mRNA_H-elongata_contig197776.5529.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 115 bits (289), Expect = 6.650e-30 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 51 QRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.550e-29 Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTKTSII--PFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 408
Q +Y +T+ ERF + ++ + PF + K SKS T ++ M PYR +VG+ M+ A TRPD++F QL++F DNPGP HWRAA++AL+YL T G+ GG LSA+VDADY CPDTRR VSG
Sbjct: 582 QTRYCETVVERFDMASSNPVHTPFESS-KTLSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSG 719
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.980e-29 Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTKTSII--PFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 408
Q +Y +T+ ERF + ++ + PF + K SKS T ++ M PYR +VG+LM+ A TRPD++F QL++F DNP P HWRAA++AL+YL T G+ GG LSA+VDADY CPDTRR VSG
Sbjct: 1726 QTRYCETVVERFDMASSNPVHTPFESS-KTLSKSQCATTPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSG 1863
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 116 bits (290), Expect = 1.410e-28 Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP+HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 191 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 327
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM) HSP 1 Score: 115 bits (287), Expect = 2.190e-28 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 51 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 187
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM) HSP 1 Score: 115 bits (287), Expect = 1.230e-27 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 291 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 427
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4V3X9G3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9G3_9AGAM) HSP 1 Score: 116 bits (290), Expect = 1.670e-27 Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP+HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 672 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 808
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM) HSP 1 Score: 115 bits (288), Expect = 1.920e-27 Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP+HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 268 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDPHAPELFTTFSDADHGGDEDNRRSTSG 404
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0) HSP 1 Score: 108 bits (271), Expect = 2.830e-27 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 100 SPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTK-LSAWVDADYGTCPDTRRSVSG 408
SPQTD EVEEM QIPY+E VGAL++ +T TRPDIS+A Q+AKFN NPG HW+A ++ +YL T + G+ + P G + + + DAD+ PD + S SG
Sbjct: 2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDPDDQTSTSG 105
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM) HSP 1 Score: 115 bits (287), Expect = 3.650e-27 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 QHQYIQTIAERFGVTK-TSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFASHQLAKFNDNPGPTHWRAAQKALQYLWRTLDLGVTYGGEPKGGTKLSAWVDADYGTCPDTRRSVSG 408
Q QYI I ERF ++ T++ + G SK+ +P+ E+ M +PYR++VGALM+ A TRPDIS+A LA+F+ NPGP HW+AA+ +YL T D+ +TY +P + + DAD+G D RRS SG
Sbjct: 357 QRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSG 493 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197776.5529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig197776.5529.1 >prot_H-elongata_contig197776.5529.1 ID=prot_H-elongata_contig197776.5529.1|Name=mRNA_H-elongata_contig197776.5529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp QHQYIQTIAERFGVTKTSIIPFVAGGKAFSKSDSPQTDAEVEEMHQIPYRback to top mRNA from alignment at H-elongata_contig197776:578..985- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig197776.5529.1 ID=mRNA_H-elongata_contig197776.5529.1|Name=mRNA_H-elongata_contig197776.5529.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=408bp|location=Sequence derived from alignment at H-elongata_contig197776:578..985- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig197776:578..985- >mRNA_H-elongata_contig197776.5529.1 ID=mRNA_H-elongata_contig197776.5529.1|Name=mRNA_H-elongata_contig197776.5529.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig197776:578..985- (Himanthalia elongata Himel1 dioecious)back to top |