prot_H-elongata_contig88333.16361.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A438CFA8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CFA8_VITVI) HSP 1 Score: 157 bits (396), Expect = 3.660e-40 Identity = 97/252 (38.49%), Postives = 138/252 (54.76%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLCAMK---------------RDEEQAVRD---LCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGV--TKTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
GVW +VE P G +G + VFK K D GKIE+YK LV +G+ Q +GI ++E+ SP + S R++ +I+A E Q+DV A+L D++EE+Y+E P + + K+ V L K++YGL A C D + + L + F +KDLGEASY LG I RDR G L Q YI+ + +RF + K++ P V G K SK+ PQ D + EEM+ IPY +VG+LM
Sbjct: 846 GVWDLVELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYMEQPIGFVEVGKEDLVCKLNKSIYGLKQASRQCGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKSTKAPIVKGDK-FSKAQCPQNDDEREEMKTIPYSSVVGSLM 1096
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A438EN28_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN28_VITVI) HSP 1 Score: 150 bits (378), Expect = 3.740e-38 Identity = 95/251 (37.85%), Postives = 134/251 (53.39%), Query Frame = 0
Query: 9 VWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAY--RDSRKQVGLLKKAMYGLVHAGLLCAMK--------RDEEQAVRD----------LCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTS--ILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
VW +VE P G +G + VFK K D G IE+YK LVA+GF Q +GI Y E+ SP + S+R++ +++A E +Q+DV A+L ++EEE+Y++ PE + D + V LKK++YGL A C K D A D L F +KD+GEASY +G I RDR G L Q YI + ERF + S + P V G + + P+ D + E+M+ IPY VG+LM
Sbjct: 269 VWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDR-FNLDQCPKNDLEREQMKNIPYASAVGSLM 518
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A7N2MRX3_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MRX3_QUELO) HSP 1 Score: 149 bits (377), Expect = 1.220e-37 Identity = 93/245 (37.96%), Postives = 138/245 (56.33%), Query Frame = 0
Query: 1 MDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELP---EAYRDSRKQVGLLKKAMYGL-VHAGLLCAMKRDEEQAV---RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSILPS-VAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
MD VW++V+ P G+ +G + V K K DG I+KYK LVA+G+ Q +GI YEE+ SP SIR++ +I+A L E Q+DV A+L +++EEIY++ P E RK L +K++ L ++ G + D E V R L S F +KD+GEA+Y LG I RDR+ L Q YI+T+ ERF + + + + + G LS D P+++ EM ++PY VG+LM
Sbjct: 695 MDSMAKNQVWELVDLPPGRKTIGNKWVLKIKRKADGSIDKYKARLVAKGYTQREGIDYEETFSPVVRFVSIRLILAIVAHLDLELFQMDVKTAFLNGELDEEIYMDQPIGFEVKEQGRKVCRLKRKSLLILSLYVGDILLAGNDMEMIVTTKRWLSSIFEMKDMGEANYVLGVKIFRDRSKKLLGLFQETYIKTILERFRMHNSKPIDTPIEKGHTLSLEDCPKSEKGKREMARVPYASAVGSLM 939
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 144 bits (363), Expect = 3.980e-36 Identity = 91/279 (32.62%), Postives = 136/279 (48.75%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAG------------------------------------LLCAMKRDEEQAV----------RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKT-SILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
G + +VE PK ++G++ VF+ K + + +IE YK LVAQGF QV GI + E+ +P ASI ++ ++ A WE Q+DV AYL D+EEEIY++ P + K+ V LK+ +YGL +G LL A+ D+ R++ + F++ DLGE + LG + RDR+ TL QH YI + RF + S+ + G LS P T E+M+ IPYRE++G+LM
Sbjct: 142 GTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLM 420
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A438CCC3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CCC3_VITVI) HSP 1 Score: 144 bits (364), Expect = 6.520e-36 Identity = 94/246 (38.21%), Postives = 136/246 (55.28%), Query Frame = 0
Query: 12 VVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAG---------------LLCAMKRDEEQAVRDLCSC-FRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGV--TKTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
+VE P G +G + VFK K D GKIE+YK LV +G+ Q +GI ++E+ SP + S R++ +I+A Q+DV +A+L +++EE+Y+E P + + K+ V L K++YGL A LL + D + + S F +KDLGEASY LG I RDR G L Q YI+ + +RF + K++ P V G K SK+ PQ D + EEMR IPY +VG+LM
Sbjct: 532 LVELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLALHQMDVKIAFLNGNLDEEVYMEQPTGFVEVGKEDLVCKLNKSIYGLKQASSGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKSTKEPIVKGDK-FSKAQCPQNDDEKEEMRIIPYSSVVGSLM 776
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A5N5FRN8_9ROSA (Retrotransposon protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5FRN8_9ROSA) HSP 1 Score: 142 bits (359), Expect = 3.010e-35 Identity = 89/239 (37.24%), Postives = 131/239 (54.81%), Query Frame = 0
Query: 9 VWQVVERPKGKT-VLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLCAMKRDEEQAV-----RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSI--LPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
VW +V +P G T ++G + VFK K D G ++K+K LV +GF Q +GI Y E+ SP + S+R++ +I A E Q+DV MA+L D+EE+IY++ + + K+ V L K++YGL A K D+ A + C +KDLGEA + LG I RDR +L Q QYI + +RF + K S LP + G LS P+ + + E M+ PY +VG+LM
Sbjct: 480 VWSLVPQPPGITKIIGCKWVFKTKRDSQGNLDKHKARLVTKGFTQREGIDYNETFSPVSTKDSMRIILAITAHFDLELHQMDVKMAFLNGDLEEDIYMQQAPGFVERGKEAMVCKLNKSIYGLKQASRQWNKKFDQVMAASGFQENKMDECIYLKDLGEARFVLGIEIIRDRAKKSLGLSQRQYIDRVTKRFNMDKCSNGELP-IGKGDKLSSDQCPKNELENEGMKDKPYASLVGSLM 717
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A5ADW6_VITVI (RNA-directed DNA polymerase n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5ADW6_VITVI) HSP 1 Score: 140 bits (353), Expect = 2.230e-34 Identity = 89/247 (36.03%), Postives = 130/247 (52.63%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLCAM----------KRDEEQAVRD---LCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSI--LPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
GVW +VE P G + + VFK K D G+IE+YK L+ +G+ Q +GI ++E+ SP + S R++ +I+A E Q+DV A+L D++E++Y+E P + + K+ V L K MY V+ + D + L + F +KDLGE SY LG I RDR G L Q YI+ + +RF + S +P V G + SK+ PQ D + EE R IPY +VG LM
Sbjct: 2050 GVWDLVELPHGCKPIACKWVFKTKCDYSGQIERYKARLMVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEDVYMEQPIGFVEVGKEDLVCKLNKCMYLRVNGSSYIFLVLYVDDILLESNDSNLLIETKHMLSTHFDMKDLGETSYVLGIKILRDRANGVLKLSQRTYIEKILKRFNMHNCSFARVPIVKGDR-FSKAQCPQNDDEREEKRTIPYSSLVGNLM 2295
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 138 bits (347), Expect = 5.610e-34 Identity = 91/269 (33.83%), Postives = 135/269 (50.19%), Query Frame = 0
Query: 1 MDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQVGL-LKKAMYGLVHAGLL---------------------------CAMKRDE--EQAVRDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVT--KTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
M G W +VE P G+ +G++ V++ K DG IE++K LVA+GF Q G Y E+ + T Q ++R V ++ A R +D+ A++ +D++ EIY+ PE +R ++ L K++YGL A L A K ++ ++ V L F+++DLG SY LG ITR+R L Q QYI E FG+T K + P + LSKS SPQT +VEEM +IPY VG+L+
Sbjct: 127 MTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIYIYQNDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTP-MTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLL 394
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 137 bits (344), Expect = 3.330e-33 Identity = 88/277 (31.77%), Postives = 139/277 (50.18%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQVGLLKKAMYGL----------VHA---------------------------------GLLCAMKRDEE--QAVRDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGV--TKTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
G W +V R G +G R VF +K ++ G++ +YK LVA+GF+Q G+ + E+ SP SIR+V S++ A + QLD D A+L +D++E++++E+P ++ + L KA+YGL +HA ++ A K ++E + L S F++K+LGE + LG I DR TLM Q +YI + RF K + P +G K L+K SP T+A+ E+MR PYR ++G L+
Sbjct: 867 GSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYVYVCLYVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLL 1142
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A2N9F7V6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F7V6_FAGSY) HSP 1 Score: 136 bits (342), Expect = 6.020e-33 Identity = 86/234 (36.75%), Postives = 129/234 (55.13%), Query Frame = 0
Query: 9 VWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELP---EAYRD-SRKQVGLLKKAMYGLVHAGLLCAMKRDEEQAVRDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSILPS-VAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM 237
VW++V+ P G+ +G + V K K DG I++YK LVA+G+ Q +GI YE++ SP ASIR++ SI+A E Q+DV A+L +++EEIY+ P EA RD S K V +M H G + L S F +KD+GEA++ LG ITRDR+ L Q YI+ + ERF + + + + + G LS P+ D + +M ++PY +G+LM
Sbjct: 715 VWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEALRDMSAKCVVSNVPSMVSNSHLGNAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLM 948 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88333.16361.1 ID=prot_H-elongata_contig88333.16361.1|Name=mRNA_H-elongata_contig88333.16361.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bpback to top |