prot_H-elongata_contig9250.16701.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9250.16701.1
Unique Nameprot_H-elongata_contig9250.16701.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
[Close]
BLAST of mRNA_H-elongata_contig9250.16701.1 vs. uniprot
Match: D7G124_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G124_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 2.520e-5
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0 
Query:   12 AYNESTSTFAEPTIYGRLYFSRSIYDGAESDLGVTERNGRARDVKRKDLNYL 63
            A N++TSTFAE TIY RLYF  S+Y GA++ L  +    R+R V  KD+  L
Sbjct:  180 ACNDATSTFAERTIYDRLYFFSSLYKGAQASLETSR--SRSRQVNPKDIKEL 229
[Close]
BLAST of mRNA_H-elongata_contig9250.16701.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 6.620e-5
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0 
Query:   12 AYNESTSTFAEPTIYGRLYFSRSIYDGAESDLGVTERNGRARDVKRKDL 60
            A N++TSTFAE TIY RLYF  S+Y GA++ L  +    R+R V  KD+
Sbjct:  106 ACNDATSTFAERTIYDRLYFFSSLYKGAQASLETSR--SRSRQVNPKDI 152
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9250.16701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G124_ECTSI2.520e-550.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN26_9PHAE6.620e-551.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9250contigH-elongata_contig9250:733..1451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9250.16701.1mRNA_H-elongata_contig9250.16701.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9250 604..1451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9250.16701.1 ID=prot_H-elongata_contig9250.16701.1|Name=mRNA_H-elongata_contig9250.16701.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MVFLGGNTPTQAYNESTSTFAEPTIYGRLYFSRSIYDGAESDLGVTERNG
RARDVKRKDLNYLK
back to top