prot_H-elongata_contig97207.17089.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97207.17089.1
Unique Nameprot_H-elongata_contig97207.17089.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig97207.17089.1 vs. uniprot
Match: D7FV21_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV21_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 4.790e-28
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:    2 QSWLQEQTALSKFDGYRDSEALSCVKPTAAPAPSSLLLGSVTPPEAGRSVDVVYDPQNSSADWSGFLPRHCTGRRMHPE--PAAHRE 86
            QSWLQEQ + SKFDGYRDS+  S VK TAAPAP++        PEAGR+ DVVYDPQ++SADWSGF PRH  GRRMH    PAAHRE
Sbjct:   40 QSWLQEQASRSKFDGYRDSQQFSNVKVTAAPAPTACSAA----PEAGRNGDVVYDPQDASADWSGFAPRHTAGRRMHHTGLPAAHRE 122
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97207.17089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV21_ECTSI4.790e-2866.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97207contigH-elongata_contig97207:2035..2292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97207.17089.1mRNA_H-elongata_contig97207.17089.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97207 2035..2292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97207.17089.1 ID=prot_H-elongata_contig97207.17089.1|Name=mRNA_H-elongata_contig97207.17089.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
KQSWLQEQTALSKFDGYRDSEALSCVKPTAAPAPSSLLLGSVTPPEAGRS
VDVVYDPQNSSADWSGFLPRHCTGRRMHPEPAAHRE
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