prot_H-elongata_contig197776.5529.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197776.5529.1
Unique Nameprot_H-elongata_contig197776.5529.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM)

HSP 1 Score: 115 bits (289), Expect = 6.650e-30
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:   51 QRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA)

HSP 1 Score: 120 bits (300), Expect = 7.550e-29
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTKTSII--PFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 136
            Q +Y +T+ ERF +  ++ +  PF +  K  SKS    T  ++  M   PYR +VG+ M+ A  TRPD++F   QL++F DNPGP HWRAA++AL+YL  T   G+  GG        LSA+VDADY  CPDTRR VSG
Sbjct:  582 QTRYCETVVERFDMASSNPVHTPFESS-KTLSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSG 719          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA)

HSP 1 Score: 120 bits (300), Expect = 7.980e-29
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTKTSII--PFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 136
            Q +Y +T+ ERF +  ++ +  PF +  K  SKS    T  ++  M   PYR +VG+LM+ A  TRPD++F   QL++F DNP P HWRAA++AL+YL  T   G+  GG        LSA+VDADY  CPDTRR VSG
Sbjct: 1726 QTRYCETVVERFDMASSNPVHTPFESS-KTLSKSQCATTPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSG 1863          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM)

HSP 1 Score: 116 bits (290), Expect = 1.410e-28
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:  191 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 327          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM)

HSP 1 Score: 115 bits (287), Expect = 2.190e-28
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:   51 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM)

HSP 1 Score: 115 bits (287), Expect = 1.230e-27
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:  291 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 427          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4V3X9G3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9G3_9AGAM)

HSP 1 Score: 116 bits (290), Expect = 1.670e-27
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:  672 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 808          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM)

HSP 1 Score: 115 bits (288), Expect = 1.920e-27
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:  268 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDPHAPELFTTFSDADHGGDEDNRRSTSG 404          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 108 bits (271), Expect = 2.830e-27
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0
Query:   34 SPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 136
            SPQTD EVEEM QIPY+E VGAL++ +T TRPDIS+A  Q+AKFN NPG  HW+A ++  +YL  T + G+ +   P G  + +  + DAD+   PD + S SG
Sbjct:    2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDPDDQTSTSG 105          
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM)

HSP 1 Score: 115 bits (287), Expect = 3.650e-27
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 136
            Q QYI  I ERF ++  T++   +  G   SK+ +P+   E+  M  +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T D+ +TY  +P      + + DAD+G   D RRS SG
Sbjct:  357 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 493          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4K4A0_9AGAM6.650e-3043.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0W6P6_9STRA7.550e-2946.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0W780_9STRA7.980e-2946.04Integrase catalytic domain-containing protein n=3 ... [more]
A0A4S4LBP1_9AGAM1.410e-2843.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4L7S0_9AGAM2.190e-2843.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4K791_9AGAM1.230e-2743.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4V3X9G3_9AGAM1.670e-2743.07Integrase catalytic domain-containing protein (Fra... [more]
A0A4S4KQD1_9AGAM1.920e-2743.07DOMON domain-containing protein n=1 Tax=Phellinidi... [more]
UPI001E1BB9B02.830e-2750.00secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A4S4KQ60_9AGAM3.650e-2743.07Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 47..136
NoneNo IPR availablePANTHERPTHR11439:SF282coord: 47..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197776contigH-elongata_contig197776:578..985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197776.5529.1mRNA_H-elongata_contig197776.5529.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197776 578..985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197776.5529.1 ID=prot_H-elongata_contig197776.5529.1|Name=mRNA_H-elongata_contig197776.5529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
QHQYIQTIAERFGVTKTSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYR
EIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTL
DLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like