prot_H-elongata_contig88096.16335.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88096.16335.1
Unique Nameprot_H-elongata_contig88096.16335.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.040e-73
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKV 124
            L  + +A+DGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK+VLAIACTKTDMESKRVVSRARAE F +EVGGI+CETSAKENWGV+ELF +V
Sbjct:   50 LTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARV 171          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 7.440e-61
Identity = 90/123 (73.17%), Postives = 104/123 (84.55%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKVT 125
            L  +     G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGK+VLAIAC KTD+ES RVVSRARAEQ+++ +  I CETSAKENWGV+E+F KV+
Sbjct:   50 LTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVS 172          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 187 bits (474), Expect = 1.590e-57
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 0
Query:    9 ASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELF 121
            A+DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG++VLAIA TKTD+E++R VSR RAEQ+   +G + CETSAKENWGV+E+F
Sbjct:   57 AADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVF 169          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.480e-50
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKVT 125
            L  +    DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MKDWV+ELR N  +  ++LAIAC K D+ S RVVSR RAE F S +  IL +TSAKEN GV+ELF KVT
Sbjct:   45 LTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVT 167          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.460e-49
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 0
Query:   11 DGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAI--ACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELF 121
            +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+  LAI  A  KTD+E +RVVSRARAE+F + +G  + ETSA+ENWGV+ LF
Sbjct:   46 NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLF 158          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.080e-47
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKVT 125
            L  +   S+G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  +V+AIAC K D+++++V SRARAE F   +  I+ +TSAKEN+GVSELFT V+
Sbjct:   53 LTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVS 174          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 159 bits (401), Expect = 1.240e-46
Identity = 74/123 (60.16%), Postives = 96/123 (78.05%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKVT 125
            L  +   + G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  +V+AIAC K D+++++V SRARAEQF   +  I+ +TSAKEN+GV+ELF  V+
Sbjct:   48 LTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVS 169          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 9.710e-40
Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 0
Query:    3 LVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVG-GILCETSAKENWGVSELFTKV 124
            L  +   + G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +FQ M+ WVEELR NV + K+V+AIA TK+D++  R  +R +AE+F S +   ++ ETSAK + GV ELF  V
Sbjct:   53 LTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATV 175          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A0M0LQE4_9EUKA (Gtp-binding protein rab11 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQE4_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 4.300e-37
Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 0
Query:   17 MQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKV 124
            +QIWDTAGQERFR+MAPLYYR A  A++ F I DE SF+K+K+WV EL++NV E  +VLAIAC K D+  +R+VS   A+Q+ S +G ++ ETSAK N GVS+LF +V
Sbjct:   64 LQIWDTAGQERFRSMAPLYYRGAVAAILVFSITDEASFEKLKEWVRELQSNVDEP-LVLAIACNKADLADQRIVSMETAQQYASSIGALIYETSAKSNTGVSQLFNEV 170          
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Match: A0A8J5XZ05_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ05_DIALT)

HSP 1 Score: 130 bits (326), Expect = 1.410e-35
Identity = 64/115 (55.65%), Postives = 83/115 (72.17%), Query Frame = 0
Query:   11 DGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTSEVGGILCETSAKENWGVSELFTKVT 125
            +G    +QIWDTAGQERFR+MAPLYYR A  A++ FDI ++ SF KMK+WV EL+ NV E  +VLAIAC K D+  +RVV   +A Q+ +++G I+ ETSAKEN GV  LF  V+
Sbjct:   51 NGQKITLQIWDTAGQERFRSMAPLYYRGAVAAILVFDITNDVSFDKMKEWVRELQANVEEP-LVLAIACNKADLREQRVVQFEQAAQYAAKIGAIIVETSAKENVGVDALFMDVS 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88096.16335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI8.040e-7388.52Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA7.440e-6173.17Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK1.590e-5774.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BGJ2_9STRA5.480e-5065.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZBF8_9STRA3.460e-4968.14P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3NK22_9STRA1.080e-4761.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0XY01_AURAN1.240e-4660.16Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZPM5_9STRA9.710e-4056.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0M0LQE4_9EUKA4.300e-3758.33Gtp-binding protein rab11 n=1 Tax=Chrysochromulina... [more]
A0A8J5XZ05_DIALT1.410e-3555.65Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 71..84
score: 20.69
coord: 106..127
score: 31.15
coord: 8..30
score: 49.24
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 3..126
e-value: 1.6E-5
score: -46.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..124
e-value: 2.5E-5
score: -32.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..125
e-value: 5.6E-20
score: 82.4
NoneNo IPR availableGENE3D3.40.50.300coord: 3..126
e-value: 1.0E-37
score: 131.2
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 9..125
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 9..125
NoneNo IPR availablePROSITEPS51419RABcoord: 1..127
score: 19.391
IPR001806Small GTPasePFAMPF00071Rascoord: 7..124
e-value: 2.9E-34
score: 118.0
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..124
e-value: 4.9E-15
score: 53.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88096contigH-elongata_contig88096:1183..2179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88096.16335.1mRNA_H-elongata_contig88096.16335.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88096 1183..2179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88096.16335.1 ID=prot_H-elongata_contig88096.16335.1|Name=mRNA_H-elongata_contig88096.16335.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
ARLVSRRSASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMD
EESFQKMKDWVEELRTNVPEGKIVLAIACTKTDMESKRVVSRARAEQFTS
EVGGILCETSAKENWGVSELFTKVTGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase