prot_H-elongata_contig97979.17149.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97979.17149.1
Unique Nameprot_H-elongata_contig97979.17149.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig97979.17149.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.230e-17
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0 
Query:    1 QEKSKAALNKVPQRTMVENEHLLREKILGSIGGGPFELLRAFRRMHRGRGTV 52
            Q K KAA  +VP+RTM ENE LLR+KILGSIGGGPF+LLRAFR+MHRGRGTV
Sbjct:  244 QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTV 295
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97979.17149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWU7_ECTSI3.230e-1778.85EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97979contigH-elongata_contig97979:896..1072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97979.17149.1mRNA_H-elongata_contig97979.17149.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97979 896..1072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97979.17149.1 ID=prot_H-elongata_contig97979.17149.1|Name=mRNA_H-elongata_contig97979.17149.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
QEKSKAALNKVPQRTMVENEHLLREKILGSIGGGPFELLRAFRRMHRGRG
TVRRPGYK*
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