mRNA_H-elongata_contig8394.16007.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D7G402_ECTSI (Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G402_ECTSI) HSP 1 Score: 290 bits (741), Expect = 6.160e-98 Identity = 149/178 (83.71%), Postives = 167/178 (93.82%), Query Frame = 1
Query: 13 ELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
ELLPQVKA+LILDEDGGRV+CKYHD+ EFPNLGAEAMFEHKLF+KTK+V A +EADVVLLD++V VFRSGLDVHLYVVGS DENELILTAVLDALHETLLILL+GQIDRR+LL+NLALVLL++DEL+DAGKILEIDPSAIANRVLMRGADAR P +S++ QAIA+ REEFIKRMGN
Sbjct: 4 ELLPQVKAVLILDEDGGRVSCKYHDRKEFPNLGAEAMFEHKLFRKTKSVHAPTEADVVLLDDVVAVFRSGLDVHLYVVGSTDENELILTAVLDALHETLLILLRGQIDRRTLLDNLALVLLSIDELVDAGKILEIDPSAIANRVLMRGADARGPQSSDVNFPQAIASVREEFIKRMGN 181
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A836C7T9_9STRA (Coatomer subunit zeta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T9_9STRA) HSP 1 Score: 234 bits (596), Expect = 7.350e-76 Identity = 121/177 (68.36%), Postives = 149/177 (84.18%), Query Frame = 1
Query: 16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
LLP VK +LILD+DGGRV+ KY+DK F + FE KL+KKTK ++ARSEADVVLL++ V VFRSG+D+H+YVVGSADENELILT VLDAL+++L LL+GQ+D+R+LL+NLALVLLA+DEL D GKILE+DPSAI NRVLM+GA P +ELT+QQAIATA+EEFI+RMGN
Sbjct: 5 LLPLVKCVLILDDDGGRVSTKYYDKDSFGTHSVQTDFEDKLWKKTKNINARSEADVVLLEDCVAVFRSGVDIHVYVVGSADENELILTLVLDALYDSLNALLRGQLDKRTLLDNLALVLLAVDELCDGGKILEVDPSAITNRVLMKGATGGPPPMTELTIQQAIATAKEEFIRRMGN 181
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2DB18_9STRA (Coatomer subunit zeta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB18_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.100e-60 Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 1
Query: 16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
++P VKAILILD DG R+ KY+DK EFPN + FE KL++KTK +AR+EA++++ ++ V V+RS D VVGS +ENELILT VLD LHE L +LL+GQ DRRSLL++L LV+L +DE++D G ILE++P +IA+R LMRG D Q +ELT+ QA+A+ARE+ IK MGN
Sbjct: 19 IVPLVKAILILDGDGNRLAAKYYDKQEFPNDAEQTAFEQKLYRKTKQTNARTEAEIIMFEKNVAVYRSSNDTRFLVVGSNEENELILTGVLDGLHEALNVLLRGQTDRRSLLDSLELVILCIDEVVDGGMILEMEPQSIASRALMRGVDGGQVPITELTIGQALASAREQLIKSMGN 195
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2V887_9STRA (Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V887_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.940e-58 Identity = 104/189 (55.03%), Postives = 142/189 (75.13%), Query Frame = 1
Query: 7 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMR----GADARQPLAS-----ELTVQQAIATAREEFIKRMGN 546
E LLP VK I++LD++G RV+ KY++K EF ++ ++ FE KL KK K SAR++AD+++LD+ + VFR G DV+ V+GS+DENELILTAVLDAL+++L +LL+ Q+DRR+LLENLALVLLA+DE+ID G +LE D +AIANRVLM+ GA + AS ELT+ A+ TA++E IKRM N
Sbjct: 2 ENSLLPTVKGIVVLDDEGCRVSAKYYNKTEFLSISSQIEFEAKLSKKIKGTSARNDADIIILDKNIVVFRGGADVNFCVIGSSDENELILTAVLDALYDSLSLLLRSQLDRRTLLENLALVLLAVDEVIDGGLLLETDATAIANRVLMKDAAGGAQSATGAASSVPFTELTITSALQTAKDELIKRMAN 190
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A6T5Q8Y8_HETAK (Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8Y8_HETAK) HSP 1 Score: 170 bits (431), Expect = 1.430e-50 Identity = 95/196 (48.47%), Postives = 128/196 (65.31%), Query Frame = 1
Query: 10 QELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLA------------------SELTVQQAIATAREEFIKRMG 543
+ +P VK ILIL EDG RV+ KY DK +P+ A+ FE KL +K K +A++EADV++LD + VFR+G+D++ + GSA ENELIL VLD ++ L LL+GQ+DRR++L+N+ALVLLA DEL+DAG ILE D IA RVLMRGA+ + P +ELT+ A+ TA+ E IKRM
Sbjct: 2 EAFMPMVKGILILGEDGSRVSAKYFDKTTYPDHAAQTDFEQKLSRKIKGTTAKNEADVIILDNTIIVFRAGIDLNFCIFGSAQENELILANVLDGFYDALNQLLRGQLDRRTVLDNMALVLLAQDELVDAGLILETDARDIAARVLMRGAEGQGPPGXXXXXXXXXXXXXXPTSFAELTLSSALQTAKSELIKRMA 197
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A8K1FCZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCZ5_PYTOL) HSP 1 Score: 169 bits (427), Expect = 3.210e-50 Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
P VKAI +LD DG RV KY+DK +P + E K+ KTK ++AR EAD+VLL+ IV+VFRSG DV ++VV SA ENE+IL VLDA E + LLKG++DR +L+N+ LVLL +DE++D G ILE+D +I+NRVLMRG D P+ SELT+ QA A+ARE+F
Sbjct: 7 PLVKAIFVLDTDGNRVCAKYYDKT-YPTSKEQLALEKKVHLKTKNINARLEADIVLLENIVSVFRSGSDVTMHVVSSASENEIILLNVLDATFEAVSGLLKGRVDRHVMLDNIELVLLTLDEVVDGGMILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: K3WGV8_GLOUD (Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGV8_GLOUD) HSP 1 Score: 167 bits (423), Expect = 1.300e-49 Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
P VKAI ILD DG RV KY+DK+ +P + E KL+ KTK + R EA+++L+D IV+V+RSG DV ++V+GSA ENE+IL +VLDA E LLKG++DR +L+N+ LVLL DE++D G ILE+D +I+NRVLMRG D P+ SELT+ QA A+ARE+F
Sbjct: 7 PTVKAIFILDSDGNRVCAKYYDKS-YPTAKDQLALEKKLYLKTKNSNPRLEAEIILIDNIVSVYRSGSDVTMHVIGSASENEVILLSVLDATFEAASSLLKGRMDRHVILDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S3JT64_9STRA (Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT64_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.690e-49 Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 7 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
E L P V ++LILD +G R+ KY+ +L + FE KLFKKTK RS+AD+++LD + ++R+ D +YVVGS DENE+IL VLDAL+ L LL+GQ+D RS+L+NL L +L++DEL+D G ILEIDP I NRVLMR DA P+ ++++V QA+ATA+++ K MGN
Sbjct: 14 EMNLTPVVLSVLILDGEGRRIIAKYNKGFCQNSLEIQQKFEQKLFKKTKNSPVRSDADIIMLDNTICIYRAAGDAKVYVVGSMDENEIILNMVLDALYTALSTLLRGQMDARSILDNLELTMLSVDELVDGGIILEIDPQNIVNRVLMRPDDAIHPI-TDMSVSQALATAKDQLFKSMGN 192
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D0MQV3_PHYIT (Coatomer subunit zeta n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MQV3_PHYIT) HSP 1 Score: 167 bits (422), Expect = 1.840e-49 Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 1
Query: 22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
P VKAI ILD DG RV KY+DK+ +P + E KL+ KTK +AR EAD+VL++ IV+VFR G D ++VVGSA ENELIL VLD+ + + LLKG++DR +L+N+ LVLL DE++D G ILE+D +I+NRVLMRG D P+A ELT+ QA A+ARE+F
Sbjct: 7 PSVKAIFILDSDGNRVCAKYYDKS-YPTQKEQLALEKKLYAKTKNSNARLEADIVLIENIVSVFRCGSDTTMHVVGSASENELILLTVLDSAFDAVSNLLKGRMDRHVMLDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPMA-ELTISQAFASAREQF 173
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: F0YL15_AURAN (Coatomer subunit zeta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL15_AURAN) HSP 1 Score: 165 bits (417), Expect = 1.940e-48 Identity = 91/175 (52.00%), Postives = 126/175 (72.00%), Query Frame = 1
Query: 16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAE-AMFEHKLFKKTK-TVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIK 534
L+P V A+L+LD +G R+ KY+ F G E + FE KLFKKTK T +ARS+ADV++LD + +FR G D YV+GSA+ENE+IL VLD L E L LL+GQ++ R+LLENL V+LA+DEL+D G ILE DP +I +RVLMRG + QP+ +++++ QAIATA+++ K
Sbjct: 10 LVPSVLAVLLLDSEGNRIIAKYYQG--FLGTGLEKSKFEAKLFKKTKNTNTARSDADVIMLDNTIAIFRCGADTRFYVLGSAEENEIILNLVLDGLFEALNTLLRGQLESRALLENLETVMLAVDELVDGGMILETDPQSITSRVLMRGVEGTQPI-TDMSMSQAIATAKDQLFK 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8394.16007.1 >prot_H-elongata_contig8394.16007.1 ID=prot_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp YCEQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTback to top mRNA from alignment at H-elongata_contig8394:6731..8505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8394.16007.1 ID=mRNA_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1775bp|location=Sequence derived from alignment at H-elongata_contig8394:6731..8505- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8394:6731..8505- >mRNA_H-elongata_contig8394.16007.1 ID=mRNA_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig8394:6731..8505- (Himanthalia elongata Himel1 dioecious)back to top |