prot_H-elongata_contig86328.16201.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86328.16201.1
Unique Nameprot_H-elongata_contig86328.16201.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.650e-41
Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 MVKVGRILTEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLE 139
            MVK GR+L E    TH+GC CHR+E +T+  F GPGV K++ALAR ++TRYT SSQASDRL+++C  V +    V+QDVETRWWST+  + RL+ LRR I   E +D+  PLL   DW VL+++E +L PFM  QK LE
Sbjct:   82 MVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLE 220          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.200e-40
Identity = 72/139 (51.80%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 MVKVGRILTEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLE 139
            MVK GR+L E    TH+GC CHR+E +T+  F GPGV K++ALAR ++TRY  SSQASDRL+++   V +   +V+QDVETRWWST++ + RL+ LRR I   E +D+I PLL   DW VL+++EP+  PF+  QK  E
Sbjct:  126 MVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHRE 264          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.180e-37
Identity = 70/140 (50.00%), Postives = 98/140 (70.00%), Query Frame = 0
Query:    1 MVKVGRIL-TEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLE 139
            M+K GR+L  +    +H+GC+ HR+E  T+ VF+G  +  ++ LAR L+ RY KSSQ + RL +LCG + + PL V+QDVETRWWST ++V RL+YL + I+L ES+D + PLL   DW VL ++EP+L PFM  QK LE
Sbjct:  117 MIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLE 255          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.830e-36
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 0
Query:    1 MVKVGRILTEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLE 139
            MVK GR+L E    +H+GC CHR E +T+  F GPGV K++AL R ++TRYT SSQAS+RL+++C  V +   +V+QDVETRWWST                   +D+I PLL   DW VL+++EP+L PFM  QK LE
Sbjct:   70 MVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLE 192          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.390e-35
Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 0
Query:    1 MVKVGRIL-TEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLE 139
            MVK GR+L        H+GC+ HR+E  T+ VF+G  +  ++A AR ++ RY +SSQ S RL    G + + PL V+QDVETRWWS+ +++ERL+YL + I+L ES DNIAP+L   DW VL ++EP+L PFM  QK LE
Sbjct:  153 MVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLE 291          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: J9JWR9_ACYPI (BED-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JWR9_ACYPI)

HSP 1 Score: 62.8 bits (151), Expect = 1.010e-8
Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 0
Query:   14 FTHVGCTCHRIECVTALVFHGPG-VKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLR-RVIELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLERD 141
            F HV C  H I  V          ++K +   + ++  + +SS A  +LQE+   +G+PPL++ QDV TRW STH + +R+V ++  V+     L      L  V+W ++E    +L  F  + K++  +
Sbjct:  600 FRHVPCFAHSINLVVQQGLKNISHIQKKV---KSIVEHFKRSSHAQSKLQEIQQQMGLPPLKLKQDVVTRWNSTHDMFKRIVEIKDAVVSTLAILQCDVEQLTVVEWQIVEWSTNILQIFAEVTKEISSE 726          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 60.8 bits (146), Expect = 4.540e-8
Identity = 33/127 (25.98%), Postives = 63/127 (49.61%), Query Frame = 0
Query:   16 HVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESL-DNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLERD 141
            H GC  H I  +         ++  +   + ++  + +S  A+++L     T    PL++IQ+V+TRW ST+ ++ER V L   I+   ++ D   P L   +W +L+ +  +L P+  + K +  D
Sbjct:  271 HFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGD 397          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: UPI00084F0F5D (zinc finger BED domain-containing protein 1-like n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=UPI00084F0F5D)

HSP 1 Score: 60.8 bits (146), Expect = 4.540e-8
Identity = 34/132 (25.76%), Postives = 65/132 (49.24%), Query Frame = 0
Query:    8 LTEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQES-LDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKL 138
            ++++  + H  C  H +  +     H  G+ + +   + ++  + +S  ++++L       G  PL++IQDV TRW ST+ ++ER   L   I    + LD   P+L   +W ++  L  VL PF  + K +
Sbjct:  291 ISKELGWKHFSCFAHTLNLIVNDALHTDGITEILEKIKIIVGHFKRSYISNEKLMLFQKNNGDQPLKLIQDVPTRWNSTYFMLERFSKLETAIRSTLAVLDKDLPILTVEEWKIINELCQVLKPFEAVTKTI 422          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: UPI0012676E7D (zinc finger BED domain-containing protein 1-like n=1 Tax=Photinus pyralis TaxID=7054 RepID=UPI0012676E7D)

HSP 1 Score: 60.1 bits (144), Expect = 7.510e-8
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 0
Query:   16 HVGCTCHRIECVTALVFHGPGVKKSIALARFLMTRYTKSSQASDRL---QELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQESLDNIAPL--LGPVDWAVLEMLEPVLSPFMYIQK 136
            H GC  H I  V      G  + + I   ++++  + +S  A+ +L   Q+  GT G+P L+++QDV TRW ST  ++ER + L   ++   +L N+ P   L   +W  ++ +  VL PF  + K
Sbjct:   22 HFGCFAHSINLVVNDGLKGEDISQIINKVKYIVGHFKRSHSATQKLLTYQQNQGT-GVP-LKLLQDVATRWNSTFYMLERFIALEDTVKATMALTNMDPTSHLTTDEWVAIKQILQVLKPFEKVTK 145          
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO)

HSP 1 Score: 59.3 bits (142), Expect = 9.140e-8
Identity = 38/131 (29.01%), Postives = 68/131 (51.91%), Query Frame = 0
Query:   10 EKRMFTHVGCTCHRIECVTALVFHGPGVKKSI-ALARFLMTRYTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVIELQ-ESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKL 138
            +K    H+ C  H I  +         V   I + AR +++ +  S++A+++L      +G  PL+++Q+V+TRW STH +++RL+ LR  +     SL N    L   D+ ++     VL+PF Y  ++L
Sbjct:   53 QKLGLRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEEL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86328.16201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHP9_9PHAE3.650e-4153.96Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE2.200e-4051.80Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI4.180e-3750.00Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KVI1_9PHAE2.830e-3648.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE3.390e-3549.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
J9JWR9_ACYPI1.010e-829.23BED-type domain-containing protein n=1 Tax=Acyrtho... [more]
A0A224XKI7_9HEMI4.540e-825.98Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
UPI00084F0F5D4.540e-825.76zinc finger BED domain-containing protein 1-like n... [more]
UPI0012676E7D7.510e-830.16zinc finger BED domain-containing protein 1-like n... [more]
A0A498MJP0_LABRO9.140e-829.01Zinc finger BED domain-containing 6-like isoform X... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 12..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86328contigH-elongata_contig86328:720..1142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86328.16201.1mRNA_H-elongata_contig86328.16201.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86328 363..1142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86328.16201.1 ID=prot_H-elongata_contig86328.16201.1|Name=mRNA_H-elongata_contig86328.16201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MVKVGRILTEKRMFTHVGCTCHRIECVTALVFHGPGVKKSIALARFLMTR
YTKSSQASDRLQELCGTVGIPPLRVIQDVETRWWSTHSIVERLVYLRRVI
ELQESLDNIAPLLGPVDWAVLEMLEPVLSPFMYIQKKLERD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf