prot_H-elongata_contig8648.16212.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8648.16212.1
Unique Nameprot_H-elongata_contig8648.16212.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length873
Homology
BLAST of mRNA_H-elongata_contig8648.16212.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 1.040e-125
Identity = 371/619 (59.94%), Postives = 406/619 (65.59%), Query Frame = 0
Query:  102 KEGRPMWCPXXXXXXXXXXXXXXXXXXXXXXXXXXXYDKDRIRRRCRLHKLGDMVXXXXXXXXXXXXXXXXXXGFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRGPMDREPGDMADDPLMPMPAGKSAPCNRACRFAYPGEEAIYCAKHKMNGMVDVVNPSCKMQDCPEEPTHXXXXXXXXXXXXXXXVGMKSIPVLRPAGLHWSAELRRQATQTARERSKLEADMETGSARCTPLPPKASTLEEKRLRQQEAAMAAIEAAAASVRGPEAHAANIALNSREMLSASTAPIVPPFVHEQELGPS---SITSAELALAFSGLNDDDMGGAAASPSAEP------------------PSLPGIGTDDLSRSPLPVA--PESGPAKKRRRAAEVNAVTTFSQAPSPNTYASAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTL----------MAMGTVPI--VSSAPMXXXXXXXXXXXXVSLPGGAGVS------DALLASPTTPTDQQAMAAAAAVAVASGIPPVVMTGAPVVPPVGSKCAVADCVAPATFGHPGPGHVPTHCLTHCEEGMHRLAADEAR-SPL 678
            KEGRPMWCP XXXXXXXXXXXXXXXXXXXXXXXXX YD+DRIRRRCRLHKL DMVXXXXXXXXXXXXXXXXX GFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRG        +ADDP+MP+PAGK+ PCNRACR+AYPGEEA+YC KHK+NGMVDV+NPSC           XXXXXXXXXXXXXXX  MK I   +P GLHWSAELRRQAT  ARER+K+EA+ME GSARCTPLPPKA T EEKR+R                RGPEA AAN+ALNSREMLSAST PIVPPF   +E+      SITSAELALAFSGL +DDM  AAA+                       P+LPGIGT+ L R+  P A  P+SGPAKKRRR ++ +A  T          +SAA XXXXXXXXXXXX                                   XXXXXXXXXXXXXXX             +A G VP+  VS+A  XXXXXXXXXXXX                +A+L+SP                        VM GA VVP +GSKCAVADC APATFGHPGPGHVPTHCLTHCEEGMHRLAAD  R +PL
Sbjct:  209 KEGRPMWCPDXXXXXXXXXXXXXXXXXXXXXXXXXGYDRDRIRRRCRLHKLDDMVXXXXXXXXXXXXXXXXXCGFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRGVAGL---GIADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKPIAAQKPTGLHWSAELRRQATANARERNKMEAEMEAGSARCTPLPPKAGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXPPLPALPGIGTEHLGRAVAPAAGTPDSGPAKKRRRGSDGSATPTSGPGVDAYEASSAAXXXXXXXXXXXXXSTVQYADHAAYHAALSSEMMAGLMPSMMQTIGELPXXXXXXXXXXXXXXXXXXXXXXLSSAEALAHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEA---------------------FVMAGA-VVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPL 802          
BLAST of mRNA_H-elongata_contig8648.16212.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 5.200e-104
Identity = 382/865 (44.16%), Postives = 432/865 (49.94%), Query Frame = 0
Query:  102 KEGRPMWCPXXXXXXXXXXXXXXXXXXXXXXXXXXXYDK--------------DRIRRRCRLHKLGDMVXXXXXXXXXXXXXXXXXXGFPGLKPRFCSEHKQDGMLNLK-------------------------------------------------------------------TRAFRCKYRGPMDREPGDMADDPLMPMPAGKSAPCNRACRFAYPGEEAIYCAKHKMNGMVDVVNPSCKMQDCPEEPTHXXXXXXXXXXXXXXXVGMKSIPVLRPAGLHWSAELRRQATQTARERSKLEADMETGSARCTPLPPKASTLEEKRLRQQEAAMAAIEAAAASVRGPEAHAANIALNSREMLSASTAPIVPPFVHEQELGPS---SITSAELALAFSGLNDDDMGGAAASP---------------------SAEPPSLPGIGTDDLSRSP-LPVAP-------ESGPAKKRRRAAEVNAVTTFSQAPSPNTYASAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHT-----------------LMAMGTVPIVSSAPMXXXXXXXXXXXXVSLPGGAGVS------DALLASPTTPTDQQAMAAAAAVAVASGIPPVVMTGAPVVPPVGSKCAVADCVAPATFGHPGPGHVPTHCLTHCEEGMHRLAADEAR-SPLGGRVAGKGKRKADDSNILTPPVQAHLAPVSTASLAAAPAVQAVPPPPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPTPESNHVAITTLKVEKPEELGRGKRIKKRTAVAHEGMMLLAGAVASHS 829
            KEGRPMWCP                                            DRIRRRCRLHKL DMV                  GFPGLKPRFCSEHKQDGMLNLK                                                                   TRAFRCKYRG        +ADDP+MP+PAGK+ PCNRACR+AYPGEEA+YC KHK+NGMVDV+NPSCK                         VGMK I   +P GLHW+AELRRQAT  ARER+K+EA+ME GSARCTPLPPKA T EEKR+R                RGPEA AAN+ALNSREMLSAST PIVPPF   +E+      SITSAELALAFSGL +DDM  AAA+                      S   P+LPGIGT+ L R+  LP          +SGPAKKRRR ++ +A  T    P  + Y +++    XXXXXXXXXXXXXXXX                                 XXXXXXXXXX                   +     VP+VS+A  XXXXXXXXXXXX                +A+L+SP                        VM GA VVP +GSKCAVADC APATFGHPGPGHVPTHCLTHCEEGMHRLAAD  R +PL                ++ PP         T+S+ AA  V+A      A+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            PP P         +KV   EE G+ K+ KK+   A EG+MLLAGAVASH+
Sbjct:  209 KEGRPMWCPDHRPPGSFDVKTSRCQEPSCLKHPRHDTRSTKAHRQIVSARVQWDRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYRRCLNTTTPPSPVFAIGVGFSSLAWQRRCKTSPPLGVCHRGIGFSSPANDVVKQANSLRELGNQTRAFRCKYRGVAGL---GIADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSCKAH---------------------MAVGMKPIAAQKPTGLHWNAELRRQATANARERNKMEAEMEAGSARCTPLPPKAGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEMAAPPGMSITSAELALAFSGLPEDDMHSAAAAXXXXXXXXXXXXXXXXXXXXXFSPPLPALPGIGTEHLGRAAALPXXXXXXXXXXDSGPAKKRRRGSDGSATPT--SGPGVDAYEASSVAAAXXXXXXXXXXXXXXXXVQFADQAAYHAALSSEMMAGLMPSMMQPIGELPXXXXXXXXXXXXXXXXXXXXXXLSSADALVHGFVPVPMVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMLSSPEA---------------------FVMAGA-VVPAIGSKCAVADCAAPATFGHPGPGHVPTHCLTHCEEGMHRLAADADRVAPLP---------------LVAPPEN------GTSSVPAAGPVEA------AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLEAAATAEPPPVP---------MKV---EETGKVKKNKKKAPAAGEGIMLLAGAVASHT 986          
BLAST of mRNA_H-elongata_contig8648.16212.1 vs. uniprot
Match: D7FQ52_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 6.050e-33
Identity = 105/221 (47.51%), Postives = 124/221 (56.11%), Query Frame = 0
Query:  138 YDKDRIRRRCRLHKLGDMVXXXXXXXXXXXXXXXXXXGFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRGPMDREPGDMADDPLMPMPA-------GKSAP-----------CNRACRFAYPGEEAIYCAKHKMNGMVDVVNPSCKMQDCPEEPTHXXXXXXXXXXXXXXXVGMKSIPVLRPAGLHWSAELRRQATQTARERSKLEADMETGSARCTPLPPK 340
            +  DR+RRRCRL       XXXXXXXXXXXXXXXX  G  G K RFCSEHKQ+GM+NLKTRAFRCK+RG  + +P                    GK AP           CNRACRFAYP E A+YCA H + GMVDV+NP C M DC E PT+                GM+ I       LHWS+E RRQA  +A E  ++    + GSA+ + LPPK
Sbjct:  246 FKTDRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKQEGMVNLKTRAFRCKHRG--EPKPXXXXXXXXXXXXXXXXXTRNGKGAPPNKKKSRRAVTCNRACRFAYPNEMAVYCAVHALEGMVDVLNPQCSMDDCLEIPTYGFAGEQPTFCMVHSGPGMQVIMPQSTNVLHWSSEARRQAAASALEAKRIAGLRQAGSAKVSTLPPK 464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8648.16212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMP7_ECTSI1.040e-12559.94EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KYH5_9PHAE5.200e-10444.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ52_ECTSI6.050e-3347.51EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8648contigH-elongata_contig8648:648..9191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8648.16212.1mRNA_H-elongata_contig8648.16212.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8648 21..9276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8648.16212.1 ID=prot_H-elongata_contig8648.16212.1|Name=mRNA_H-elongata_contig8648.16212.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=873bp
MVNLIGRRCAVDNCETYASYGNTGEKARYCAKHKGTDMVNLTVKHCEFQG
CVTQPSFNYAGQRKASRFCARHRLEHMVDVLDRHCAQHGCDRQPIYGQAG
EKEGRPMWCPDHRPPGSFDVKTSRCQEPGCLKHPSYGYDKDRIRRRCRLH
KLGDMVDVKSPRCEMIGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKTRAF
RCKYRGPMDREPGDMADDPLMPMPAGKSAPCNRACRFAYPGEEAIYCAKH
KMNGMVDVVNPSCKMQDCPEEPTHGYDGESATFCEAHMAVGMKSIPVLRP
AGLHWSAELRRQATQTARERSKLEADMETGSARCTPLPPKASTLEEKRLR
QQEAAMAAIEAAAASVRGPEAHAANIALNSREMLSASTAPIVPPFVHEQE
LGPSSITSAELALAFSGLNDDDMGGAAASPSAEPPSLPGIGTDDLSRSPL
PVAPESGPAKKRRRAAEVNAVTTFSQAPSPNTYASAAEAAAAAAAAAFHA
SYSSDLMASMAAAGAGGLSQSSPATSGMMEGLASMAGMMPMHQQQQQQQQ
HTLMAMGTVPIVSSAPMAMDTTPFTMSSPVSLPGGAGVSDALLASPTTPT
DQQAMAAAAAVAVASGIPPVVMTGAPVVPPVGSKCAVADCVAPATFGHPG
PGHVPTHCLTHCEEGMHRLAADEARSPLGGRVAGKGKRKADDSNILTPPV
QAHLAPVSTASLAAAPAVQAVPPPPAASPAAFPASMSASAPMNAQAPAED
AFTSALAAAAPAAPPVAPPSPAPAPAPVAPPTPESNHVAITTLKVEKPEE
LGRGKRIKKRTAVAHEGMMLLAGAVASHSNNAEENGDIEDDEETDPEDIG
GVPTAVAAAAAVVGSPAPTVPV*
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