prot_H-elongata_contig8394.16007.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig8394.16007.1
Unique Name	prot_H-elongata_contig8394.16007.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	183

Homology

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D7G402_ECTSI (Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G402_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 6.160e-98
Identity = 149/178 (83.71%), Postives = 167/178 (93.82%), Query Frame = 0

Query:    5 ELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 182
            ELLPQVKA+LILDEDGGRV+CKYHD+ EFPNLGAEAMFEHKLF+KTK+V A +EADVVLLD++V VFRSGLDVHLYVVGS DENELILTAVLDALHETLLILL+GQIDRR+LL+NLALVLL++DEL+DAGKILEIDPSAIANRVLMRGADAR P +S++   QAIA+ REEFIKRMGN
Sbjct:    4 ELLPQVKAVLILDEDGGRVSCKYHDRKEFPNLGAEAMFEHKLFRKTKSVHAPTEADVVLLDDVVAVFRSGLDVHLYVVGSTDENELILTAVLDALHETLLILLRGQIDRRTLLDNLALVLLSIDELVDAGKILEIDPSAIANRVLMRGADARGPQSSDVNFPQAIASVREEFIKRMGN 181

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A836C7T9_9STRA (Coatomer subunit zeta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T9_9STRA)

HSP 1 Score: 234 bits (596), Expect = 7.350e-76
Identity = 121/177 (68.36%), Postives = 149/177 (84.18%), Query Frame = 0

Query:    6 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 182
            LLP VK +LILD+DGGRV+ KY+DK  F     +  FE KL+KKTK ++ARSEADVVLL++ V VFRSG+D+H+YVVGSADENELILT VLDAL+++L  LL+GQ+D+R+LL+NLALVLLA+DEL D GKILE+DPSAI NRVLM+GA    P  +ELT+QQAIATA+EEFI+RMGN
Sbjct:    5 LLPLVKCVLILDDDGGRVSTKYYDKDSFGTHSVQTDFEDKLWKKTKNINARSEADVVLLEDCVAVFRSGVDIHVYVVGSADENELILTLVLDALYDSLNALLRGQLDKRTLLDNLALVLLAVDELCDGGKILEVDPSAITNRVLMKGATGGPPPMTELTIQQAIATAKEEFIRRMGN 181

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2DB18_9STRA (Coatomer subunit zeta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB18_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.100e-60
Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 0

Query:    6 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 182
            ++P VKAILILD DG R+  KY+DK EFPN   +  FE KL++KTK  +AR+EA++++ ++ V V+RS  D    VVGS +ENELILT VLD LHE L +LL+GQ DRRSLL++L LV+L +DE++D G ILE++P +IA+R LMRG D  Q   +ELT+ QA+A+ARE+ IK MGN
Sbjct:   19 IVPLVKAILILDGDGNRLAAKYYDKQEFPNDAEQTAFEQKLYRKTKQTNARTEAEIIMFEKNVAVYRSSNDTRFLVVGSNEENELILTGVLDGLHEALNVLLRGQTDRRSLLDSLELVILCIDEVVDGGMILEMEPQSIASRALMRGVDGGQVPITELTIGQALASAREQLIKSMGN 195

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2V887_9STRA (Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V887_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.940e-58
Identity = 104/189 (55.03%), Postives = 142/189 (75.13%), Query Frame = 0

Query:    3 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMR----GADARQPLAS-----ELTVQQAIATAREEFIKRMGN 182
            E  LLP VK I++LD++G RV+ KY++K EF ++ ++  FE KL KK K  SAR++AD+++LD+ + VFR G DV+  V+GS+DENELILTAVLDAL+++L +LL+ Q+DRR+LLENLALVLLA+DE+ID G +LE D +AIANRVLM+    GA +    AS     ELT+  A+ TA++E IKRM N
Sbjct:    2 ENSLLPTVKGIVVLDDEGCRVSAKYYNKTEFLSISSQIEFEAKLSKKIKGTSARNDADIIILDKNIVVFRGGADVNFCVIGSSDENELILTAVLDALYDSLSLLLRSQLDRRTLLENLALVLLAVDEVIDGGLLLETDATAIANRVLMKDAAGGAQSATGAASSVPFTELTITSALQTAKDELIKRMAN 190

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A6T5Q8Y8_HETAK (Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8Y8_HETAK)

HSP 1 Score: 170 bits (431), Expect = 1.430e-50
Identity = 95/196 (48.47%), Postives = 128/196 (65.31%), Query Frame = 0

Query:    4 QELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLA------------------SELTVQQAIATAREEFIKRMG 181
            +  +P VK ILIL EDG RV+ KY DK  +P+  A+  FE KL +K K  +A++EADV++LD  + VFR+G+D++  + GSA ENELIL  VLD  ++ L  LL+GQ+DRR++L+N+ALVLLA DEL+DAG ILE D   IA RVLMRGA+ + P                    +ELT+  A+ TA+ E IKRM 
Sbjct:    2 EAFMPMVKGILILGEDGSRVSAKYFDKTTYPDHAAQTDFEQKLSRKIKGTTAKNEADVIILDNTIIVFRAGIDLNFCIFGSAQENELILANVLDGFYDALNQLLRGQLDRRTVLDNMALVLLAQDELVDAGLILETDARDIAARVLMRGAEGQGPPGXXXXXXXXXXXXXXPTSFAELTLSSALQTAKSELIKRMA 197

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A8K1FCZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCZ5_PYTOL)

HSP 1 Score: 169 bits (427), Expect = 3.210e-50
Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 0

Query:    8 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 176
            P VKAI +LD DG RV  KY+DK  +P    +   E K+  KTK ++AR EAD+VLL+ IV+VFRSG DV ++VV SA ENE+IL  VLDA  E +  LLKG++DR  +L+N+ LVLL +DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+F
Sbjct:    7 PLVKAIFVLDTDGNRVCAKYYDKT-YPTSKEQLALEKKVHLKTKNINARLEADIVLLENIVSVFRSGSDVTMHVVSSASENEIILLNVLDATFEAVSGLLKGRVDRHVMLDNIELVLLTLDEVVDGGMILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: K3WGV8_GLOUD (Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGV8_GLOUD)

HSP 1 Score: 167 bits (423), Expect = 1.300e-49
Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 0

Query:    8 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 176
            P VKAI ILD DG RV  KY+DK+ +P    +   E KL+ KTK  + R EA+++L+D IV+V+RSG DV ++V+GSA ENE+IL +VLDA  E    LLKG++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+F
Sbjct:    7 PTVKAIFILDSDGNRVCAKYYDKS-YPTAKDQLALEKKLYLKTKNSNPRLEAEIILIDNIVSVYRSGSDVTMHVIGSASENEVILLSVLDATFEAASSLLKGRMDRHVILDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S3JT64_9STRA (Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT64_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.690e-49
Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 0

Query:    3 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 182
            E  L P V ++LILD +G R+  KY+      +L  +  FE KLFKKTK    RS+AD+++LD  + ++R+  D  +YVVGS DENE+IL  VLDAL+  L  LL+GQ+D RS+L+NL L +L++DEL+D G ILEIDP  I NRVLMR  DA  P+ ++++V QA+ATA+++  K MGN
Sbjct:   14 EMNLTPVVLSVLILDGEGRRIIAKYNKGFCQNSLEIQQKFEQKLFKKTKNSPVRSDADIIMLDNTICIYRAAGDAKVYVVGSMDENEIILNMVLDALYTALSTLLRGQMDARSILDNLELTMLSVDELVDGGIILEIDPQNIVNRVLMRPDDAIHPI-TDMSVSQALATAKDQLFKSMGN 192

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BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D0MQV3_PHYIT (Coatomer subunit zeta n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MQV3_PHYIT)

HSP 1 Score: 167 bits (422), Expect = 1.840e-49
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 0

Query:    8 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 176
            P VKAI ILD DG RV  KY+DK+ +P    +   E KL+ KTK  +AR EAD+VL++ IV+VFR G D  ++VVGSA ENELIL  VLD+  + +  LLKG++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+A ELT+ QA A+ARE+F
Sbjct:    7 PSVKAIFILDSDGNRVCAKYYDKS-YPTQKEQLALEKKLYAKTKNSNARLEADIVLIENIVSVFRCGSDTTMHVVGSASENELILLTVLDSAFDAVSNLLKGRMDRHVMLDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPMA-ELTISQAFASAREQF 173

[Close]

BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: F0YL15_AURAN (Coatomer subunit zeta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL15_AURAN)

HSP 1 Score: 165 bits (417), Expect = 1.940e-48
Identity = 91/175 (52.00%), Postives = 126/175 (72.00%), Query Frame = 0

Query:    6 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAE-AMFEHKLFKKTK-TVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIK 178
            L+P V A+L+LD +G R+  KY+    F   G E + FE KLFKKTK T +ARS+ADV++LD  + +FR G D   YV+GSA+ENE+IL  VLD L E L  LL+GQ++ R+LLENL  V+LA+DEL+D G ILE DP +I +RVLMRG +  QP+ +++++ QAIATA+++  K
Sbjct:   10 LVPSVLAVLLLDSEGNRIIAKYYQG--FLGTGLEKSKFEAKLFKKTKNTNTARSDADVIMLDNTIAIFRCGADTRFYVLGSAEENEIILNLVLDGLFEALNTLLRGQLESRALLENLETVMLAVDELVDGGMILETDPQSITSRVLMRGVEGTQPI-TDMSMSQAIATAKDQLFK 181

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G402_ECTSI	6.160e-98	83.71	Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=287...	[more]
A0A836C7T9_9STRA	7.350e-76	68.36	Coatomer subunit zeta n=1 Tax=Tribonema minus TaxI...	[more]
A0A7S2DB18_9STRA	6.100e-60	55.93	Coatomer subunit zeta n=1 Tax=Dictyocha speculum T...	[more]
A0A7S2V887_9STRA	2.940e-58	55.03	Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica ...	[more]
A0A6T5Q8Y8_HETAK	1.430e-50	48.47	Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo...	[more]
A0A8K1FCZ5_PYTOL	3.210e-50	55.03	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WGV8_GLOUD	1.300e-49	53.85	Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=478...	[more]
A0A7S3JT64_9STRA	1.690e-49	50.00	Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensi...	[more]
D0MQV3_PHYIT	1.840e-49	54.44	Coatomer subunit zeta n=18 Tax=Peronosporaceae Tax...	[more]
F0YL15_AURAN	1.940e-48	52.00	Coatomer subunit zeta n=1 Tax=Aureococcus anophage...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 9..152 e-value: 2.5E-15 score: 56.7
None	No IPR available	GENE3D	3.30.450.60		coord: 3..152 e-value: 1.7E-35 score: 124.0
None	No IPR available	PANTHER	PTHR11043:SF0	COAT PROTEIN (COATOMER) ZETA, ISOFORM A	coord: 6..179
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 6..179
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 10..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8394	contig	H-elongata_contig8394:6731..8505 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8394.16007.1	mRNA_H-elongata_contig8394.16007.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig8394 6731..8505 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig8394.16007.1 ID=prot_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
YCEQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKT
KTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALH
ETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLM
RGADARQPLASELTVQQAIATAREEFIKRMGN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR039652	Coatomer_zeta
IPR011012	Longin-like_dom_sf