mRNA_H-elongata_contig19366.5376.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: D8LNU7_ECTSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU7_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 1.750e-141 Identity = 201/264 (76.14%), Postives = 237/264 (89.77%), Query Frame = 1
Query: 1 FPTVMRTQDVRSGRVLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVELPSNRTGAILMEYCPRGHLLDALNKRGGQRLSENSVLSIMSDVVSAIKYLHDKGLTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPPPR 792
F + +DV +GR LVLKRS+LQS GRVVYE+EAS MR+LAHPN+VQ VTAVEL S++TGAILME+CPRGHLL+ALN GG+R+ E +VLS+M D+VSA+KYLHDKG+THRD+KL+NILRS SG HKLCDFGSCVQGRVPL TAEQRANEEEVVEKTTT+MYRAPE+VDLY+E+ELTEKVD+W+LGC+LYAVCYLKNPFQDAGNLGILNA+IR+P+DS FS+ LV+L+RR LTASPT RPSASEVE+ +HALS+G LPPPR
Sbjct: 34 FAFIHLVEDVNTGRALVLKRSSLQSHEGRVVYEKEASIMRSLAHPNIVQIVTAVELQSSKTGAILMEFCPRGHLLEALNSLGGKRMEEEAVLSVMCDIVSAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTEKVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPR 297
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A6H5K0M2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M2_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 2.510e-137 Identity = 199/264 (75.38%), Postives = 238/264 (90.15%), Query Frame = 1
Query: 1 FPTVMRTQDVRSGRVLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVELPSNRTGAILMEYCPRGHLLDALNKRGGQRLSENSVLSIMSDVVSAIKYLHDKGLTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPPPR 792
F + +DV +GR+LVLKRS+LQS GRV+YE+EAS MR+LAHPN+VQ VTAVEL S++TGAILME+CPRGHLL+ALN GG+ + E +VLS+M D+VSA+KYLHDKG+THRD+KL+NILRS SGSHKLCDFGSCVQGRVPL TAEQRANEEEVVEKTTT+MYRAPE+VDLY+E+ELTE+VD+W+LGC+LYAVCYLKNPFQDAGNLGILNA+IR+P+DS FS+ LV+L+RR LTASPT RPSASEVE+ +HALS+G LPPPR
Sbjct: 33 FAFIHLVEDVNTGRLLVLKRSSLQSHEGRVIYEKEASIMRSLAHPNIVQIVTAVELQSSKTGAILMEFCPRGHLLEALNSLGGKLMEEEAVLSVMCDIVSAVKYLHDKGITHRDVKLENILRSSSGSHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPR 296
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A835ZCB7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB7_9STRA) HSP 1 Score: 210 bits (535), Expect = 7.350e-64 Identity = 112/259 (43.24%), Postives = 159/259 (61.39%), Query Frame = 1
Query: 1 FPTVMRTQDVRSGRVLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVELPSNRTGAILMEYCPRGHLLDALNK--RGGQRLSENSVLSIMSDVVSAIKYLHDKGLTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRG 771
F + +D +G+ L LK+ ++Q+ R + +RE MR+ +HPN++ + A E+ N I+ME CP GHLL + + G+ L E +L I+ DV + YLH G+ HRDIKL+N L + GS +LCDFGS V+G V L +A QRANE EV+E+TTT+ +RAPE+ DL++ +EL VDVW+LGCV Y + YL++PF NL I+NARI P S L+ RML A P R SA++ S + A+ G
Sbjct: 31 FAYIYAAEDTSNGQELCLKKMHVQTPEARALAQREIDLMRSFSHPNLLSALDA-EI-HNSLAYIIMELCPGGHLLARMQRLQAAGKTLPEPEILKILGDVTRGLVYLHGMGIAHRDIKLENCLIAADGSCRLCDFGSAVRGPVSLESAAQRANEAEVIERTTTQQFRAPEMADLFVARELGTAVDVWALGCVAYTLAYLRHPFPSDSNLAIINARIVFPTAPPLSDDFKALVARMLVADPAARASAADALSCIAAMEAG 287
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A812U9J4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U9J4_SYMMI) HSP 1 Score: 215 bits (547), Expect = 3.390e-62 Identity = 105/249 (42.17%), Postives = 152/249 (61.04%), Query Frame = 1
Query: 52 LKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTA--VELPSNRTGAILMEYCPRGHLLDALNKRGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPP 786
LKR +Q + +E + ++ H N+V +++ + + R +L+EYCP GHLL LN R G L + + I ++ A+ LH+ + HRD+KL+NIL S+ G KLCDFGSC+ G VP T E+R+ EE + K TT+MYRAPE+VDLYM ELTE D+W+LGC+LY +C++ +PFQDAGNLGIL+A++ +P DS + L+ RML RPS + + AL+ +PP
Sbjct: 9 LKRCGIQRQENYDIVNKEITLLKRFRHRNIVHLISSEILTVGGKREALLLLEYCPGGHLLQRLNARNGTPLPNSDICRIFGQILQAVLPLHESSPPVIHRDLKLENILHSIGGDVKLCDFGSCMIGYVPTRTPEERSKAEEAISKETTQMYRAPEMVDLYMRDELTESTDIWALGCILYCLCFISHPFQDAGNLGILSAKVTMPHDSAVPPDMKVLIMRMLDMDAEARPSVQYLIQATDALATNNPIPP 257
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A7S1GKX8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKX8_CYCTE) HSP 1 Score: 186 bits (473), Expect = 4.920e-52 Identity = 109/283 (38.52%), Postives = 160/283 (56.54%), Query Frame = 1
Query: 43 VLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQF---------VTAVELPSNRTGA----------------------ILMEYCPRGHLLDALNK--RGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPP 786
V+VLK +++ S R + E+EA + L+HP++++ V L +N G ILMEYC GH LD NK GQR ++++ + +A+ YLH + + HRD+K N L +G++KLCDFGS V G V L T + RA EEV++KTTT+M+RAPE+VDL+M K+LT+ DVW+LGC LY++ +L+N F++ NL IL+ ++PED+ + LVEL+ RMLT R +EV + A+ G LPP
Sbjct: 77 VMVLKVTSIHSRQQRDIAEKEAKLLSRLSHPSIIKMYDSSYRTAPVQQSRLVANIVGVNKDKGDGGAAGQPGKEGRPQHLILMEYCEGGHALDVCNKLSAAGQRFDLSALIIAFGQICNAVSYLHAQRPPIVHRDLKPVNFLVK-NGAYKLCDFGSAVFGHVELKTPKSRAEAEEVIQKTTTQMFRAPEMVDLFMAKKLTQSTDVWALGCCLYSLAFLQNCFEEGSNLAILSRNYKIPEDNPYGEGLVELIDRMLTLDSKARSDMTEVILCLSAIYSGRPLPP 358
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A7S0XCH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCH2_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.180e-51 Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 49 VLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVELPSNRTGA----ILMEYCPRGHLLDALNKRGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGIL 630
VLKR +Q+ + ++E + ++ +V+ A ++ NR+GA +L+EYCP GHLL+ LN R GQ L S+ I ++ AI+ H +THRD+KL+NIL + + ++CDFGSCV G L +E+R EE++ K TT+MYRAPE+VDLY+ + LTEK D+W+LGC+ YA+C+L +PFQDAG+LGIL
Sbjct: 41 VLKRCVIQTNDSLEIVKKEINILQRFEGSYIVKMF-ASDVIVNRSGAREALLLLEYCPGGHLLERLNNRKGQPLPLTSIYRIFGQILLAIQTFHHSNPIITHRDLKLENILFGIDSNVRICDFGSCVSGYTYLRNSEERYAAEEIISKETTQMYRAPEMVDLYLRQVLTEKTDIWALGCIFYALCFLSHPFQDAGSLGIL 239
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A7S3P7A6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7A6_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.800e-51 Identity = 109/276 (39.49%), Postives = 162/276 (58.70%), Query Frame = 1
Query: 22 QDVRSGRV-LVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTA----VELPSNR------------TGAILMEYCPRGHLLDALNK--RGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPP 786
++ +G+V +VLK +++ S R + E+EA + L+HP++++ V PS R ILMEYC GH LD + G+R + ++ + +A+ YLH + + HRD+K N L +G +KLCDFGS V G V L T E RA EEV++KTTT+M+RAPE+VDLYM K+LT+ DVW+LGC LY++ +L+N F++ NL IL+ + ++PED+ + LVEL+ RMLT R +EV + A+ G LPP
Sbjct: 89 KEAAAGKVEMVLKVTSILSRQQRDIAEKEAKLLSRLSHPSIIKMFDTCYRTVAGPSKRGKDDAGKPKERPQHLILMEYCEGGHALDVCSNLAAAGERFDLSQLIIAFGQICNAVSYLHAQRPPIVHRDLKPANFLVKNTG-YKLCDFGSAVFGHVDLRTPEARAEAEEVIQKTTTQMFRAPEMVDLYMAKKLTQATDVWALGCCLYSLAFLQNCFEEGSNLAILSRKYKIPEDNPYGDGLVELLDRMLTVDSKARADMTEVILCLSAVYSGRPLPP 363
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A1E7FEA7_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEA7_9STRA) HSP 1 Score: 176 bits (445), Expect = 9.030e-51 Identity = 99/253 (39.13%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 49 VLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQ-----FVTAVELPSNRTGA-------------ILMEYCPRGHLLDALNKRG--GQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEV 741
VLK +++ S R + E+EA + L+HP++V+ + TA + S + G ILMEYC GH LD NK GQR ++++ + +A+ YLH + + HRD+K N L +G++KLCDFGS V G V L T + R++ E+VV+KTTT+M+RAPE++DL++ K+LT+ DVW+LGC LY++ +L+N F++ NL IL+ + +P+D+ + LVEL+ RML R +EV
Sbjct: 1 VLKVTSIHSRAQRDIAEKEAKLLSRLSHPSIVKMYNACYRTASQQQSGKRGKDQSNTGKERPQHLILMEYCEGGHALDVCNKLASQGQRFDLSTLIIAFGQICNAVSYLHAQRPPIVHRDLKPVNFLVK-NGAYKLCDFGSAVFGHVDLRTPKARSDAEDVVQKTTTQMFRAPEMIDLFVTKKLTQSTDVWALGCCLYSLAFLQNCFEEGSNLAILSRKYTIPDDNPYGDGLVELIDRMLAVDYKARADMTEV 252
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: B7G086_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G086_PHATC) HSP 1 Score: 182 bits (462), Expect = 2.560e-49 Identity = 107/274 (39.05%), Postives = 158/274 (57.66%), Query Frame = 1
Query: 40 RVLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFV-----TAVELPSNRTGA----------------ILMEYCPRGHLLDALNK--RGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPP 786
R +VLK +++ S R + E+EA + L+HP++++ + T + S+ G ILMEYC GH LD N+ G R +++ + +A+ YLH + + HRD+K+ N L G++KLCDFGS V G V L T + R+ EEV+EKTTT+M+RAPE+VDLYM K+LT+ DVW+LG LY++ YL+N F++ NL IL+ ++PE++ + LVEL+ RMLT R +EV + AL G LPP
Sbjct: 99 REMVLKVTSIISRQQREIAEKEAKLLSRLSHPSIIKMIEACYRTVTQSASSGVGRFGKGDSDKAKERPQHMILMEYCEGGHSLDVCNQMVEQGTRYDLGTLIIAFGQICNAVSYLHAQRPPIVHRDLKMANFLVK-DGAYKLCDFGSAVFGHVDLKTPQNRSEAEEVIEKTTTQMFRAPEMVDLYMCKKLTQATDVWALGVCLYSMAYLQNCFEEGSNLAILSNNYKIPEENHYGEGLVELIDRMLTIDSKHRADMTEVILCLSALYSGRPLPP 371
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Match: A0A1Z5JH39_FISSO (AP2-associated kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH39_FISSO) HSP 1 Score: 179 bits (454), Expect = 6.210e-49 Identity = 102/268 (38.06%), Postives = 157/268 (58.58%), Query Frame = 1
Query: 46 LVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVEL--PSNRTGA---------------ILMEYCPRGHLLDALNK--RGGQRLSENSVLSIMSDVVSAIKYLHDKG--LTHRDIKLDNILRSLSGSHKLCDFGSCVQGRVPLVTAEQRANEEEVVEKTTTRMYRAPELVDLYMEKELTEKVDVWSLGCVLYAVCYLKNPFQDAGNLGILNARIRVPEDSKFSASLVELMRRMLTASPTCRPSASEVESSVHALSRGGALPP 786
LVLK +++ S R + E+EA + L+HP++++ V A P+ ++G ILMEYC GH L+ N G R ++++ + +A+ YLH + + HRD+K N L G++KLCDFGS V G V L T + R+ EEV++KTTT+M+RAPE+VDL+M K+LT+ DVW+LGC LY++ +L++ F++ NL IL+ ++PE++ + L EL+ RMLT R +EV + A+ G LPP
Sbjct: 86 LVLKVTSIISRQQRDIAEKEAKLLSRLSHPSIIKMVDACYRTPPTEKSGGFRSKDDGKKERPQHLILMEYCEGGHALNVCNNLMASGMRFDLSTLIIAFGQICNAVSYLHAQRPPIVHRDLKPANFLVK-GGAYKLCDFGSAVFGHVKLDTPQARSEAEEVIQKTTTQMFRAPEMVDLFMAKKLTQATDVWALGCCLYSMAFLQDCFEEGSNLAILSRNFKIPENNPYGDGLTELIDRMLTVDVKARADMTEVILCLSAVYSGRPLPP 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19366.5376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19366.5376.1 >prot_H-elongata_contig19366.5376.1 ID=prot_H-elongata_contig19366.5376.1|Name=mRNA_H-elongata_contig19366.5376.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp MRTQDVRSGRVLVLKRSNLQSLHGRVVYEREASTMRTLAHPNVVQFVTAVback to top mRNA from alignment at H-elongata_contig19366:3761..6922+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19366.5376.1 ID=mRNA_H-elongata_contig19366.5376.1|Name=mRNA_H-elongata_contig19366.5376.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3162bp|location=Sequence derived from alignment at H-elongata_contig19366:3761..6922+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19366:3761..6922+ >mRNA_H-elongata_contig19366.5376.1 ID=mRNA_H-elongata_contig19366.5376.1|Name=mRNA_H-elongata_contig19366.5376.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1560bp|location=Sequence derived from alignment at H-elongata_contig19366:3761..6922+ (Himanthalia elongata Himel1 dioecious)back to top |