prot_H-elongata_contig86980.16245.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86980.16245.1
Unique Nameprot_H-elongata_contig86980.16245.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.500e-30
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   15 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 79
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 6.420e-30
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 77
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.420e-29
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 77
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.460e-29
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   79 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 143
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.850e-29
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   10 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNL 74
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.780e-28
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:  186 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 250
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.160e-28
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 77
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.980e-27
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:  360 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 424
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.290e-27
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:   77 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 141
[Close]
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.810e-27
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:    3 RTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMLFDRLSRL 67
            RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLTFVCLSRAK+L DL+VEPM FDR+  L
Sbjct:  356 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 420
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86980.16245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSF1_9PHAE2.500e-3083.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFN2_9PHAE6.420e-3083.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE1.420e-2983.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE1.460e-2983.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE2.850e-2983.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS2_9PHAE1.780e-2883.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE2.160e-2883.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JFG8_9PHAE1.980e-2783.08Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE2.290e-2783.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8Y8_9PHAE3.810e-2783.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..54
e-value: 4.6E-6
score: 28.9
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 1..56
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 1..56
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86980contigH-elongata_contig86980:660..860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86980.16245.1mRNA_H-elongata_contig86980.16245.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86980 660..860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86980.16245.1 ID=prot_H-elongata_contig86980.16245.1|Name=mRNA_H-elongata_contig86980.16245.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MTRTQLPLKLYWAITMHKSQGQTLSKAVIDLGEKEACTGLTFVCLSRAKK
LTDLLVEPMLFDRLSRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase