prot_H-elongata_contig99678.17293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99678.17293.1
Unique Nameprot_H-elongata_contig99678.17293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: D7G227_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G227_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 7.360e-42
Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITPPRETKEKLWDESSKQLFAEMKEV 82
            +G+KGI +IAGD++PIDVISHMAYYCEEQG+NYIYVPSKVDLG AAKTKRPTSCV ITPPRETK+ +WD  +K+LFA++KEV
Sbjct:   80 QGRKGICVIAGDISPIDVISHMAYYCEEQGVNYIYVPSKVDLGAAAKTKRPTSCVLITPPRETKDSVWDPVTKELFADLKEV 161          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A0W0DF42_CANGB (Ribonucloprotein n=2 Tax=Candida glabrata TaxID=5478 RepID=A0A0W0DF42_CANGB)

HSP 1 Score: 90.5 bits (223), Expect = 2.290e-21
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITPPRETKEKLWDESSKQLFAEM-KEV 82
            KG+KG+ +IAGD++P DVISH+   CE+ G+ Y++VPSK DLG+A+ TKRPTS +FI P    K+K  +E  K+ + E+ KEV
Sbjct:   63 KGEKGLVVIAGDISPADVISHIPVLCEDHGVPYLFVPSKQDLGSASATKRPTSVIFIVPGSNKKDKSKEEEYKESYNEVVKEV 145          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A836CPU2_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.210e-21
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 KGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITP 59
            KG+ +IAGD++PIDVI+H+  YCEE  + Y+YVPSK DLG AA TKRPTSCV ITP
Sbjct:   71 KGVCVIAGDISPIDVITHLPVYCEENEVRYMYVPSKQDLGAAASTKRPTSCVLITP 126          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: I4Y9J3_WALMC (Ribonucloprotein n=2 Tax=Wallemia mellicola TaxID=1708541 RepID=I4Y9J3_WALMC)

HSP 1 Score: 90.1 bits (222), Expect = 5.740e-21
Identity = 44/88 (50.00%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFIT-----PPRETKEKLWD--ESSKQLFAEMKE 81
            KG+KGI I+AG+++PID+++H+   CEE GI+YIY+PSK +LG A+ TKRPTSC+ IT     P +  ++++ D  E  KQL+AE++E
Sbjct:   73 KGEKGIVILAGNISPIDILTHIPILCEESGISYIYIPSKEELGEASGTKRPTSCMMITQKSSKPKKGQEDEIKDKVEEFKQLYAELQE 160          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A1Y2C7P2_9FUNG (Ribonucloprotein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C7P2_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 6.790e-21
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITPPRETKEKL----WDESSKQLFAEMKEV 82
            KG KGI ++AGD++PIDVI+H+   CEE  + YIY PSK DLG A+ TKRPTSCV +  P   K K     + ES  +L  E+KE+
Sbjct:   84 KGSKGIVVLAGDISPIDVITHLPVLCEENSVPYIYAPSKQDLGAASNTKRPTSCVMVVTPSSLKNKEAAGEYKESFDELNTEVKEL 169          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A024TAU2_9STRA (Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAU2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 8.510e-21
Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITPPRE--TKEKLWDESSKQLFAEMKEV 82
            KG+KG+ +IAGD++PIDVISH+   CE   I+Y++ PSKVDLG +A +KRPTSC+ ITP +     ++ +DE    L AE+K+V
Sbjct:   62 KGEKGLCVIAGDISPIDVISHIPVLCESNDISYVFTPSKVDLGASASSKRPTSCIMITPGKHGFNVQETYDE----LLAEVKKV 141          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A5J4X4M1_9EUKA (Ribonucloprotein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4X4M1_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 9.600e-21
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFIT--PPRETKEKLWDESSKQLFAEMKEV 82
            KGKKGI I+AGDV+PIDVISH+  YCEE  I YI+V SK +LG AA TKRPTSCV     PP +  EK+ ++   Q+ +E+ ++
Sbjct:   95 KGKKGICILAGDVSPIDVISHLPVYCEENNIPYIFVASKAELGLAASTKRPTSCVLAQTLPPDKLPEKI-EKKWNQIVSELAQI 177          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: K3WNU8_GLOUD (Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID=K3WNU8_GLOUD)

HSP 1 Score: 88.6 bits (218), Expect = 1.210e-20
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITPPRETKEKLWDESSKQLFAEMKEV 82
            KG+KG+ IIAGD++PIDVISH+   CEE  I Y++ PSKVDLG +A +KRPTSC+ ITP +     L  ++ ++L  E+K+V
Sbjct:   62 KGEKGVCIIAGDISPIDVISHIPVLCEENDIPYLFTPSKVDLGASALSKRPTSCILITPGKAGFNAL--DAYEELLEEVKQV 141          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: A0A5A8D548_CAFRO (Ribonucloprotein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D548_CAFRO)

HSP 1 Score: 89.0 bits (219), Expect = 1.510e-20
Identity = 36/58 (62.07%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFIT 58
            KG KG+ ++AGD++P+DVISH+  +CEE G+NY++V SK +LG AAKTKRPTSCV +T
Sbjct:   87 KGTKGLCVLAGDISPMDVISHLPVFCEELGVNYVFVTSKAELGEAAKTKRPTSCVLLT 144          
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Match: F0YBI4_AURAN (Ribonucloprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBI4_AURAN)

HSP 1 Score: 87.0 bits (214), Expect = 1.980e-20
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKRPTSCVFITP 59
            KG  G+ IIAGD++PIDVI H+  +CEE+ + YIYVPSK DLG AA TKRPTSCV ++P
Sbjct:   50 KGATGLCIIAGDISPIDVICHLPIFCEEKSVPYIYVPSKQDLGFAALTKRPTSCVMVSP 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99678.17293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G227_ECTSI7.360e-4278.05Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A0W0DF42_CANGB2.290e-2151.81Ribonucloprotein n=2 Tax=Candida glabrata TaxID=54... [more]
A0A836CPU2_9STRA5.210e-2167.86Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
I4Y9J3_WALMC5.740e-2150.00Ribonucloprotein n=2 Tax=Wallemia mellicola TaxID=... [more]
A0A1Y2C7P2_9FUNG6.790e-2151.16Ribonucloprotein n=1 Tax=Rhizoclosmatium globosum ... [more]
A0A024TAU2_9STRA8.510e-2151.19Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 ... [more]
A0A5J4X4M1_9EUKA9.600e-2154.76Ribonucloprotein n=1 Tax=Streblomastix strix TaxID... [more]
K3WNU8_GLOUD1.210e-2052.44Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID... [more]
A0A5A8D548_CAFRO1.510e-2062.07Ribonucloprotein n=2 Tax=Cafeteria roenbergensis T... [more]
F0YBI4_AURAN1.980e-2064.41Ribonucloprotein (Fragment) n=1 Tax=Aureococcus an... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 33..47
score: 45.15
coord: 23..33
score: 29.75
coord: 7..20
score: 40.26
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..82
e-value: 3.3E-24
score: 87.0
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 1..67
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 1..65
e-value: 6.7E-16
score: 57.8
NoneNo IPR availablePANTHERPTHR23105:SF12H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 2coord: 1..75
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99678contigH-elongata_contig99678:953..1371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99678.17293.1mRNA_H-elongata_contig99678.17293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99678 953..1371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99678.17293.1 ID=prot_H-elongata_contig99678.17293.1|Name=mRNA_H-elongata_contig99678.17293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
KGKKGIAIIAGDVTPIDVISHMAYYCEEQGINYIYVPSKVDLGTAAKTKR
PTSCVFITPPRETKEKLWDESSKQLFAEMKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45