prot_H-elongata_contig88486.16371.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88486.16371.1
Unique Nameprot_H-elongata_contig88486.16371.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
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BLAST of mRNA_H-elongata_contig88486.16371.1 vs. uniprot
Match: D7FUN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN2_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.310e-48
Identity = 87/118 (73.73%), Postives = 97/118 (82.20%), Query Frame = 0 
Query:    1 MTYTALAAETEVIDSLREVLDGLQGNIRKSLLDMESELIQQSAPPAQYSALQGAASYINHAARSVVTFAINGFNGASEVFDASFEALAEPSRRTLVKSSELFPWHVWYDAWNNLTKGE 118
            MTY ALAAETEVI++LREVLDGLQ NIRKSL DME+EL +Q  PP   S LQGAASY N+ ARS V  AI+GFN AS VFDASFEALAEPSRRTL++S+ELFPW  WY AW N+TKGE
Sbjct:    1 MTYAALAAETEVIENLREVLDGLQSNIRKSLEDMETEL-RQPPPP---SVLQGAASYANNVARSAVAVAIDGFNNASRVFDASFEALAEPSRRTLLRSTELFPWQSWYQAWTNITKGE 114
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BLAST of mRNA_H-elongata_contig88486.16371.1 vs. uniprot
Match: A0A6H5KN12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.110e-42
Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0 
Query:    1 MTYTALAAETEVIDSLREVLDGLQGNIRKSLLDMESELIQQSAPPAQYSALQGAASYINHAARSVVTFAINGFNGASEVFDASFEALAEPSRRTLVKSSELFPWHVWYDAWNNLTKGE 118
            MTYTALAAETEVI++LREVL GLQ NIR+SL DME+EL +Q  PP   S LQGAASY N+ AR  V  AI+GFN AS VFDASFEALAEPSRRTL++S+ELFPW  W+ AW N+TKGE
Sbjct:  631 MTYTALAAETEVIENLREVLAGLQSNIRRSLEDMETEL-RQPPPP---SVLQGAASYANNVARLAVAVAIDGFNNASRVFDASFEALAEPSRRTLLRSTELFPWQTWHQAWTNITKGE 744
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88486.16371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUN2_ECTSI1.310e-4873.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN12_9PHAE1.110e-4271.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88486contigH-elongata_contig88486:19..1594 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88486.16371.1mRNA_H-elongata_contig88486.16371.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88486 19..1594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88486.16371.1 ID=prot_H-elongata_contig88486.16371.1|Name=mRNA_H-elongata_contig88486.16371.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MTYTALAAETEVIDSLREVLDGLQGNIRKSLLDMESELIQQSAPPAQYSA
LQGAASYINHAARSVVTFAINGFNGASEVFDASFEALAEPSRRTLVKSSE
LFPWHVWYDAWNNLTKGE
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