prot_H-elongata_contig19800.5540.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19800.5540.1
Unique Nameprot_H-elongata_contig19800.5540.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length512
Homology
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: D7FI94_ECTSI (Intrafragellar transpot 52, osm-6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI94_ECTSI)

HSP 1 Score: 624 bits (1610), Expect = 3.610e-217
Identity = 355/537 (66.11%), Postives = 386/537 (71.88%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSP--------------DDA-ALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWS---GKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE-GAIDALP------GGNMSRGASLRPLSGADTRSFLDGSSGSGAKVSETSTPSGGFGGSRGILRRHDSIGSGSVVSG 512
            +F+ +K +L  GGSA FLLGEGGEERLGTNVNYLLEEYGMTVHKD VARATYHKYMHPKE FISHGIL P+I  MKD ASLSRRGG +                                        DDA A+ SGD   G+GGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWE  ++  P         G GGR G  GG      G+ P   DHE + AP SEP++ K PGRLLV+ SSDIFAD WLDKEENAKLCDVFMRWLLGEAGVRLP RREYE+S+ R VPNTESLADRLRCCLQESE LPKNFTKLFNDSLFGFDTKMIPETVEA+S LGVKHEPLTLIPP FE PLPQLSAAVF PI R+PPPPALDRFDLDEHFASDRIRLAQITNKC+  DL+Y+VRECGEIMGVT ELS+ S    GPM +LD VFKRLI FKMLNQE GA+DALP      GG    GA   P+            +G+ A  S TSTPS      RG  +R DS GSGS++SG
Sbjct:   74 EFEAVKSYLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVARATYHKYMHPKEAFISHGILNPEIARMKDAASLSRRGGHSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGD--AGHGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWERPMDAPP--GRKAGGDGAGGRRGLGGGGMGSSGGRVPRPEDHESEAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEAGVRLPRRREYEVSDSRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKCTPSDLEYYVRECGEIMGVTGELSEESPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPRGVGEFGGVSGMGAQNAPVG-----------AGAAAPASATSTPSERGSILRGQPQRQDSTGSGSLLSG 595          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A6H5JN49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN49_9PHAE)

HSP 1 Score: 529 bits (1362), Expect = 1.820e-179
Identity = 327/593 (55.14%), Postives = 361/593 (60.88%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSP----------------DDA-ALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWS---GKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNK-----------------------------------------------------------CSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE-GAIDALPGGNMSRGASLRPLSGADTRSFLDGSSGSGAK-VSETSTPSGGFGGSRGILRRHDSIGSGSVVSG 512
            +F+ +K +L  GGSA FLLGEGGEERLGTNVNYLLEEYGMTVHKD V                                         +  KPGS     +R  S ++                      DDA A+ SGD   G+GGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWE  ++V P         G GGR G  GG      G+ P   DHE + AP SEP++ K PGRLLV+ SSDIFAD WLDKEENAKLCDVFMRWLLGE GVRLP RREY +SE R VPNTESLADRLRCCLQESE LPKNFTKLFNDSLFGFDTKMIPETVEA+S LGVKHEPLTLIPP FE PLPQLSAAVF PI R+PPPPALDRFDLDEHFASDRIRLAQITNK                                                           C+  DL+Y+VRECGEIMGVT ELS++S    GPM +LD VFKRLI FKMLNQE GA+DALP G       +   SG       +  +G+GA   S TSTPS      RG  +R DS GSGS++SG
Sbjct:   69 EFEAVKSYLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVLWK--------------------------------------KRSKPGSSSGSGQRLGSASSXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGD--AGHGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWERPMDVPP--GRKAGGDGAGGRRGLGGGSMGSSGGRAPRPEDHESEAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEVGVRLPRRREYGVSESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKDKSTRGVPGNLRKLAATLNRDTAEVESGGTCVVSRMLDAFLLAMHTRRRTPRPGLRPTQCTPSDLEYYVRECGEIMGVTGELSEDSPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPRG-------VGEFSGVSGMGAQNAPAGAGAPPASATSTPSERGSILRGQPQRQDSTGSGSLLSG 612          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A836CAI6_9STRA (Intrafragellar transport 52, osm-6-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI6_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 4.470e-141
Identity = 231/444 (52.03%), Postives = 284/444 (63.96%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGD-LDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEG 443
            +F  IK +L GGGS A LL EGGE  LGTNVNYLLEE+G+ VH D V R  ++KY+HPKEVF+SHG+L P++  MK+  ++  +G   R    G                      +  L  D V   GGL FVYPYGA++TVQ+PA P+LSSGPISYPLNRP+A VWE            + R GG                                    PGRLLV+ S+++F+D W+DKEEN KL DV +RWLLGE GV+L  +REY+ISE   VPN+E+LADRLRCCLQE+E LP++FTKLFN++LF FD  +IPE V  Y  L VKHEPLTLIPP FE PLP L+ AVF P  R+PPPP LD FDLDEHFASD IRLAQ+TNKC+  D L+Y+++E GEI+GV  EL + S  P  P  IL  +F+RL+ FKMLNQEG
Sbjct:   64 EFASIKAYLNGGGSVAVLLAEGGEGHLGTNVNYLLEEFGVAVHADSVVRTAFYKYLHPKEVFVSHGVLNPELARMKNRCAVGTKG---RTRSAG---------------------QSRDLDADDVANGGGLAFVYPYGASLTVQAPAQPILSSGPISYPLNRPLAAVWE---------RPQQQRSGG------------------------------------PGRLLVVASTEMFSDEWIDKEENGKLWDVLVRWLLGEGGVKLDQQREYDISEYTRVPNSEALADRLRCCLQETEELPRDFTKLFNENLFKFDMDVIPEAVALYEQLDVKHEPLTLIPPTFECPLPPLNPAVFPPAPREPPPPPLDLFDLDEHFASDAIRLAQLTNKCAGSDDLEYYIKEGGEILGVIGELPEGS--PAEPKHILHHIFRRLVRFKMLNQEG 436          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2G7V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7V8_9STRA)

HSP 1 Score: 373 bits (958), Expect = 2.400e-121
Identity = 211/444 (47.52%), Postives = 267/444 (60.14%), Query Frame = 0
Query:    5 IKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKC--SAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAID 446
            +K+++  GGSA FL GEGGE  LGTN+N ++EE+GM ++ D V R  Y+KY++PKEVFIS+GIL P +  +K+  +              +  NG                              GL FV+PYG+TMTVQ PA  VLSSGPISYPLNRP+A V+E         N          RAG +                              GR++V+ S  +F+D W+DKEEN+KL DV  RWL+ E  V L  R++ E+SE   +PNT+ LA+RLR CLQESE LPK+F KLFND+LF FDT +IPE V  Y  LGVKHEPL+LIPP+FE PLP L+ AVF P  R+ PPPALD+FDLDEHFAS R RLAQITNKC  SA DLDY+V+E GEI+GVT +L  +    T    IL F+F+ L+ FK +NQEG +D
Sbjct:   97 LKEYVNNGGSALFLAGEGGETALGTNLNAVMEEWGMQINDDAVVRTVYYKYLYPKEVFISNGILQPSVAALKNANAXXXXXXXXXXXXVDTSNNG------------------------------GLNFVFPYGSTMTVQRPALAVLSSGPISYPLNRPIAAVYESPDPAPAEAN----------RAGKR------------------------------GRVMVVSSLKVFSDEWIDKEENSKLADVLFRWLMQEKDVSLEDRKDAELSEYTRIPNTKVLAERLRSCLQESEELPKDFQKLFNDTLFKFDTNLIPEAVALYEQLGVKHEPLSLIPPQFETPLPPLNPAVFPPALRELPPPALDQFDLDEHFASPRQRLAQITNKCTGSADDLDYYVKESGEILGVTQQLGDDPSQKTAK-HILSFIFEELVKFKSVNQEGPLD 469          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2D5V8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5V8_9STRA)

HSP 1 Score: 370 bits (950), Expect = 2.100e-119
Identity = 205/462 (44.37%), Postives = 282/462 (61.04%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPGGNMSRGASLRPL 462
            +   +  ++  GGSA FL GE  +E L  N+N  + E+G+ V+KD V R  Y+KY++PKEVFI++GIL P I +MK+ A  + +G                +S S+  AI +S              YGGL FV+P+GA++ V+ PA  +LSSGPISYPLNRP+A V+E +   +P   TD + +                         +  P+++    KTPGR++VLGS  +F+D W+DKEEN KL DV +RWLL E+GV L   ++ ++SE   VP+T+ LA R+R CLQE+E LPK+F KLFND LF FDT +IPE +  Y  LGVKHEP++LIPP+FE PLP L+ AVF    R+    ALD+FDLDEHFAS R RLAQ+TNKC+  DLDY+V+ECG+I+GVT  L  +    T   DIL FVF+ L+ FK +NQ+      P  +++ G    P+
Sbjct:   85 EISELSAYIRAGGSALFLAGENMDEILLDNLNTAISEFGIVVNKDSVVRTVYYKYLYPKEVFIANGILQPSIASMKNVAVKAGKGS---------------KSKSVEKAIDTS-------------NYGGLNFVFPFGASLNVERPALAILSSGPISYPLNRPIAAVYEAEPASAPEPKTDSNTM------------------------MEPPPYTKRRARKTPGRVMVLGSLKMFSDEWIDKEENGKLSDVLVRWLLHESGVELHHVKDSDLSEYVRVPDTKVLATRIRSCLQENEELPKDFQKLFNDKLFKFDTHLIPEAIALYDKLGVKHEPMSLIPPQFETPLPPLAPAVFXXXLREXXXXALDQFDLDEHFASPRQRLAQLTNKCNPDDLDYYVKECGDIIGVTQALGDSGKVVTAA-DILSFVFEELVKFKSVNQDDLAMVPPLSDVAGGGGGEPV 493          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2W697_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W697_9STRA)

HSP 1 Score: 360 bits (925), Expect = 2.810e-116
Identity = 209/451 (46.34%), Postives = 273/451 (60.53%), Query Frame = 0
Query:    5 IKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSA-GDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPGGNMS 454
            +K F+E GGS  FL GEGG+   G+N+N +   +GMTV  D V R  Y+KY++PKEVFI++G+L P I   K+  +++     ++  KP                    P D A          GGL FVYPYGAT+ +QSPA  VLSSGPISYPLNRPVA  +E       R + +E++                                E   P+  GR++V+GSS IF+D WLDKEENAKL DV + WLL +  V +  R+E +I++   +P+T++LA+R+R CLQESE LPK+F KLFND+LF FDT +IPE V  Y  LGVKHEPL++IPPEFE PLP L+ AVF P  R+ PPPALD+FDLDE FAS + RLAQ+TNKC    DLDYFVRE GEI+GVT +L     G      IL+F+ + L+ FK +NQ+G   A+ GG  +
Sbjct:   76 LKGFVERGGSILFLAGEGGDAATGSNLNDVTSHFGMTVRNDSVVRTVYYKYLYPKEVFIANGVLQPSIAQSKNVTAMA-----SKRSKP--------------TPAMDKPVDTA--------NNGGLNFVYPYGATLELQSPAMGVLSSGPISYPLNRPVAAAYESPTIA--RFSEEEAQ--------------------------------EAGAPRR-GRVVVVGSSKIFSDDWLDKEENAKLADVLICWLLHQKDVAIEARKEADINDYMHIPSTQALAERVRSCLQESEELPKDFQKLFNDTLFKFDTDLIPEAVALYDKLGVKHEPLSVIPPEFESPLPPLNPAVFPPSLRELPPPALDQFDLDEQFASPKQRLAQLTNKCHGPDDLDYFVRESGEIIGVTQQLE----GQKTSKHILNFILQELVKFKSINQDGGGGAVGGGGFA 460          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: H3GGX9_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GGX9_PHYRM)

HSP 1 Score: 353 bits (907), Expect = 4.230e-113
Identity = 196/448 (43.75%), Postives = 268/448 (59.82%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGV--KGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWR--REYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGA 444
            +F  +K+FL GGGS   +LGEGGE+   TN+N  L+E+G+ V+ D V R  YHKY HPKEV IS G++  ++  M +E                     + R   L +   + P  A      G   K   GLTFVYPYGAT+TV+ PA P+LSSG ISYP+NRPV   W+                        +GG                   + P+     GRL+V GS+  F D W+DKEEN KL ++  RWLL + G++L  +   + +++E   +P+T++L+DRLR C+QESE LPK+FT+LF+D+LF FDT +IPE V  Y  LGVKHEPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+VRE  +I+G+   L       +    +L+F+F+++++FK LNQ+ A
Sbjct:   75 EFATLKEFLNGGGSILLMLGEGGEQTFDTNLNGWLKEFGIFVNPDAVIRTVYHKYHHPKEVLISSGVVNRELARMVNEM--------------------YGRKDLLGSGRDTVPGVAKPTGPGGALEKDQKGLTFVYPYGATLTVKKPAAPLLSSGFISYPVNRPVVAAWQ------------------------EGG------------------VALPASASKSGRLIVFGSAQCFTDEWIDKEENTKLQEIIFRWLLKDKGIKLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDALFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVRESADILGILPRLDPER---SDAKHVLEFIFQKIVNFKKLNQDSA 457          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A812SV39_9DINO (Ift52 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SV39_9DINO)

HSP 1 Score: 348 bits (893), Expect = 8.230e-112
Identity = 194/444 (43.69%), Postives = 261/444 (58.78%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLL--GEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE 442
            +F  +KD+L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D V R  YHKY HPKE  I+HG +  D+V   +        G  + EK          +  LA  I+    +   L+ D     GGL FV+PYGAT+  Q PA P+LSSGPISYPLNRP+  +               ++VG                                      GR+ V+GS  +F D +LD E+N +L D  +RWLL  G+  +   +  E E+SE   +P+T+ LA  LR CLQE+E LP++FT+LF+DSLF FDT +IPE V+ Y  LGVKHEPLTLIPP+FE P+P L  AVF P  R+PPPP+LD FDLDE FAS+R+RLAQ+TNKC+  DLD+++R+ GEI+GV+ +L            I++++FK L+ FK +NQ+
Sbjct:   80 EFTALKDYLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRSAN--------GEKKKEK--------ENNDKLALNITKEDAETVTLTKDD----GGLEFVFPYGATLNAQKPAIPILSSGPISYPLNRPIGAI--------------HNKVG-------------------------------------MGRICVIGSVHMFGDDFLDCEKNRQLVDTLVRWLLRLGDCELSYAYGEEPELSEYHHIPHTQGLAMNLRSCLQENEQLPRDFTQLFDDSLFKFDTDLIPEAVKLYHQLGVKHEPLTLIPPQFETPMPALQPAVFPPCLREPPPPSLDLFDLDEQFASERVRLAQLTNKCTDDDLDFYIRQAGEILGVSQKLGDKRSSKDPAKKIVEYIFKELVGFKKMNQD 452          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: K3WSL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSL2_GLOUD)

HSP 1 Score: 349 bits (896), Expect = 1.060e-111
Identity = 199/476 (41.81%), Postives = 279/476 (58.61%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPW--RREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDA--LPGGNMSRGASLRPLSGADTRSFLD 472
            +F  +K+FL GGGS   +LGEGGE+   TN+N  L++YG+ V+ D V R  YHKY HPKEV IS+G++  +I  M +E S  +    T  + PG+                              K   GL+FVYPYGAT+ V+ P+ P+LS+G ISYP+NRPV  VW+                        +GG                   S PS     GRL+V GS+  F D W+DKEENAKL +V  RWLL +  +        + ++SE   +P+T++L++RLR C+QESE LPK+FT+LF+DSLF FDT +IPE V  +  LGVK+EPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+V+E  +I+G+ ++L  +         IL+F+F++++ FK LNQ+  +        + ++G+ L+  S + +R F D
Sbjct:   82 EFATLKEFLHGGGSILMMLGEGGEQSFDTNLNGWLKDYGIFVNPDAVIRTVYHKYHHPKEVLISNGVVNREIARMVNELSGKKDMMFT-GDFPGNENKAHNLE----------------------KDQKGLSFVYPYGATLNVKKPSAPILSTGYISYPVNRPVVAVWQ------------------------EGG------------------ISAPSHSVKSGRLVVFGSAQCFTDDWIDKEENAKLQEVVFRWLLKDKAINFNAVDAEDPDLSEYNRLPDTQALSERLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVSLHRELGVKYEPLTLIPPQFECPLPPLKSAVFPPTLREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVKESADILGILSKLDSDR---NDAKHILEFIFQKIVHFKKLNQDAPVTVGNAVSSSSAKGSPLQHSSSSSSRGFGD 489          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A0P1APT5_PLAHL (Intraflagellar transport protein 52 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APT5_PLAHL)

HSP 1 Score: 347 bits (891), Expect = 5.450e-111
Identity = 193/448 (43.08%), Postives = 264/448 (58.93%), Query Frame = 0
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGV--KGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWR--REYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGA 444
            +F  +KDFL  GGS   +LGEGGE++  TN+N  L+++G+ V+ D V R  YHKY HPKEV +S G++  ++  M +E                     F R   L      S  D  +   DG   K   GL+FVYPYGAT+ V+ PA  +LSSG +SYP+NRPVA  W+ +   +P   +                                            GRL+V GS+  F D W+DKEENAKL ++  RWLL +  + L  +   + +++E   +P+T++L+DRLR C+QESE LPK+FT+LF+DSLF FDT +IPE V  Y  LGVKHEPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+VRE  +I+G+   L+      +    IL+F+ ++++SFK LNQ+ A
Sbjct:   76 EFATLKDFLSSGGSILLMLGEGGEQQFDTNLNGWLKDFGIFVNPDAVIRTVYHKYHHPKEVLVSRGVVNRELTRMANEL--------------------FSRKDVLM-----SGRDLKVTGSDGAPEKDQKGLSFVYPYGATLNVKKPAATLLSSGSVSYPVNRPVAAAWQERGVAAPASKS--------------------------------------------GRLIVFGSTQCFVDEWIDKEENAKLQEIIFRWLLKDKTINLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVNLYHDLGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASETLRLAQLTNKCSDEDLEYYVRESADILGIMPRLNPER---SDAKHILEFITQKIVSFKKLNQDTA 451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI94_ECTSI3.610e-21766.11Intrafragellar transpot 52, osm-6-like protein n=1... [more]
A0A6H5JN49_9PHAE1.820e-17955.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAI6_9STRA4.470e-14152.03Intrafragellar transport 52, osm-6-like protein (F... [more]
A0A7S2G7V8_9STRA2.400e-12147.52Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2D5V8_9STRA2.100e-11944.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W697_9STRA2.810e-11646.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3GGX9_PHYRM4.230e-11343.75Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A812SV39_9DINO8.230e-11243.69Ift52 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
K3WSL2_GLOUD1.060e-11141.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1APT5_PLAHL5.450e-11143.08Intraflagellar transport protein 52 homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12969:SF7INTRAFLAGELLAR TRANSPORT PROTEIN 52 HOMOLOGcoord: 2..446
IPR039975Intraflagellar transport protein 52 homologPANTHERPTHR12969NGD5/OSM-6/IFT52coord: 2..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19800contigH-elongata_contig19800:2590..6857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19800.5540.1mRNA_H-elongata_contig19800.5540.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19800 2590..6857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19800.5540.1 ID=prot_H-elongata_contig19800.5540.1|Name=mRNA_H-elongata_contig19800.5540.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=512bp
QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARA
TYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGF
RRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPV
LSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSG
KHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLC
DVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLP
KNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQL
SAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVR
ECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPG
GNMSRGASLRPLSGADTRSFLDGSSGSGAKVSETSTPSGGFGGSRGILRR
HDSIGSGSVVSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039975IFT52