prot_H-elongata_contig98.17151.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98.17151.1
Unique Nameprot_H-elongata_contig98.17151.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length192
Homology
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 132 bits (332), Expect = 2.960e-32
Identity = 71/170 (41.76%), Postives = 101/170 (59.41%), Query Frame = 0
Query:    9 VYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE-YQKFP-------GAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNIL 170
            V+E+V RP+D+ ++G+K + K K G DG+VEKYK RLVAQGF QVEG+ Y E ++P   + +I +L A AA  D E+   D + AFL   + EE Y K P        A+ RL KA+YGL Q  R W  K   ++  +GF + +A  CVF K +D    ++ V   DN++
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMV 1195          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 127 bits (319), Expect = 1.570e-30
Identity = 68/182 (37.36%), Postives = 107/182 (58.79%), Query Frame = 0
Query:    4 MVENYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEEYQK---------FPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVV-DGEAEVVVVVHVDNILTHAKD 175
            ++EN  +E V+ PK K VVG+K + K K  ++G V++YK RLVAQG+ Q EGV Y+E +SP      I  L A + AK+ E+   D + AFL+  + E Y +          P  + +L K+IYGL Q+ RCWNN     + + G++Q ++ PC++ K + D    +++ +HVD+IL  + D
Sbjct:  749 LIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDILLFSND 930          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 125 bits (315), Expect = 5.610e-30
Identity = 72/172 (41.86%), Postives = 101/172 (58.72%), Query Frame = 0
Query:   10 YEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE--------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILTHA 173
            Y++V RP+++ VVG K + K K G DG++EKYK RLVA+GF QVE V Y E ++PT   + I  L A AAA D E+   D + AFL   + EE        ++  P  + RL KA+YGL Q  R W  K   +  ++GF++  A   VF K VDG   V+V ++VD++L  A
Sbjct:  981 YDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACPPGFEDRPDIVWRLRKALYGLKQASRQWYKKIRAEFESLGFKRSDADHGVFYKEVDGSL-VIVALYVDDMLIFA 1151          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A5E8C1Z7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1Z7_9ASCO)

HSP 1 Score: 124 bits (312), Expect = 1.410e-29
Identity = 63/175 (36.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    7 NYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE----------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILT 171
            N+VY+ V  P  +  +GTK ++K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + + ++FA +AAK+ E+ + D + AFL   + E+          +   PG + +LNK++YGL Q   CWN K    + A+G++  K  PC+F K+ +G+   ++ ++VD+ILT
Sbjct:  608 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKI-NGKDFSIIGLYVDDILT 781          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A5E8BZM0_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZM0_9ASCO)

HSP 1 Score: 124 bits (312), Expect = 1.410e-29
Identity = 63/175 (36.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    7 NYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE----------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILT 171
            N+VY+ V  P  +  +GTK ++K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + + ++FA +AAK+ E+ + D + AFL   + E+          +   PG + +LNK++YGL Q   CWN K    + A+G++  K  PC+F K+ +G+   ++ ++VD+ILT
Sbjct:  921 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKI-NGKDFSIIGLYVDDILT 1094          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A5E8C1N6_9ASCO (Integrase catalytic domain-containing protein n=3 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1N6_9ASCO)

HSP 1 Score: 124 bits (312), Expect = 1.480e-29
Identity = 63/175 (36.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    7 NYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE----------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILT 171
            N+VY+ V  P  +  +GTK ++K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + + ++FA +AAK+ E+ + D + AFL   + E+          +   PG + +LNK++YGL Q   CWN K    + A+G++  K  PC+F K+ +G+   ++ ++VD+ILT
Sbjct: 1901 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKI-NGKDFSIIGLYVDDILT 2074          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A5E8C8U5_9ASCO (Uncharacterized protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C8U5_9ASCO)

HSP 1 Score: 124 bits (312), Expect = 1.490e-29
Identity = 63/175 (36.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    7 NYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE----------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILT 171
            N+VY+ V  P  +  +GTK ++K+K+  DG ++KYK RLV QGF Q  GV Y + ++P    + + ++FA +AAK+ E+ + D + AFL   + E+          +   PG + +LNK++YGL Q   CWN K    + A+G++  K  PC+F K+ +G+   ++ ++VD+ILT
Sbjct: 2393 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKI-NGKDFSIIGLYVDDILT 2566          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A6H5JRC6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC6_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.290e-29
Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   16 PKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE-YQKFPGAMG-------RLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNILTHAKDKRLWIHSQLSLDKSSN 191
            P+ +  VG+K     K  ++GK+EK+K RLVA+G WQ+  V Y   +SP P + +I ++ A A+ K   L ++D +QA+  A + EE + K P   G       +  +AIYGL  +GR W       +   GFEQ KA PCVFRK+VD    +++V++VD+IL    D+        SL+KS N
Sbjct:  410 PEGRRPVGSKWCFSWKTNKEGKIEKFKARLVARGLWQIPNVDYFHSFSPCPLSVSIKLMLAVASKKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKHSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCE-ELLSSLNKSGN 592          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 121 bits (304), Expect = 1.690e-28
Identity = 73/186 (39.25%), Postives = 107/186 (57.53%), Query Frame = 0
Query:   10 YEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE--------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVF-RKVVDGEAEVVVVVHVDNILTHAKDKRLWIHSQLSL 186
            Y++V RP+++ VV  K + + K G DGK++KYK RLVA+GF QVEGV YT+ ++P    A+I ML A AA  D E+   D + AFL   + EE        +Q+    + RL K++YGL Q  R W  K      ++G+ +  A   VF ++  DG+   VV V+VD++L  AKD+    H +L L
Sbjct:  996 YDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQASREWYKKVRALFESLGYSRSNADHSVFYKRGKDGDL-TVVAVYVDDMLIFAKDRAAVDHIKLEL 1180          
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 119 bits (298), Expect = 9.800e-28
Identity = 68/174 (39.08%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    5 VENYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIPEE--------YQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVFRKVVDGEAEVVVVVHVDNIL 170
            V+  +Y++V RP+D+ VVG K + + K G DG++EKYK R+VA+GF QVEGV YT+ ++P    A+I  L A AA  D E+   D + AFL   + EE        +Q     + +L KA+YGL Q  R W  K   +  ++GF +  A   VF K  DG   ++V V++D++L
Sbjct:  309 VKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNEDGVL-LIVAVYIDDML 481          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98.17151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK2.960e-3241.76Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9HXK4_PARCT1.570e-3037.36Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A4Y9XTU1_9APHY5.610e-3041.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C1Z7_9ASCO1.410e-2936.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8BZM0_9ASCO1.410e-2936.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C1N6_9ASCO1.480e-2936.00Integrase catalytic domain-containing protein n=3 ... [more]
A0A5E8C8U5_9ASCO1.490e-2936.00Uncharacterized protein n=2 Tax=Saprochaete ingens... [more]
A0A6H5JRC6_9PHAE4.290e-2937.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SSE0_PYCCI1.690e-2839.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A1C7MSU6_GRIFR9.800e-2839.08Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..178
e-value: 4.7E-27
score: 95.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 18..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98contigH-elongata_contig98:24477..25052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98.17151.1mRNA_H-elongata_contig98.17151.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98 24103..25067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98.17151.1 ID=prot_H-elongata_contig98.17151.1|Name=mRNA_H-elongata_contig98.17151.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
MCDMVENYVYEQVTRPKDKLVVGTKILVKQKVGQDGKVEKYKCRLVAQGF
WQVEGVHYTEKYSPTPSTAAIWMLFATAAAKDGELRYFDAEQAFLKAGIP
EEYQKFPGAMGRLNKAIYGLVQTGRCWNNKFCGDMAAIGFEQEKAGPCVF
RKVVDGEAEVVVVVHVDNILTHAKDKRLWIHSQLSLDKSSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2