prot_H-elongata_contig106218.507.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106218.507.1
Unique Nameprot_H-elongata_contig106218.507.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: D7FT71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT71_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.690e-23
Identity = 47/55 (85.45%), Postives = 48/55 (87.27%), Query Frame = 0
Query:   36 VPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGGGGG----AQPPASPIFQGQPK 86
            VPTAEDIMKCGIALPNVQSSSDHIMLLCD+QLGG  G    AQPPASPIFQGQ K
Sbjct:    8 VPTAEDIMKCGIALPNVQSSSDHIMLLCDVQLGGATGHSGQAQPPASPIFQGQQK 62          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A7S2PG38_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG38_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.010e-22
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGG 69
            MG EPP+TNYT NFKGVLDY+WFS   +RPL+  P+P  E+++K G  LP+   SSDH+ML+ D+QLGG
Sbjct:  540 MGEEPPHTNYTVNFKGVLDYIWFSVQHLRPLSTVPIPDEEELLKYGEGLPSTMQSSDHVMLIADMQLGG 608          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A6S9ETF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ETF7_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 1.610e-20
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGG 69
             G EPPYTN++G F GVLDY+WF+ P +RPLAV+PVP   ++   G  +PN   SSDH +L CD+QLGG
Sbjct:  558 QGREPPYTNHSGRFTGVLDYIWFARPHLRPLAVSPVPDLAEVEAAGEGMPNCLYSSDHALLCCDVQLGG 626          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A835Z3I4_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.020e-20
Identity = 38/64 (59.38%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    4 EPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQL 67
            EPPYTNYT +F+G LDY+W SAP +RPLAV  VP+ +DI +CG ++PNV +SSDH++L  D+Q+
Sbjct:  583 EPPYTNYTDSFRGTLDYIWCSAPDLRPLAVMQVPSEDDIRRCGPSMPNVAASSDHVLLCADVQV 646          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A6U1PWN2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1PWN2_CYCTE)

HSP 1 Score: 89.4 bits (220), Expect = 5.520e-19
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGGGGGAQPP 76
            +G EP  TNYT NFKGVLDYVW+SA  +RPL+ APVP    +++ G ALP+ + SSDH+MLL D+Q+     A+PP
Sbjct:  323 LGEEPKVTNYTTNFKGVLDYVWYSAQNLRPLSAAPVPDEATLIRHGEALPSTEFSSDHLMLLSDMQIMSS--ARPP 396          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A1Z5J870_FISSO (CCR4-NOT transcription complex subunit 6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J870_FISSO)

HSP 1 Score: 89.4 bits (220), Expect = 9.210e-19
Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGGGG 71
            +G EP  TNYT NFKG LDY+W+SA  +RPL+ APVP  E +   G ALP+ + SSDHIML+ D+Q+ GGG
Sbjct:  558 LGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQIIGGG 628          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A7S0C0T1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0T1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.250e-19
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGGGGGAQPP 76
            +G EP +TNYT NFKG LDY+W+SA  +RPL+ AP+P    +   G ALP+ Q SSDH+ML+ D+Q+G G  ++PP
Sbjct:  587 IGEEPRHTNYTTNFKGTLDYMWYSAQNLRPLSAAPIPEESVLTLHGEALPSTQFSSDHVMLISDMQIGSG--SRPP 660          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A7S1FRM5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRM5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.690e-18
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGG 69
            +  EP +TNYT  FKGVLDY+WFSA  +RPL  AP+P    + K G ALP+ Q SSDHIML+ D+QLGG
Sbjct:  507 LREEPEHTNYTVGFKGVLDYMWFSAQHLRPLTSAPIPDESVLKKHGEALPSTQFSSDHIMLISDMQLGG 575          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A7S2RJ55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ55_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.710e-18
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    2 GSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGG 69
            G EP YTNYT  F+GVLDY+W+S   +RPL V  VPT E I   G ALPNVQ SSDH+++  D+QLGG
Sbjct:  500 GLEPVYTNYTQVFQGVLDYIWYSGQHLRPLGVLEVPTEEAIHSVGQALPNVQYSSDHVLMSVDLQLGG 567          
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Match: A0A7S2Y6H0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6H0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.200e-18
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALPNVQSSSDHIMLLCDIQLGGGG 71
            +G EP  TN+T NFKGVLDY+W+SA  +RPL+ AP+P    + K G ALP+ + SSDHIML+ D+Q+   G
Sbjct:  163 LGDEPWVTNFTLNFKGVLDYIWYSAQNLRPLSAAPIPDEAQLTKHGEALPSTEYSSDHIMLISDLQVVSNG 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106218.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT71_ECTSI1.690e-2385.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2PG38_9STRA2.010e-2259.42Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6S9ETF7_HETAK1.610e-2056.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z3I4_9STRA3.020e-2059.38Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A6U1PWN2_CYCTE5.520e-1955.26Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5J870_FISSO9.210e-1957.75CCR4-NOT transcription complex subunit 6 n=2 Tax=F... [more]
A0A7S0C0T1_9STRA9.250e-1952.63Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1FRM5_9STRA1.690e-1859.42Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2RJ55_9STRA1.710e-1860.29Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2Y6H0_9STRA2.200e-1853.52Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 2..69
e-value: 5.2E-17
score: 63.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 4..66
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106218contigH-elongata_contig106218:143..424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106218.507.1mRNA_H-elongata_contig106218.507.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106218 113..424 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106218.507.1 ID=prot_H-elongata_contig106218.507.1|Name=mRNA_H-elongata_contig106218.507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
MGSEPPYTNYTGNFKGVLDYVWFSAPLIRPLAVAPVPTAEDIMKCGIALP
NVQSSSDHIMLLCDIQLGGGGGAQPPASPIFQGQPKVCNIDRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf