prot_H-elongata_contig8637.16203.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A6H5J6Y2_9PHAE (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Y2_9PHAE) HSP 1 Score: 173 bits (439), Expect = 3.800e-52 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 0
Query: 81 LSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
L+ ILCCLCGR IQPNGANMCGACL+DQVDVTEGIPKKGL IIQCRRCLKWLTKND+W+ FELESA FLA++LKKIPG+ KQ++VDAKW+WT
Sbjct: 61 LATILCCLCGRPIQPNGANMCGACLQDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 152
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI) HSP 1 Score: 174 bits (440), Expect = 2.480e-48 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 0
Query: 81 LSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
L+ ILCCLCGR IQPNGANMCGACL+DQVDVTEGIPKKGL IIQCRRCLKWLTKND+W+ FELESA FLA++LKKIPG+ KQ++VDAKW+WT
Sbjct: 60 LATILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 151
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.440e-28 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 0
Query: 78 TKALSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
T L ILCCLCG+SIQPN A +CG CL+ +VD+TE I +KGL + QCR+CL+W KND++ +LES LA+ LK+IPG+ K ++VDA +VWT
Sbjct: 3 TAHLGAILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWT 97
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A1X7T227_AMPQE (60S ribosomal export protein NMD3 n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T227_AMPQE) HSP 1 Score: 97.8 bits (242), Expect = 8.180e-22 Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0
Query: 80 ALSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
++ ILCC CG I+PN ANMC ACL+ QVD+TEGIPK+ V CR C ++L W S LES LA+ LKK+ G+ K +VDA ++WT
Sbjct: 14 SMQRILCCQCGTMIEPNPANMCVACLRTQVDITEGIPKQSTVYF-CRSCERYLQPPSGWVSCSLESRELLALCLKKLKGLGKVHLVDAGFIWT 105
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A1X7V9D4_AMPQE (60S ribosomal export protein NMD3 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V9D4_AMPQE) HSP 1 Score: 97.4 bits (241), Expect = 1.740e-20 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 0
Query: 80 ALSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
++ ILCC CG I+PN ANMC ACL+ QVD+TEGIPK+ + CR C ++L W S LES LA+ LKK+ G+ K +VDA ++WT
Sbjct: 14 SMQRILCCQCGTMIEPNPANMCVACLRTQVDITEGIPKQSTIYF-CRSCERYLQPPSGWVSCSLESRELLALCLKKLKGLGKVHLVDAGFIWT 105
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: UPI0014257D39 (60S ribosomal export protein NMD3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257D39) HSP 1 Score: 96.7 bits (239), Expect = 3.320e-20 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 75 GEGTKALSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
GE T+ ILCCLC I PN ANMC AC++ QVD+TEGIPK+ + C+ C ++L +W S LES LA+ LKK+ G+ K ++DA +VWT
Sbjct: 7 GEVTRTEGTILCCLCETPIAPNPANMCVACMRTQVDITEGIPKQATIYF-CKSCERYLQPPSHWVSCTLESRELLALCLKKLKGLQKVTLIDASFVWT 103
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: UPI001EE62663 (60S ribosomal export protein NMD3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE62663) HSP 1 Score: 96.3 bits (238), Expect = 4.460e-20 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 79 KALSNILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
K+L+ ILCC CG I+PN N C ACL+ Q+D+TEGIPK+ V+ CR+C ++L W S +LES L++ LK++ G+ K +VDA ++WT
Sbjct: 10 KSLNTILCCQCGTPIEPNPTNTCVACLRGQIDITEGIPKQA-VLYFCRKCERYLQPPATWISAQLESRELLSVCLKRLKGLAKVNLVDAGFIWT 102
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A8B6GB91_MYTGA (60S ribosomal export protein NMD3 n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GB91_MYTGA) HSP 1 Score: 91.7 bits (226), Expect = 7.170e-20 Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = 0
Query: 84 ILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQ-EVVDAKWVWT 172
ILCC CG I+PN +NMC ACL+ QVD+TEGIPK+G V+ CR C ++L ++W + +LES L++ LKK+ G +K ++DA +VWT
Sbjct: 15 ILCCQCGTQIEPNPSNMCVACLRTQVDITEGIPKQG-VLYFCRNCERYLQPPNHWVAAQLESRELLSVCLKKLGGGLKTVRLIDAGFVWT 103
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A8B6GBI4_MYTGA (60S ribosomal export protein NMD3 (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GBI4_MYTGA) HSP 1 Score: 91.7 bits (226), Expect = 7.820e-20 Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = 0
Query: 84 ILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQ-EVVDAKWVWT 172
ILCC CG I+PN +NMC ACL+ QVD+TEGIPK+G V+ CR C ++L ++W + +LES L++ LKK+ G +K ++DA +VWT
Sbjct: 15 ILCCQCGTQIEPNPSNMCVACLRTQVDITEGIPKQG-VLYFCRNCERYLQPPNHWVAAQLESRELLSVCLKKLGGGLKTVRLIDAGFVWT 103
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Match: A0A7M7RCM4_STRPU (60S ribosomal export protein NMD3 n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7RCM4_STRPU) HSP 1 Score: 95.1 bits (235), Expect = 1.170e-19 Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 0
Query: 84 ILCCLCGRSIQPNGANMCGACLKDQVDVTEGIPKKGLVIIQCRRCLKWLTKNDNWNSFELESALFLAMILKKIPGIVKQEVVDAKWVWT 172
ILCC CG IQPN ANMC ACL+ QVD+TEGIPK+ V C+ C ++L W + LES LA+ LKK+ G+ K ++DA +VWT
Sbjct: 14 ILCCQCGTPIQPNPANMCVACLRTQVDITEGIPKQAAVYF-CKACERYLQPPAQWITCTLESRELLALCLKKLKGLAKVRLIDAGFVWT 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8637.16203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig8637.16203.1 ID=prot_H-elongata_contig8637.16203.1|Name=mRNA_H-elongata_contig8637.16203.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bpback to top |