H DIV +L++R A V+ +++
Sbjct: 162 GDLAGVQAYLDAGVDINARDENGSTPLHWAALEGHKDIVELLINRGAEVNATSEI 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198150.5545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig198150.5545.1 >prot_H-elongata_contig198150.5545.1 ID=prot_H-elongata_contig198150.5545.1|Name=mRNA_H-elongata_contig198150.5545.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp GDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDback to top mRNA from alignment at H-elongata_contig198150:483..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig198150.5545.1 ID=mRNA_H-elongata_contig198150.5545.1|Name=mRNA_H-elongata_contig198150.5545.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=189bp|location=Sequence derived from alignment at H-elongata_contig198150:483..671+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig198150:483..671+ >mRNA_H-elongata_contig198150.5545.1 ID=mRNA_H-elongata_contig198150.5545.1|Name=mRNA_H-elongata_contig198150.5545.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig198150:483..671+ (Himanthalia elongata Himel1 dioecious)back to top |