mRNA_H-elongata_contig19800.5540.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19800.5540.1
Unique NamemRNA_H-elongata_contig19800.5540.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: D7FI94_ECTSI (Intrafragellar transpot 52, osm-6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI94_ECTSI)

HSP 1 Score: 624 bits (1610), Expect = 3.610e-217
Identity = 355/537 (66.11%), Postives = 386/537 (71.88%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSP--------------DDA-ALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWS---GKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE-GAIDALP------GGNMSRGASLRPLSGADTRSFLDGSSGSGAKVSETSTPSGGFGGSRGILRRHDSIGSGSVVSG 1536
            +F+ +K +L  GGSA FLLGEGGEERLGTNVNYLLEEYGMTVHKD VARATYHKYMHPKE FISHGIL P+I  MKD ASLSRRGG +                                        DDA A+ SGD   G+GGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWE  ++  P         G GGR G  GG      G+ P   DHE + AP SEP++ K PGRLLV+ SSDIFAD WLDKEENAKLCDVFMRWLLGEAGVRLP RREYE+S+ R VPNTESLADRLRCCLQESE LPKNFTKLFNDSLFGFDTKMIPETVEA+S LGVKHEPLTLIPP FE PLPQLSAAVF PI R+PPPPALDRFDLDEHFASDRIRLAQITNKC+  DL+Y+VRECGEIMGVT ELS+ S    GPM +LD VFKRLI FKMLNQE GA+DALP      GG    GA   P+            +G+ A  S TSTPS      RG  +R DS GSGS++SG
Sbjct:   74 EFEAVKSYLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVARATYHKYMHPKEAFISHGILNPEIARMKDAASLSRRGGHSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGD--AGHGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWERPMDAPP--GRKAGGDGAGGRRGLGGGGMGSSGGRVPRPEDHESEAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEAGVRLPRRREYEVSDSRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKCTPSDLEYYVRECGEIMGVTGELSEESPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPRGVGEFGGVSGMGAQNAPVG-----------AGAAAPASATSTPSERGSILRGQPQRQDSTGSGSLLSG 595          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A6H5JN49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN49_9PHAE)

HSP 1 Score: 529 bits (1362), Expect = 1.820e-179
Identity = 327/593 (55.14%), Postives = 361/593 (60.88%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSP----------------DDA-ALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWS---GKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNK-----------------------------------------------------------CSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE-GAIDALPGGNMSRGASLRPLSGADTRSFLDGSSGSGAK-VSETSTPSGGFGGSRGILRRHDSIGSGSVVSG 1536
            +F+ +K +L  GGSA FLLGEGGEERLGTNVNYLLEEYGMTVHKD V                                         +  KPGS     +R  S ++                      DDA A+ SGD   G+GGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWE  ++V P         G GGR G  GG      G+ P   DHE + AP SEP++ K PGRLLV+ SSDIFAD WLDKEENAKLCDVFMRWLLGE GVRLP RREY +SE R VPNTESLADRLRCCLQESE LPKNFTKLFNDSLFGFDTKMIPETVEA+S LGVKHEPLTLIPP FE PLPQLSAAVF PI R+PPPPALDRFDLDEHFASDRIRLAQITNK                                                           C+  DL+Y+VRECGEIMGVT ELS++S    GPM +LD VFKRLI FKMLNQE GA+DALP G       +   SG       +  +G+GA   S TSTPS      RG  +R DS GSGS++SG
Sbjct:   69 EFEAVKSYLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVLWK--------------------------------------KRSKPGSSSGSGQRLGSASSXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGD--AGHGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWERPMDVPP--GRKAGGDGAGGRRGLGGGSMGSSGGRAPRPEDHESEAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEVGVRLPRRREYGVSESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKDKSTRGVPGNLRKLAATLNRDTAEVESGGTCVVSRMLDAFLLAMHTRRRTPRPGLRPTQCTPSDLEYYVRECGEIMGVTGELSEDSPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPRG-------VGEFSGVSGMGAQNAPAGAGAPPASATSTPSERGSILRGQPQRQDSTGSGSLLSG 612          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A836CAI6_9STRA (Intrafragellar transport 52, osm-6-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI6_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 4.470e-141
Identity = 231/444 (52.03%), Postives = 284/444 (63.96%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGD-LDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEG 1329
            +F  IK +L GGGS A LL EGGE  LGTNVNYLLEE+G+ VH D V R  ++KY+HPKEVF+SHG+L P++  MK+  ++  +G   R    G                      +  L  D V   GGL FVYPYGA++TVQ+PA P+LSSGPISYPLNRP+A VWE            + R GG                                    PGRLLV+ S+++F+D W+DKEEN KL DV +RWLLGE GV+L  +REY+ISE   VPN+E+LADRLRCCLQE+E LP++FTKLFN++LF FD  +IPE V  Y  L VKHEPLTLIPP FE PLP L+ AVF P  R+PPPP LD FDLDEHFASD IRLAQ+TNKC+  D L+Y+++E GEI+GV  EL + S  P  P  IL  +F+RL+ FKMLNQEG
Sbjct:   64 EFASIKAYLNGGGSVAVLLAEGGEGHLGTNVNYLLEEFGVAVHADSVVRTAFYKYLHPKEVFVSHGVLNPELARMKNRCAVGTKG---RTRSAG---------------------QSRDLDADDVANGGGLAFVYPYGASLTVQAPAQPILSSGPISYPLNRPLAAVWE---------RPQQQRSGG------------------------------------PGRLLVVASTEMFSDEWIDKEENGKLWDVLVRWLLGEGGVKLDQQREYDISEYTRVPNSEALADRLRCCLQETEELPRDFTKLFNENLFKFDMDVIPEAVALYEQLDVKHEPLTLIPPTFECPLPPLNPAVFPPAPREPPPPPLDLFDLDEHFASDAIRLAQLTNKCAGSDDLEYYIKEGGEILGVIGELPEGS--PAEPKHILHHIFRRLVRFKMLNQEG 436          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2G7V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7V8_9STRA)

HSP 1 Score: 373 bits (958), Expect = 2.400e-121
Identity = 211/444 (47.52%), Postives = 267/444 (60.14%), Query Frame = 1
Query:   13 IKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKC--SAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAID 1338
            +K+++  GGSA FL GEGGE  LGTN+N ++EE+GM ++ D V R  Y+KY++PKEVFIS+GIL P +  +K+  +              +  NG                              GL FV+PYG+TMTVQ PA  VLSSGPISYPLNRP+A V+E         N          RAG +                              GR++V+ S  +F+D W+DKEEN+KL DV  RWL+ E  V L  R++ E+SE   +PNT+ LA+RLR CLQESE LPK+F KLFND+LF FDT +IPE V  Y  LGVKHEPL+LIPP+FE PLP L+ AVF P  R+ PPPALD+FDLDEHFAS R RLAQITNKC  SA DLDY+V+E GEI+GVT +L  +    T    IL F+F+ L+ FK +NQEG +D
Sbjct:   97 LKEYVNNGGSALFLAGEGGETALGTNLNAVMEEWGMQINDDAVVRTVYYKYLYPKEVFISNGILQPSVAALKNANAXXXXXXXXXXXXVDTSNNG------------------------------GLNFVFPYGSTMTVQRPALAVLSSGPISYPLNRPIAAVYESPDPAPAEAN----------RAGKR------------------------------GRVMVVSSLKVFSDEWIDKEENSKLADVLFRWLMQEKDVSLEDRKDAELSEYTRIPNTKVLAERLRSCLQESEELPKDFQKLFNDTLFKFDTNLIPEAVALYEQLGVKHEPLSLIPPQFETPLPPLNPAVFPPALRELPPPALDQFDLDEHFASPRQRLAQITNKCTGSADDLDYYVKESGEILGVTQQLGDDPSQKTAK-HILSFIFEELVKFKSVNQEGPLD 469          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2D5V8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5V8_9STRA)

HSP 1 Score: 370 bits (950), Expect = 2.100e-119
Identity = 205/462 (44.37%), Postives = 282/462 (61.04%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPGGNMSRGASLRPL 1386
            +   +  ++  GGSA FL GE  +E L  N+N  + E+G+ V+KD V R  Y+KY++PKEVFI++GIL P I +MK+ A  + +G                +S S+  AI +S              YGGL FV+P+GA++ V+ PA  +LSSGPISYPLNRP+A V+E +   +P   TD + +                         +  P+++    KTPGR++VLGS  +F+D W+DKEEN KL DV +RWLL E+GV L   ++ ++SE   VP+T+ LA R+R CLQE+E LPK+F KLFND LF FDT +IPE +  Y  LGVKHEP++LIPP+FE PLP L+ AVF    R+    ALD+FDLDEHFAS R RLAQ+TNKC+  DLDY+V+ECG+I+GVT  L  +    T   DIL FVF+ L+ FK +NQ+      P  +++ G    P+
Sbjct:   85 EISELSAYIRAGGSALFLAGENMDEILLDNLNTAISEFGIVVNKDSVVRTVYYKYLYPKEVFIANGILQPSIASMKNVAVKAGKGS---------------KSKSVEKAIDTS-------------NYGGLNFVFPFGASLNVERPALAILSSGPISYPLNRPIAAVYEAEPASAPEPKTDSNTM------------------------MEPPPYTKRRARKTPGRVMVLGSLKMFSDEWIDKEENGKLSDVLVRWLLHESGVELHHVKDSDLSEYVRVPDTKVLATRIRSCLQENEELPKDFQKLFNDKLFKFDTHLIPEAIALYDKLGVKHEPMSLIPPQFETPLPPLAPAVFXXXLREXXXXALDQFDLDEHFASPRQRLAQLTNKCNPDDLDYYVKECGDIIGVTQALGDSGKVVTAA-DILSFVFEELVKFKSVNQDDLAMVPPLSDVAGGGGGEPV 493          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A7S2W697_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W697_9STRA)

HSP 1 Score: 360 bits (925), Expect = 2.810e-116
Identity = 209/451 (46.34%), Postives = 273/451 (60.53%), Query Frame = 1
Query:   13 IKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSA-GDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPGGNMS 1362
            +K F+E GGS  FL GEGG+   G+N+N +   +GMTV  D V R  Y+KY++PKEVFI++G+L P I   K+  +++     ++  KP                    P D A          GGL FVYPYGAT+ +QSPA  VLSSGPISYPLNRPVA  +E       R + +E++                                E   P+  GR++V+GSS IF+D WLDKEENAKL DV + WLL +  V +  R+E +I++   +P+T++LA+R+R CLQESE LPK+F KLFND+LF FDT +IPE V  Y  LGVKHEPL++IPPEFE PLP L+ AVF P  R+ PPPALD+FDLDE FAS + RLAQ+TNKC    DLDYFVRE GEI+GVT +L     G      IL+F+ + L+ FK +NQ+G   A+ GG  +
Sbjct:   76 LKGFVERGGSILFLAGEGGDAATGSNLNDVTSHFGMTVRNDSVVRTVYYKYLYPKEVFIANGVLQPSIAQSKNVTAMA-----SKRSKP--------------TPAMDKPVDTA--------NNGGLNFVYPYGATLELQSPAMGVLSSGPISYPLNRPVAAAYESPTIA--RFSEEEAQ--------------------------------EAGAPRR-GRVVVVGSSKIFSDDWLDKEENAKLADVLICWLLHQKDVAIEARKEADINDYMHIPSTQALAERVRSCLQESEELPKDFQKLFNDTLFKFDTDLIPEAVALYDKLGVKHEPLSVIPPEFESPLPPLNPAVFPPSLRELPPPALDQFDLDEQFASPKQRLAQLTNKCHGPDDLDYFVRESGEIIGVTQQLE----GQKTSKHILNFILQELVKFKSINQDGGGGAVGGGGFA 460          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: H3GGX9_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GGX9_PHYRM)

HSP 1 Score: 353 bits (907), Expect = 4.230e-113
Identity = 196/448 (43.75%), Postives = 268/448 (59.82%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGV--KGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWR--REYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGA 1332
            +F  +K+FL GGGS   +LGEGGE+   TN+N  L+E+G+ V+ D V R  YHKY HPKEV IS G++  ++  M +E                     + R   L +   + P  A      G   K   GLTFVYPYGAT+TV+ PA P+LSSG ISYP+NRPV   W+                        +GG                   + P+     GRL+V GS+  F D W+DKEEN KL ++  RWLL + G++L  +   + +++E   +P+T++L+DRLR C+QESE LPK+FT+LF+D+LF FDT +IPE V  Y  LGVKHEPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+VRE  +I+G+   L       +    +L+F+F+++++FK LNQ+ A
Sbjct:   75 EFATLKEFLNGGGSILLMLGEGGEQTFDTNLNGWLKEFGIFVNPDAVIRTVYHKYHHPKEVLISSGVVNRELARMVNEM--------------------YGRKDLLGSGRDTVPGVAKPTGPGGALEKDQKGLTFVYPYGATLTVKKPAAPLLSSGFISYPVNRPVVAAWQ------------------------EGG------------------VALPASASKSGRLIVFGSAQCFTDEWIDKEENTKLQEIIFRWLLKDKGIKLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDALFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVRESADILGILPRLDPER---SDAKHVLEFIFQKIVNFKKLNQDSA 457          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A812SV39_9DINO (Ift52 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SV39_9DINO)

HSP 1 Score: 348 bits (893), Expect = 8.230e-112
Identity = 194/444 (43.69%), Postives = 261/444 (58.78%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLL--GEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQE 1326
            +F  +KD+L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D V R  YHKY HPKE  I+HG +  D+V   +        G  + EK          +  LA  I+    +   L+ D     GGL FV+PYGAT+  Q PA P+LSSGPISYPLNRP+  +               ++VG                                      GR+ V+GS  +F D +LD E+N +L D  +RWLL  G+  +   +  E E+SE   +P+T+ LA  LR CLQE+E LP++FT+LF+DSLF FDT +IPE V+ Y  LGVKHEPLTLIPP+FE P+P L  AVF P  R+PPPP+LD FDLDE FAS+R+RLAQ+TNKC+  DLD+++R+ GEI+GV+ +L            I++++FK L+ FK +NQ+
Sbjct:   80 EFTALKDYLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRSAN--------GEKKKEK--------ENNDKLALNITKEDAETVTLTKDD----GGLEFVFPYGATLNAQKPAIPILSSGPISYPLNRPIGAI--------------HNKVG-------------------------------------MGRICVIGSVHMFGDDFLDCEKNRQLVDTLVRWLLRLGDCELSYAYGEEPELSEYHHIPHTQGLAMNLRSCLQENEQLPRDFTQLFDDSLFKFDTDLIPEAVKLYHQLGVKHEPLTLIPPQFETPMPALQPAVFPPCLREPPPPSLDLFDLDEQFASERVRLAQLTNKCTDDDLDFYIRQAGEILGVSQKLGDKRSSKDPAKKIVEYIFKELVGFKKMNQD 452          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: K3WSL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSL2_GLOUD)

HSP 1 Score: 349 bits (896), Expect = 1.060e-111
Identity = 199/476 (41.81%), Postives = 279/476 (58.61%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPW--RREYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDA--LPGGNMSRGASLRPLSGADTRSFLD 1416
            +F  +K+FL GGGS   +LGEGGE+   TN+N  L++YG+ V+ D V R  YHKY HPKEV IS+G++  +I  M +E S  +    T  + PG+                              K   GL+FVYPYGAT+ V+ P+ P+LS+G ISYP+NRPV  VW+                        +GG                   S PS     GRL+V GS+  F D W+DKEENAKL +V  RWLL +  +        + ++SE   +P+T++L++RLR C+QESE LPK+FT+LF+DSLF FDT +IPE V  +  LGVK+EPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+V+E  +I+G+ ++L  +         IL+F+F++++ FK LNQ+  +        + ++G+ L+  S + +R F D
Sbjct:   82 EFATLKEFLHGGGSILMMLGEGGEQSFDTNLNGWLKDYGIFVNPDAVIRTVYHKYHHPKEVLISNGVVNREIARMVNELSGKKDMMFT-GDFPGNENKAHNLE----------------------KDQKGLSFVYPYGATLNVKKPSAPILSTGYISYPVNRPVVAVWQ------------------------EGG------------------ISAPSHSVKSGRLVVFGSAQCFTDDWIDKEENAKLQEVVFRWLLKDKAINFNAVDAEDPDLSEYNRLPDTQALSERLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVSLHRELGVKYEPLTLIPPQFECPLPPLKSAVFPPTLREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVKESADILGILSKLDSDR---NDAKHILEFIFQKIVHFKKLNQDAPVTVGNAVSSSSAKGSPLQHSSSSSSRGFGD 489          
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Match: A0A0P1APT5_PLAHL (Intraflagellar transport protein 52 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APT5_PLAHL)

HSP 1 Score: 347 bits (891), Expect = 5.450e-111
Identity = 193/448 (43.08%), Postives = 264/448 (58.93%), Query Frame = 1
Query:    1 QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARATYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGFRRSSSLAAAISSSPDDAALLSGDGV--KGYGGLTFVYPYGATMTVQSPAHPVLSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSGKHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLCDVFMRWLLGEAGVRLPWR--REYEISEIRTVPNTESLADRLRCCLQESEGLPKNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQLSAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVRECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGA 1332
            +F  +KDFL  GGS   +LGEGGE++  TN+N  L+++G+ V+ D V R  YHKY HPKEV +S G++  ++  M +E                     F R   L      S  D  +   DG   K   GL+FVYPYGAT+ V+ PA  +LSSG +SYP+NRPVA  W+ +   +P   +                                            GRL+V GS+  F D W+DKEENAKL ++  RWLL +  + L  +   + +++E   +P+T++L+DRLR C+QESE LPK+FT+LF+DSLF FDT +IPE V  Y  LGVKHEPLTLIPP+FE PLP L +AVF P  R+PPPPALD+FDLDEHFAS+ +RLAQ+TNKCS  DL+Y+VRE  +I+G+   L+      +    IL+F+ ++++SFK LNQ+ A
Sbjct:   76 EFATLKDFLSSGGSILLMLGEGGEQQFDTNLNGWLKDFGIFVNPDAVIRTVYHKYHHPKEVLVSRGVVNRELTRMANEL--------------------FSRKDVLM-----SGRDLKVTGSDGAPEKDQKGLSFVYPYGATLNVKKPAATLLSSGSVSYPVNRPVAAAWQERGVAAPASKS--------------------------------------------GRLIVFGSTQCFVDEWIDKEENAKLQEIIFRWLLKDKTINLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVNLYHDLGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASETLRLAQLTNKCSDEDLEYYVRESADILGIMPRLNPER---SDAKHILEFITQKIVSFKKLNQDTA 451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19800.5540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI94_ECTSI3.610e-21766.11Intrafragellar transpot 52, osm-6-like protein n=1... [more]
A0A6H5JN49_9PHAE1.820e-17955.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAI6_9STRA4.470e-14152.03Intrafragellar transport 52, osm-6-like protein (F... [more]
A0A7S2G7V8_9STRA2.400e-12147.52Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2D5V8_9STRA2.100e-11944.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W697_9STRA2.810e-11646.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3GGX9_PHYRM4.230e-11343.75Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A812SV39_9DINO8.230e-11243.69Ift52 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
K3WSL2_GLOUD1.060e-11141.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1APT5_PLAHL5.450e-11143.08Intraflagellar transport protein 52 homolog n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19800contigH-elongata_contig19800:2590..6857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score629.0
Seed ortholog evalue1.9e-177
Seed eggNOG ortholog2880.D7FI94
Preferred nameIFT52
KEGG koko:K19681
GOsGO:0001838,GO:0001841,GO:0001947,GO:0002009,GO:0003002,GO:0003007,GO:0003008,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007507,GO:0007600,GO:0008022,GO:0008150,GO:0008285,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009953,GO:0009987,GO:0010468,GO:0010970,GO:0015630,GO:0016043,GO:0016331,GO:0019222,GO:0021915,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030162,GO:0030326,GO:0030425,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032391,GO:0032501,GO:0032502,GO:0032991,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035148,GO:0035239,GO:0035295,GO:0035720,GO:0035735,GO:0035869,GO:0036064,GO:0036477,GO:0040011,GO:0042073,GO:0042127,GO:0042221,GO:0042330,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044292,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0048513,GO:0048519,GO:0048523,GO:0048562,GO:0048568,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048736,GO:0048856,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051171,GO:0051179,GO:0051234,GO:0051246,GO:0051641,GO:0051649,GO:0051716,GO:0060173,GO:0060255,GO:0060271,GO:0060429,GO:0060562,GO:0061371,GO:0065007,GO:0070613,GO:0070887,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0080090,GO:0097447,GO:0097458,GO:0097542,GO:0097546,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902074,GO:1902075,GO:1903317,GO:1905515
EggNOG free text desc.intraciliary anterograde transport
EggNOG OGsKOG3861@1,KOG3861@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size1536
Cds size1536
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930118.743476-CDS-H-elongata_contig19800:2589..28021622930118.743476-CDS-H-elongata_contig19800:2589..2802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 2590..2802 -
1691679287.875856-CDS-H-elongata_contig19800:2589..28021691679287.875856-CDS-H-elongata_contig19800:2589..2802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 2590..2802 -
1622930118.7847335-CDS-H-elongata_contig19800:3282..34381622930118.7847335-CDS-H-elongata_contig19800:3282..3438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 3283..3438 -
1691679287.8938642-CDS-H-elongata_contig19800:3282..34381691679287.8938642-CDS-H-elongata_contig19800:3282..3438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 3283..3438 -
1622930118.7992702-CDS-H-elongata_contig19800:3880..41651622930118.7992702-CDS-H-elongata_contig19800:3880..4165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 3881..4165 -
1691679287.903333-CDS-H-elongata_contig19800:3880..41651691679287.903333-CDS-H-elongata_contig19800:3880..4165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 3881..4165 -
1622930118.8132584-CDS-H-elongata_contig19800:4583..47361622930118.8132584-CDS-H-elongata_contig19800:4583..4736Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 4584..4736 -
1691679287.9142313-CDS-H-elongata_contig19800:4583..47361691679287.9142313-CDS-H-elongata_contig19800:4583..4736Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 4584..4736 -
1622930118.8280644-CDS-H-elongata_contig19800:5348..54491622930118.8280644-CDS-H-elongata_contig19800:5348..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 5349..5449 -
1691679287.9320695-CDS-H-elongata_contig19800:5348..54491691679287.9320695-CDS-H-elongata_contig19800:5348..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 5349..5449 -
1622930118.8451161-CDS-H-elongata_contig19800:5921..64081622930118.8451161-CDS-H-elongata_contig19800:5921..6408Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 5922..6408 -
1691679287.9426925-CDS-H-elongata_contig19800:5921..64081691679287.9426925-CDS-H-elongata_contig19800:5921..6408Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 5922..6408 -
1622930118.863896-CDS-H-elongata_contig19800:6716..68571622930118.863896-CDS-H-elongata_contig19800:6716..6857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 6717..6857 -
1691679287.9526072-CDS-H-elongata_contig19800:6716..68571691679287.9526072-CDS-H-elongata_contig19800:6716..6857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19800 6717..6857 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19800.5540.1prot_H-elongata_contig19800.5540.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19800 2590..6857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19800.5540.1

>prot_H-elongata_contig19800.5540.1 ID=prot_H-elongata_contig19800.5540.1|Name=mRNA_H-elongata_contig19800.5540.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=512bp
QFKVIKDFLEGGGSAAFLLGEGGEERLGTNVNYLLEEYGMTVHKDRVARA
TYHKYMHPKEVFISHGILIPDIVNMKDEASLSRRGGGTRAEKPGSRGNGF
RRSSSLAAAISSSPDDAALLSGDGVKGYGGLTFVYPYGATMTVQSPAHPV
LSSGPISYPLNRPVAGVWECQVEVSPRGNTDESRVGGGGRAGTKGGRWSG
KHPWSGDHEDKTAPFSEPSLPKTPGRLLVLGSSDIFADSWLDKEENAKLC
DVFMRWLLGEAGVRLPWRREYEISEIRTVPNTESLADRLRCCLQESEGLP
KNFTKLFNDSLFGFDTKMIPETVEAYSFLGVKHEPLTLIPPEFERPLPQL
SAAVFTPIFRDPPPPALDRFDLDEHFASDRIRLAQITNKCSAGDLDYFVR
ECGEIMGVTTELSQNSLGPTGPMDILDFVFKRLISFKMLNQEGAIDALPG
GNMSRGASLRPLSGADTRSFLDGSSGSGAKVSETSTPSGGFGGSRGILRR
HDSIGSGSVVSG
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mRNA from alignment at H-elongata_contig19800:2590..6857-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19800.5540.1 ID=mRNA_H-elongata_contig19800.5540.1|Name=mRNA_H-elongata_contig19800.5540.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4268bp|location=Sequence derived from alignment at H-elongata_contig19800:2590..6857- (Himanthalia elongata Himel1 dioecious)
CAGTTCAAAGTTATCAAGGATTTCCTGGAGGGCGGCGGAAGCGCGGCATT TTTGTTGGGGGAGGGAGGTGAAGAGCGACTGGGCACGAACGTCAACTACC TGTTGGAAGAGTATGGAATGACAGTGCACAAGGACAGGGTGGTGAGGAGC CATCAGCACAGAAGTTTCACTCTATTTTCTAAACAGCAGTCGAGTCAATG ATACACTCATAGATATAATAATATCAGTAGGCGCGGTGCACGGCTGTAGA TTTGTCCTGCAGGGGATCTAAGCCACTGGAGCCCTTCAAGAAAGATCATG TACGCCACTGTGGTTCCTTAAAGATCATGTGGTGCGCTGTTATCCCACGT GCCTCGATGGAGAGGGTATCCACCTCCAAAATATTGTGAACACTAGTATA CTCCTCGATACCCCCCTTCGCGATTATATCGGGCTGTAACCATTTACAGG CGCGTGCAACATACCACAAGTATATGCACCCAAAGGAAGTCTTCATTTCG CACGGTATCCTCATTCCGGATATCGTGAATATGAAAGACGAGGCATCTCT TTCACGACGAGGGGGGGGCACCCGCGCTGAAAAGCCAGGCAGTAGAGGCA ATGGATTCCGTCGCAGCAGCAGCCTTGCGGCGGCGATTTCTTCTTCGCCT GACGACGCTGCGCTGTTATCGGGCGACGGGGTGAAGGGCTACGGGGGCCT GACGTTCGTGTACCCGTACGGAGCGACGATGACCGTCCAATCACCGGCGC ATCCCGTGCTCTCGTCCGGGCCGATCTCGTATCCCCTGAATAGACCCGTG GCGGGTGTATGGGAATGCCAGGTGGAAGTATCTCCTCGAGGGAATACCGA TGAAAGCCGTGTCGGTGGTGGTGGGCGAGCGGGGACAAAAGGTGGAAGGT GGAGCGGAAAGCATCCTTGGTCAGGAGACCACGAAGGTATTATATTCATT TTGAAAACAAGAGGGAGCTCGGGACACGTTGGGAGGCACTAGGCCACGGC TGACAATGTCGTCTGTTTGACCCAGTGCAATGGAGGCAGATGTGTGCGGA GTGATGATGGCAGAGTTGAAGTCGCTTACGTGGGGGGTGGGCGATTGGTG CATCGATGAGACTTGCTGCACTGGGGTAGACGACGAAGAGGAACTTAAGT AAGCCGTGCCAAATTTGGATCCTCTCGTGGGATTACCAAGAGAGCTTCGA GCCATCATTCGTAGCGGCCACGAAACCTATTTCCTAGAAGAGCGTACACA ACAAGTAAATGGCGCTAGAAGAGGAACAGGTCAGCAATCGTTACCTATAT CTCCTCACGAATATTATCTCCATCCTTCTAATCAAGGTTTCGGTCACTCA GCAAGTATTTGGCTTACTCGCTCCTTTTGTCGTGTTTCTGGTCATGTCGC ACTTGCAGATAAGACAGCCCCGTTCTCAGAACCCTCGTTGCCAAAGACAC CAGGGCGACTGCTTGTCTTGGGCTCGAGTGATATATTTGCCGACTCTTGG CTTGACAAGGTAAAAAAAAATATTTATGTCTCGGTCGCATGCTGAAGCCC GGGTCTTACGGGCTGAGGAAGCGGAAATTTGAAACCTGAAAAAAAGAATG GAGAAATGTATCCATCCCCTAACGAGTTCTTTGTGTGACACGCCTTATTT GGATCTTCGGGGAAAGCCTTGAAGATCAGACCCGCATGTTTCTTTTTAGG GTGAGCGGGGGCGTTTGTTTCATCTTGAGCTTGTAAGGTTTGCCTTTGGT CGTCTAGGGAAACTTCGGCGAGCATATTTGATCGTAGCAGAGTGTAATTC TTGATGCGCCTAAGTACCGTTCTCGGCGTGTCGAAATAATCATACCTGCC TCCAACTCCGTCAGCACCTCCTATATATATATATGCTAACGACCGGAGCA GAGTGTAATTCTTGATGCGCCTAAATACCGTCCTCGGCGTGTCGAAATAA TCATACCTGCCTCCAACTCCGTCAGCACCTCCAACCGCGCGAATAGTGAC ACCTGCCGGAGCGTGTACAGCATAGGGTCCCGCTGCCATCACTCCCTCGC CATCGATAGAATGCGCTACCGTATGTGTCATACGTTTTGCTCTCTTCTTG TTTTGTATCCCCAACGGCCAGGAGGAGAACGCGAAGCTTTGTGACGTGTT CATGCGGTGGTTGCTTGGAGAGGCCGGAGTTCGGCTGCCGTGGCGTAGAG AGTACGAGATTTCCGAGATTCGGACGGTTCCGAACACGGAATCCCTAGCG GACCGCCTCCGATGCTGCTTGCAGGTAACTAGGGCGGCTGACCGACCAAA GAATAGCGCATATTTATTTTCGTTTCATATTCCGCTTCTCTGTGACAAGT AGAGCGGTGTGGCTGTGGGTGGCGATCTTCAGGGTACTTGGGGCTTATCA AAAGCTGCCTCGCGGTGAATCTAATCGAAGGACGCAGGGAGGGGTAATAA GAACGGCAAGCTACTTGGTAAACCCTCCCGCGAGCGAGAAGGAAGGAAGA GGAAAGGAAATTGATACTTCTTATCTGCACGAGAGTTATCCAACCCTCGC CCTTTTCACCACCTCCCCAAAAGGTCCCGCATCGACGATTATCCCTCCTC ACGAGCATTACAGCCCTGCCCATTTTCCGTTTGTTCACCAAAGCAAGTGC TCTCGTTCTTTCCATCTCCTTCGGTATGTCGTGTGTGACCAGGAATCCGA GGGTCTCCCGAAGAATTTCACAAAGCTCTTCAATGACTCGCTCTTCGGCT TCGACACTAAAATGATCCCGGAGACGGTCGAGGCGTATTCTTTTTTGGGG GTGAAGCACGAGCCCCTGACTCTCATACCTCCCGAGTTTGAGCGCCCTCT ACCCCAGCTGTCGGCCGCAGTTTTCACACCCATTTTCAGGGATCCTCCCC CGCCGGCATTGGACAGGTTCGACCTCGACGAGCACTTCGCCAGCGACCGC ATCCGCCTCGCACAGATCACCAACAAGGTTCGTTCAACTATGTCCCATTT CTCAGAATGAAGGCGCTCGTCGCTCCCTTTTGTTCACTGGAAATAGTTAA AGCAGAAGACTATCGCTGCGTAGAAAATGTTCAGCTTGTGGGGTACGGTG GGACAACGTATTCGCTTACGCGGGGGTATATGCTGCGCCAAAAGCAGCTA AACAACGCAAAATTATTTTTGGCTGGCAGTGAAACGAAAGGAGAGACACT CTTCATTGATAAGAAATAATAAATTGTGTACTCTCCATTGGTAGGAATAA TTAAGTGTGTAGTTTGGGTGGATTGCTCCGCAGTCGCAGCATACTTGGAT CGGTCTCTTAGTATATCTGAAACCTTTATATGCTAACACGAATGCTCACT CTAGATGACCGAGGGTTATTGAGTTTTGATCGAAATATAGAACCCTTTTG ACGTCGTCTCACTTCACAGTGCTCCGCCGGCGATTTGGATTACTTCGTGC GAGAGTGTGGAGAGATCATGGGTGTTACCACGGAGCTTTCCCAGAACTCA CTGGGACCGACGGGGCCAATGGACATCCTCGATTTTGTCTTCAAGCGACT CATCAGCTTTAAGATGCTCAACCAGGTAGCGGAAGATATTGGTCTAGGAC TTTGATTGTATTTGCTCCCAAACAACGTAGCGATAGTTTAAGTGGTATCT CCGTAGGATTTTCACTGGAGCAGGCACGGTTTGATGCAAGAGATTAATGG TGTTAGGTCCTCAGGTATTTCCGTAGAAATTACCCCCGTGACAGGCATGA TAGGCACAAAAGACCAGCGGCAGTAACTTCTTCCGGCTCGTCACTTTTTC CATCGCGTTTAGCTCATGATTGCTAAAGTTGCAAAAAAACGATAAGACTT CATCCTTTCGGGCGCAGTTTCGTGTGGGGGCAGCAAAACTCTAGTCCAAG GGGTGGCCACCAACGATAGTGCTCTCCGAGGTGAAGCTCCTTCCATTATG GCGGCAATCAGTTCTTCTGATAGTTGTTTCCGATCGACACAATCTCCTAA AACTCATTAAGTATCTTAACCTGAACCTTTCGGCCACTAACATCCCACCT CTCAGGAGGGAGCCATAGACGCCCTCCCCGGCGGGAATATGAGCCGGGGT GCATCGTTAAGACCACTTTCCGGAGCCGACACGCGGAGCTTTCTCGATGG TAGTTCTGGGAGCGGTGCCAAAGTTAGCGAAACGTCCACGCCATCGGGAG GCTTTGGTGGTTCACGGGGAATACTGCGGCGACATGATTCTATCGGAAGT GGGAGCGTTGTTAGTGGT
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Coding sequence (CDS) from alignment at H-elongata_contig19800:2590..6857-

>mRNA_H-elongata_contig19800.5540.1 ID=mRNA_H-elongata_contig19800.5540.1|Name=mRNA_H-elongata_contig19800.5540.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3072bp|location=Sequence derived from alignment at H-elongata_contig19800:2590..6857- (Himanthalia elongata Himel1 dioecious)
CAGTTCAAAGTTATCAAGGATTTCCTGGAGGGCGGCGGAAGCGCGGCATT
TTTGTTGGGGGAGGGAGGTGAAGAGCGACTGGGCACGAACGTCAACTACC
TGTTGGAAGAGTATGGAATGACAGTGCACAAGGACAGGGTGCAGTTCAAA
GTTATCAAGGATTTCCTGGAGGGCGGCGGAAGCGCGGCATTTTTGTTGGG
GGAGGGAGGTGAAGAGCGACTGGGCACGAACGTCAACTACCTGTTGGAAG
AGTATGGAATGACAGTGCACAAGGACAGGGTGGCGCGTGCAACATACCAC
AAGTATATGCACCCAAAGGAAGTCTTCATTTCGCACGGTATCCTCATTCC
GGATATCGTGAATATGAAAGACGAGGCATCTCTTTCACGACGAGGGGGGG
GCACCCGCGCTGAAAAGCCAGGCAGTAGAGGCAATGGATTCCGTCGCAGC
AGCAGCCTTGCGGCGGCGATTTCTTCTTCGCCTGACGACGCTGCGCTGTT
ATCGGGCGACGGGGTGAAGGGCTACGGGGGCCTGACGTTCGTGTACCCGT
ACGGAGCGACGATGACCGTCCAATCACCGGCGCATCCCGTGCTCTCGTCC
GGGCCGATCTCGTATCCCCTGAATAGACCCGTGGCGGGTGTATGGGAATG
CCAGGTGGAAGTATCTCCTCGAGGGAATACCGATGAAAGCCGTGTCGGTG
GTGGTGGGCGAGCGGGGACAAAAGGTGGAAGGTGGAGCGGAAAGCATCCT
TGGTCAGGAGACCACGAAGGCGCGTGCAACATACCACAAGTATATGCACC
CAAAGGAAGTCTTCATTTCGCACGGTATCCTCATTCCGGATATCGTGAAT
ATGAAAGACGAGGCATCTCTTTCACGACGAGGGGGGGGCACCCGCGCTGA
AAAGCCAGGCAGTAGAGGCAATGGATTCCGTCGCAGCAGCAGCCTTGCGG
CGGCGATTTCTTCTTCGCCTGACGACGCTGCGCTGTTATCGGGCGACGGG
GTGAAGGGCTACGGGGGCCTGACGTTCGTGTACCCGTACGGAGCGACGAT
GACCGTCCAATCACCGGCGCATCCCGTGCTCTCGTCCGGGCCGATCTCGT
ATCCCCTGAATAGACCCGTGGCGGGTGTATGGGAATGCCAGGTGGAAGTA
TCTCCTCGAGGGAATACCGATGAAAGCCGTGTCGGTGGTGGTGGGCGAGC
GGGGACAAAAGGTGGAAGGTGGAGCGGAAAGCATCCTTGGTCAGGAGACC
ACGAAGATAAGACAGCCCCGTTCTCAGAACCCTCGTTGCCAAAGACACCA
GGGCGACTGCTTGTCTTGGGCTCGAGTGATATATTTGCCGACTCTTGGCT
TGACAAGATAAGACAGCCCCGTTCTCAGAACCCTCGTTGCCAAAGACACC
AGGGCGACTGCTTGTCTTGGGCTCGAGTGATATATTTGCCGACTCTTGGC
TTGACAAGGAGGAGAACGCGAAGCTTTGTGACGTGTTCATGCGGTGGTTG
CTTGGAGAGGCCGGAGTTCGGCTGCCGTGGCGTAGAGAGTACGAGATTTC
CGAGATTCGGACGGTTCCGAACACGGAATCCCTAGCGGACCGCCTCCGAT
GCTGCTTGCAGGAGGAGAACGCGAAGCTTTGTGACGTGTTCATGCGGTGG
TTGCTTGGAGAGGCCGGAGTTCGGCTGCCGTGGCGTAGAGAGTACGAGAT
TTCCGAGATTCGGACGGTTCCGAACACGGAATCCCTAGCGGACCGCCTCC
GATGCTGCTTGCAGGAATCCGAGGGTCTCCCGAAGAATTTCACAAAGCTC
TTCAATGACTCGCTCTTCGGCTTCGACACTAAAATGATCCCGGAGACGGT
CGAGGCGTATTCTTTTTTGGGGGTGAAGCACGAGCCCCTGACTCTCATAC
CTCCCGAGTTTGAGCGCCCTCTACCCCAGCTGTCGGCCGCAGTTTTCACA
CCCATTTTCAGGGATCCTCCCCCGCCGGCATTGGACAGGTTCGACCTCGA
CGAGCACTTCGCCAGCGACCGCATCCGCCTCGCACAGATCACCAACAAGG
AATCCGAGGGTCTCCCGAAGAATTTCACAAAGCTCTTCAATGACTCGCTC
TTCGGCTTCGACACTAAAATGATCCCGGAGACGGTCGAGGCGTATTCTTT
TTTGGGGGTGAAGCACGAGCCCCTGACTCTCATACCTCCCGAGTTTGAGC
GCCCTCTACCCCAGCTGTCGGCCGCAGTTTTCACACCCATTTTCAGGGAT
CCTCCCCCGCCGGCATTGGACAGGTTCGACCTCGACGAGCACTTCGCCAG
CGACCGCATCCGCCTCGCACAGATCACCAACAAGTGCTCCGCCGGCGATT
TGGATTACTTCGTGCGAGAGTGTGGAGAGATCATGGGTGTTACCACGGAG
CTTTCCCAGAACTCACTGGGACCGACGGGGCCAATGGACATCCTCGATTT
TGTCTTCAAGCGACTCATCAGCTTTAAGATGCTCAACCAGTGCTCCGCCG
GCGATTTGGATTACTTCGTGCGAGAGTGTGGAGAGATCATGGGTGTTACC
ACGGAGCTTTCCCAGAACTCACTGGGACCGACGGGGCCAATGGACATCCT
CGATTTTGTCTTCAAGCGACTCATCAGCTTTAAGATGCTCAACCAGGAGG
GAGCCATAGACGCCCTCCCCGGCGGGAATATGAGCCGGGGTGCATCGTTA
AGACCACTTTCCGGAGCCGACACGCGGAGCTTTCTCGATGGTAGTTCTGG
GAGCGGTGCCAAAGTTAGCGAAACGTCCACGCCATCGGGAGGCTTTGGTG
GTTCACGGGGAATACTGCGGCGACATGATTCTATCGGAAGTGGGAGCGTT
GTTAGTGGTGAGGGAGCCATAGACGCCCTCCCCGGCGGGAATATGAGCCG
GGGTGCATCGTTAAGACCACTTTCCGGAGCCGACACGCGGAGCTTTCTCG
ATGGTAGTTCTGGGAGCGGTGCCAAAGTTAGCGAAACGTCCACGCCATCG
GGAGGCTTTGGTGGTTCACGGGGAATACTGCGGCGACATGATTCTATCGG
AAGTGGGAGCGTTGTTAGTGGT
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