mRNA_H-elongata_contig190065.5238.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: D7G3W6_ECTSI (Protein disulfide isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W6_ECTSI) HSP 1 Score: 130 bits (326), Expect = 8.140e-33 Identity = 58/99 (58.59%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 25 AWESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINE 321
++ +V D+DVLV FYAPWCPHC+RL P+Y+++AE+L GR KLV+A MDV++ND+ P V AKKLPT++LFKA SK+ PE + GEH++ LEAF+NE
Sbjct: 686 SFRRIVIDNDNDVLVAFYAPWCPHCRRLGPIYEDMAERLAGREKLVVANMDVAANDLDYPGVSAKKLPTVVLFKAGSKDKPEVYDGEHELEPLEAFVNE 784
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A6I9XZX0_9SAUR (Protein disulfide-isomerase A4 n=21 Tax=Serpentes TaxID=8570 RepID=A0A6I9XZX0_9SAUR) HSP 1 Score: 100 bits (249), Expect = 1.960e-22 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKF-TGEHDVASLEAFINEKA 327
+ES+V + DVL++FYAPWC HCK+L P+Y EL +K ++ ++IAKMD ++ND+ N K + PTI + SK++P KF TGE D+ SL F+ E A
Sbjct: 527 FESIVMDPNSDVLIEFYAPWCGHCKKLEPIYMELGKKYKNQKNVIIAKMDATANDVTNDSYKVEGFPTIYFAPSNSKKNPIKFETGERDLESLSKFVEEHA 627
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: UPI001C4D7B4B (protein disulfide-isomerase A4 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4D7B4B) HSP 1 Score: 99.8 bits (247), Expect = 3.670e-22 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKF-TGEHDVASLEAFINEKA 327
+ES+V DVL++FYAPWC HCK+L P+Y EL +K ++ LVIAKMD ++ND+PN K + PTI + K++P KF +GE D+ +L F+ E A
Sbjct: 532 FESIVMDPKTDVLIEFYAPWCGHCKKLEPIYSELGKKYKNQKNLVIAKMDSTANDVPNDNYKVEGFPTIYFAPSSKKKNPIKFESGERDLENLSKFVEEHA 632
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A6G0X952_9STRA (Protein disulfide-isomerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X952_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.400e-22 Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINEKA 327
+E+ V +D DVL++FYAPWC HCK LAP Y++LAE G +VIAKMD + N+I +P V K PTI F A K +P + G +VA +F+ E A
Sbjct: 382 FETRVMNSDKDVLLEFYAPWCGHCKSLAPKYEQLAESFAGVDSIVIAKMDATENEIDHPKVDVKGFPTIFFFPANDKANPVAYEGAREVAGFTSFLKEHA 481
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A8D2L3R1_VARKO (Protein disulfide-isomerase A4 n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2L3R1_VARKO) HSP 1 Score: 99.0 bits (245), Expect = 6.860e-22 Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKF-TGEHDVASLEAFINE 321
+ES+V + DVL++FYAPWC HCK+L P+Y EL +K ++ LVIAKMD ++ND+P+ K + PTI + K++P KF +GE D+ SL F+ E
Sbjct: 535 FESIVMDPNADVLIEFYAPWCGHCKKLEPIYTELGKKYKNQKNLVIAKMDATANDVPSDKYKTEGFPTIYFAPSNKKKNPIKFESGERDLESLSKFVEE 633
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A6U1MBH6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MBH6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.540e-22 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 61 VLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINEKA 327
+LV+FYAPWC HCK+LAP+YDEL EK G ++IAKMD ++N+I + V K PTI+ F K +P + G D+ F++EKA
Sbjct: 46 ILVEFYAPWCGHCKKLAPIYDELGEKFEGVDSVMIAKMDATANEIDHDGVNVKGFPTIIYFPGSDKSNPVTYQGARDLDGFVEFLSEKA 134
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A6F9DNY6_9ASCI (Protein disulfide-isomerase n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DNY6_9ASCI) HSP 1 Score: 97.8 bits (242), Expect = 1.730e-21 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINEK 324
++ +V D DV+++FYAPWC HCK+L P+Y +L +KL K+ IAKMD ++NDIP+ KA+ PTI A K+ P K+ G ++ LE++I EK
Sbjct: 520 FDEIVLNKDKDVMIEFYAPWCGHCKKLEPIYKKLGKKLKDNNKVTIAKMDATANDIPHSAYKAEGFPTIYWSPAGDKDHPVKYEGGRELKDLESYIAEK 618
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A836CFW1_9STRA (Protein disulfide-isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW1_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.830e-21 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 25 AWESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINEKA 327
++ES+V ++ V V+FYAPWC HCK L P +DE+A+KL G + +VIAKMD ++N++ +P V + PT+L F A K +P + GE +V L F+ E A
Sbjct: 373 SFESIVVNSEASVFVEFYAPWCGHCKALEPKWDEVAQKLEGDKSVVIAKMDATANEVDHPGVDVQGFPTLLFFPAGDKSNPVTYEGEREVDFLLKFVKENA 473
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A7L2K3Y8_CINMU (Protein disulfide-isomerase (Fragment) n=165 Tax=Aves TaxID=8782 RepID=A0A7L2K3Y8_CINMU) HSP 1 Score: 92.0 bits (227), Expect = 2.060e-21 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 28 WESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTG-EHDVASLEAFINEKA 327
++++V +DVL++FYAPWC HCK+L PVY+EL +K + L+IAKMD ++ND+ N K + PTI K +P KF G + D+ L FI E A
Sbjct: 48 FDTIVMDPKNDVLIEFYAPWCGHCKKLEPVYNELGKKYKNEKNLIIAKMDATANDVTNDHYKVEGFPTIYFAPKDKKNNPIKFEGGDRDLEHLSNFIEEHA 148
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Match: A0A482RSS8_9ARCH (Thiol reductase thioredoxin n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSS8_9ARCH) HSP 1 Score: 90.5 bits (223), Expect = 2.140e-21 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 37 LVSRADDDVLVDFYAPWCPHCKRLAPVYDELAE--KLNGRRKLVIAKMDVSSNDIPNPMVKAKKLPTILLFKAQSKESPEKFTGEHDVASLEAFINEKA 327
+V D DVLV+FYAPWC HC++LAP++DEL K NG+ K+V+AKMD ++N++ P + + PTI FK +K SP K++G + AF+ E A
Sbjct: 1 MVVNNDHDVLVEFYAPWCGHCQKLAPIWDELGRTAKQNGQ-KIVVAKMDATANEVDVPGLAVQGFPTIYYFKGDNKASPVKYSGGRTLEDFLAFLEENA 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190065.5238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig190065.5238.1 >prot_H-elongata_contig190065.5238.1 ID=prot_H-elongata_contig190065.5238.1|Name=mRNA_H-elongata_contig190065.5238.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp MAWESLVSRADDDVLVDFYAPWCPHCKRLAPVYDELAEKLNGRRKLVIAKback to top mRNA from alignment at H-elongata_contig190065:417..1119- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig190065.5238.1 ID=mRNA_H-elongata_contig190065.5238.1|Name=mRNA_H-elongata_contig190065.5238.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=703bp|location=Sequence derived from alignment at H-elongata_contig190065:417..1119- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig190065:417..1119- >mRNA_H-elongata_contig190065.5238.1 ID=mRNA_H-elongata_contig190065.5238.1|Name=mRNA_H-elongata_contig190065.5238.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at H-elongata_contig190065:417..1119- (Himanthalia elongata Himel1 dioecious)back to top |