mRNA_H-elongata_contig8394.16007.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8394.16007.1
Unique NamemRNA_H-elongata_contig8394.16007.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D7G402_ECTSI (Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G402_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 6.160e-98
Identity = 149/178 (83.71%), Postives = 167/178 (93.82%), Query Frame = 1
Query:   13 ELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
            ELLPQVKA+LILDEDGGRV+CKYHD+ EFPNLGAEAMFEHKLF+KTK+V A +EADVVLLD++V VFRSGLDVHLYVVGS DENELILTAVLDALHETLLILL+GQIDRR+LL+NLALVLL++DEL+DAGKILEIDPSAIANRVLMRGADAR P +S++   QAIA+ REEFIKRMGN
Sbjct:    4 ELLPQVKAVLILDEDGGRVSCKYHDRKEFPNLGAEAMFEHKLFRKTKSVHAPTEADVVLLDDVVAVFRSGLDVHLYVVGSTDENELILTAVLDALHETLLILLRGQIDRRTLLDNLALVLLSIDELVDAGKILEIDPSAIANRVLMRGADARGPQSSDVNFPQAIASVREEFIKRMGN 181          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A836C7T9_9STRA (Coatomer subunit zeta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T9_9STRA)

HSP 1 Score: 234 bits (596), Expect = 7.350e-76
Identity = 121/177 (68.36%), Postives = 149/177 (84.18%), Query Frame = 1
Query:   16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
            LLP VK +LILD+DGGRV+ KY+DK  F     +  FE KL+KKTK ++ARSEADVVLL++ V VFRSG+D+H+YVVGSADENELILT VLDAL+++L  LL+GQ+D+R+LL+NLALVLLA+DEL D GKILE+DPSAI NRVLM+GA    P  +ELT+QQAIATA+EEFI+RMGN
Sbjct:    5 LLPLVKCVLILDDDGGRVSTKYYDKDSFGTHSVQTDFEDKLWKKTKNINARSEADVVLLEDCVAVFRSGVDIHVYVVGSADENELILTLVLDALYDSLNALLRGQLDKRTLLDNLALVLLAVDELCDGGKILEVDPSAITNRVLMKGATGGPPPMTELTIQQAIATAKEEFIRRMGN 181          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2DB18_9STRA (Coatomer subunit zeta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB18_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.100e-60
Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 1
Query:   16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
            ++P VKAILILD DG R+  KY+DK EFPN   +  FE KL++KTK  +AR+EA++++ ++ V V+RS  D    VVGS +ENELILT VLD LHE L +LL+GQ DRRSLL++L LV+L +DE++D G ILE++P +IA+R LMRG D  Q   +ELT+ QA+A+ARE+ IK MGN
Sbjct:   19 IVPLVKAILILDGDGNRLAAKYYDKQEFPNDAEQTAFEQKLYRKTKQTNARTEAEIIMFEKNVAVYRSSNDTRFLVVGSNEENELILTGVLDGLHEALNVLLRGQTDRRSLLDSLELVILCIDEVVDGGMILEMEPQSIASRALMRGVDGGQVPITELTIGQALASAREQLIKSMGN 195          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S2V887_9STRA (Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V887_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.940e-58
Identity = 104/189 (55.03%), Postives = 142/189 (75.13%), Query Frame = 1
Query:    7 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMR----GADARQPLAS-----ELTVQQAIATAREEFIKRMGN 546
            E  LLP VK I++LD++G RV+ KY++K EF ++ ++  FE KL KK K  SAR++AD+++LD+ + VFR G DV+  V+GS+DENELILTAVLDAL+++L +LL+ Q+DRR+LLENLALVLLA+DE+ID G +LE D +AIANRVLM+    GA +    AS     ELT+  A+ TA++E IKRM N
Sbjct:    2 ENSLLPTVKGIVVLDDEGCRVSAKYYNKTEFLSISSQIEFEAKLSKKIKGTSARNDADIIILDKNIVVFRGGADVNFCVIGSSDENELILTAVLDALYDSLSLLLRSQLDRRTLLENLALVLLAVDEVIDGGLLLETDATAIANRVLMKDAAGGAQSATGAASSVPFTELTITSALQTAKDELIKRMAN 190          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A6T5Q8Y8_HETAK (Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8Y8_HETAK)

HSP 1 Score: 170 bits (431), Expect = 1.430e-50
Identity = 95/196 (48.47%), Postives = 128/196 (65.31%), Query Frame = 1
Query:   10 QELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLA------------------SELTVQQAIATAREEFIKRMG 543
            +  +P VK ILIL EDG RV+ KY DK  +P+  A+  FE KL +K K  +A++EADV++LD  + VFR+G+D++  + GSA ENELIL  VLD  ++ L  LL+GQ+DRR++L+N+ALVLLA DEL+DAG ILE D   IA RVLMRGA+ + P                    +ELT+  A+ TA+ E IKRM 
Sbjct:    2 EAFMPMVKGILILGEDGSRVSAKYFDKTTYPDHAAQTDFEQKLSRKIKGTTAKNEADVIILDNTIIVFRAGIDLNFCIFGSAQENELILANVLDGFYDALNQLLRGQLDRRTVLDNMALVLLAQDELVDAGLILETDARDIAARVLMRGAEGQGPPGXXXXXXXXXXXXXXPTSFAELTLSSALQTAKSELIKRMA 197          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A8K1FCZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCZ5_PYTOL)

HSP 1 Score: 169 bits (427), Expect = 3.210e-50
Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 1
Query:   22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
            P VKAI +LD DG RV  KY+DK  +P    +   E K+  KTK ++AR EAD+VLL+ IV+VFRSG DV ++VV SA ENE+IL  VLDA  E +  LLKG++DR  +L+N+ LVLL +DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+F
Sbjct:    7 PLVKAIFVLDTDGNRVCAKYYDKT-YPTSKEQLALEKKVHLKTKNINARLEADIVLLENIVSVFRSGSDVTMHVVSSASENEIILLNVLDATFEAVSGLLKGRVDRHVMLDNIELVLLTLDEVVDGGMILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: K3WGV8_GLOUD (Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGV8_GLOUD)

HSP 1 Score: 167 bits (423), Expect = 1.300e-49
Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 1
Query:   22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
            P VKAI ILD DG RV  KY+DK+ +P    +   E KL+ KTK  + R EA+++L+D IV+V+RSG DV ++V+GSA ENE+IL +VLDA  E    LLKG++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+F
Sbjct:    7 PTVKAIFILDSDGNRVCAKYYDKS-YPTAKDQLALEKKLYLKTKNSNPRLEAEIILIDNIVSVYRSGSDVTMHVIGSASENEVILLSVLDATFEAASSLLKGRMDRHVILDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQF 173          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: A0A7S3JT64_9STRA (Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT64_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.690e-49
Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 1
Query:    7 EQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIKRMGN 546
            E  L P V ++LILD +G R+  KY+      +L  +  FE KLFKKTK    RS+AD+++LD  + ++R+  D  +YVVGS DENE+IL  VLDAL+  L  LL+GQ+D RS+L+NL L +L++DEL+D G ILEIDP  I NRVLMR  DA  P+ ++++V QA+ATA+++  K MGN
Sbjct:   14 EMNLTPVVLSVLILDGEGRRIIAKYNKGFCQNSLEIQQKFEQKLFKKTKNSPVRSDADIIMLDNTICIYRAAGDAKVYVVGSMDENEIILNMVLDALYTALSTLLRGQMDARSILDNLELTMLSVDELVDGGIILEIDPQNIVNRVLMRPDDAIHPI-TDMSVSQALATAKDQLFKSMGN 192          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: D0MQV3_PHYIT (Coatomer subunit zeta n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MQV3_PHYIT)

HSP 1 Score: 167 bits (422), Expect = 1.840e-49
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 1
Query:   22 PQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKTKTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEF 528
            P VKAI ILD DG RV  KY+DK+ +P    +   E KL+ KTK  +AR EAD+VL++ IV+VFR G D  ++VVGSA ENELIL  VLD+  + +  LLKG++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+A ELT+ QA A+ARE+F
Sbjct:    7 PSVKAIFILDSDGNRVCAKYYDKS-YPTQKEQLALEKKLYAKTKNSNARLEADIVLIENIVSVFRCGSDTTMHVVGSASENELILLTVLDSAFDAVSNLLKGRMDRHVMLDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPMA-ELTISQAFASAREQF 173          
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Match: F0YL15_AURAN (Coatomer subunit zeta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL15_AURAN)

HSP 1 Score: 165 bits (417), Expect = 1.940e-48
Identity = 91/175 (52.00%), Postives = 126/175 (72.00%), Query Frame = 1
Query:   16 LLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAE-AMFEHKLFKKTK-TVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALHETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREEFIK 534
            L+P V A+L+LD +G R+  KY+    F   G E + FE KLFKKTK T +ARS+ADV++LD  + +FR G D   YV+GSA+ENE+IL  VLD L E L  LL+GQ++ R+LLENL  V+LA+DEL+D G ILE DP +I +RVLMRG +  QP+ +++++ QAIATA+++  K
Sbjct:   10 LVPSVLAVLLLDSEGNRIIAKYYQG--FLGTGLEKSKFEAKLFKKTKNTNTARSDADVIMLDNTIAIFRCGADTRFYVLGSAEENEIILNLVLDGLFEALNTLLRGQLESRALLENLETVMLAVDELVDGGMILETDPQSITSRVLMRGVEGTQPI-TDMSMSQAIATAKDQLFK 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8394.16007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G402_ECTSI6.160e-9883.71Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836C7T9_9STRA7.350e-7668.36Coatomer subunit zeta n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2DB18_9STRA6.100e-6055.93Coatomer subunit zeta n=1 Tax=Dictyocha speculum T... [more]
A0A7S2V887_9STRA2.940e-5855.03Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica ... [more]
A0A6T5Q8Y8_HETAK1.430e-5048.47Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo... [more]
A0A8K1FCZ5_PYTOL3.210e-5055.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WGV8_GLOUD1.300e-4953.85Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=478... [more]
A0A7S3JT64_9STRA1.690e-4950.00Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensi... [more]
D0MQV3_PHYIT1.840e-4954.44Coatomer subunit zeta n=18 Tax=Peronosporaceae Tax... [more]
F0YL15_AURAN1.940e-4852.00Coatomer subunit zeta n=1 Tax=Aureococcus anophage... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8394contigH-elongata_contig8394:6731..8505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue7.5e-76
Seed eggNOG ortholog2880.D7G402
Preferred nameCOPZ1
KEGG koko:K20472
GOsGO:0000003,GO:0000139,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005801,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008104,GO:0008150,GO:0009790,GO:0009792,GO:0009987,GO:0009994,GO:0010883,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030120,GO:0030126,GO:0030133,GO:0030135,GO:0030137,GO:0030154,GO:0030659,GO:0030660,GO:0030662,GO:0030663,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0046907,GO:0048193,GO:0048468,GO:0048475,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:1901998,GO:1905952
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG5541@1,KOG3343@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCoatomer protein complex, zeta sub-unit
Ec32 orthologEc-19_000620.1
Exons5
Model size549
Cds size549
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8394.16007.1prot_H-elongata_contig8394.16007.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8394 6731..8505 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931244.3058174-CDS-H-elongata_contig8394:6730..67781622931244.3058174-CDS-H-elongata_contig8394:6730..6778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 6731..6778 -
1691679757.1481183-CDS-H-elongata_contig8394:6730..67781691679757.1481183-CDS-H-elongata_contig8394:6730..6778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 6731..6778 -
1622931244.3348653-CDS-H-elongata_contig8394:7091..72621622931244.3348653-CDS-H-elongata_contig8394:7091..7262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 7092..7262 -
1691679757.1607513-CDS-H-elongata_contig8394:7091..72621691679757.1607513-CDS-H-elongata_contig8394:7091..7262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 7092..7262 -
1622931244.3485174-CDS-H-elongata_contig8394:7609..76961622931244.3485174-CDS-H-elongata_contig8394:7609..7696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 7610..7696 -
1691679757.1775463-CDS-H-elongata_contig8394:7609..76961691679757.1775463-CDS-H-elongata_contig8394:7609..7696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 7610..7696 -
1622931244.3644032-CDS-H-elongata_contig8394:7999..80861622931244.3644032-CDS-H-elongata_contig8394:7999..8086Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 8000..8086 -
1691679757.1882122-CDS-H-elongata_contig8394:7999..80861691679757.1882122-CDS-H-elongata_contig8394:7999..8086Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 8000..8086 -
1622931244.379223-CDS-H-elongata_contig8394:8349..85051622931244.379223-CDS-H-elongata_contig8394:8349..8505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 8350..8505 -
1691679757.1963246-CDS-H-elongata_contig8394:8349..85051691679757.1963246-CDS-H-elongata_contig8394:8349..8505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8394 8350..8505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8394.16007.1

>prot_H-elongata_contig8394.16007.1 ID=prot_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
YCEQELLPQVKAILILDEDGGRVTCKYHDKAEFPNLGAEAMFEHKLFKKT
KTVSARSEADVVLLDEIVTVFRSGLDVHLYVVGSADENELILTAVLDALH
ETLLILLKGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLM
RGADARQPLASELTVQQAIATAREEFIKRMGN*
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mRNA from alignment at H-elongata_contig8394:6731..8505-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8394.16007.1 ID=mRNA_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1775bp|location=Sequence derived from alignment at H-elongata_contig8394:6731..8505- (Himanthalia elongata Himel1 dioecious)
TATTGCGAGCAGGAACTGCTTCCCCAAGTAAAGGCGATCCTCATCCTTGA TGAGGATGGCGGGCGCGTGACGTGCAAATACCACGACAAGGCGGAGTTCC CCAATCTTGGGGCGGAGGCCATGTTCGAGCACAAGCTTTTCAAGAAAACC AAGACCGTAAGTCCCTGGAGGACATTCCTTTATTTTCACTATCCATGCGA ATCGTGCCAGCGCACCACACACGATATATCAAAACGTAACAACGAAGCTG AGCTCTACCCCGCAGGCTCAACTCTTCCCAGTCAGAGTCCACGCGAGGGC CCACCCCCGTCCCACGTGTTCTTGAGATTACCCCTCCCCTCATCACAGCC TCCGGCTTTATGAGCCATCCAAACCTCCACATATATATGGCTCTGGCGTT TGTGCATCGTGCTGTCTAGGTCAGCGCTAGGTCGGAGGCGGACGTGGTGC TGCTGGACGAAATCGTTACGGTTTTTAGGAGCGGACTGGATGTTCACCTT TACGTCGTGAGTTCCGTTTTGCACCCTTTGCGTCACCTGAACAGTTGGCT GTCTCCCGGAGTTCAGGACCACTGATGCATTCTGAGGTACATTCTGAGAC ACCGCGACATACCCTTTCTTGTCAGCGTGGACAGAGGGGGGTCGATTGCC CTCTCTAGGGGGACGACAACTTATCGGTTTCATTCCCAGAGGGCGTTGGT GGGGGTTGCATTTGCCTTTGATCCCCTCCATCGTGCCGTGAGTGCGTGGC GCCTTGCCCTAACGGGCCCGTGTTTTCGCCGCCTGCCATCGGTTGGTTCC CATGAGCAGGTTGGTTCGGCGGACGAGAATGAACTCATTCTCACCGCTGT GCTCGACGCCTTGCACGAGACCCTGCTCATTCTGCTAAAAGGACAGGTAA CCTACCTCAGACGGCAACCCTTCTGTAACGCGGCCTGTTTTACGATATTC CATCATCGCCCAGTCATAGACGTGATTTCGTTGCCCAACCCAGGCTTCTC CTTTTTACAGAATGGGTGTCGCTAATAGCCAACTGCATCGTCAATCCTCT TCCGTAAAAGACCTTGGGGTCCCCAGCTCTGCTTATTTAAAAAAGAATCC CATCACACCTCGTGTGCGCTCCGCTGCGTGATGACATCGATCACCTACCT GTACGCGCGCGATGACCAATCGATTAACACTCGCCCGGTTGGCGCTACTG ATCGGTCCCTTTTTCTGTTTCGTCGCACCCGGTCTACGTTCAGATCGACC GACGATCGCTGCTGGAAAACCTAGCGTTGGTCCTCCTTGCCATGGATGAG CTCATAGATGCCGGGAAAATCCTTGAGATTGATCCCTCAGCGATTGCCAA CCGCGTCCTGATGAGAGGCGCAGACGCTAGGCAGCCCTTGGCCTCGGAGC TGACCGTTCAACAGGTACTAAGTTTCACGTGATTGCCCGAGCGCTTTTTG TTTCGGTGGCTCAAGAAAGAATTCGTGGCGCTGCACGCGCCGCTTCGTTT TGAAAGGGCGAATGGGAGCGGAAACAGTGCGATACGGTGGTTGAAGGGAT GGACGCTCGCGGAGATCGTAGCCGCGTTCGAGGGGTGCAAAGCGAACCCT AGCCCGACCGTTTGGGAGACCGTTGGTGAGGCCGCCGTTTATCTACGGCG CATCGTGCTTGATCGGAGTCGCGTCGCCCACTTCCACCTCGCCGTCCCTC GATCGATCCGGTGTGTCATTCGTGCAGGCCATCGCAACCGCGCGCGAGGA GTTCATCAAGCGAATGGGAAATTAG
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Coding sequence (CDS) from alignment at H-elongata_contig8394:6731..8505-

>mRNA_H-elongata_contig8394.16007.1 ID=mRNA_H-elongata_contig8394.16007.1|Name=mRNA_H-elongata_contig8394.16007.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig8394:6731..8505- (Himanthalia elongata Himel1 dioecious)
TATTGCGAGCAGGAACTGCTTCCCCAAGTAAAGGCGATCCTCATCCTTGA
TGAGGATGGCGGGCGCGTGACGTGCAAATACCACGACAAGGCGGAGTTCC
CCAATCTTGGGGCGGAGGCCATGTTCGAGCACAAGCTTTTCAAGAAAACC
AAGACCTATTGCGAGCAGGAACTGCTTCCCCAAGTAAAGGCGATCCTCAT
CCTTGATGAGGATGGCGGGCGCGTGACGTGCAAATACCACGACAAGGCGG
AGTTCCCCAATCTTGGGGCGGAGGCCATGTTCGAGCACAAGCTTTTCAAG
AAAACCAAGACCGTCAGCGCTAGGTCGGAGGCGGACGTGGTGCTGCTGGA
CGAAATCGTTACGGTTTTTAGGAGCGGACTGGATGTTCACCTTTACGTCG
TCAGCGCTAGGTCGGAGGCGGACGTGGTGCTGCTGGACGAAATCGTTACG
GTTTTTAGGAGCGGACTGGATGTTCACCTTTACGTCGTTGGTTCGGCGGA
CGAGAATGAACTCATTCTCACCGCTGTGCTCGACGCCTTGCACGAGACCC
TGCTCATTCTGCTAAAAGGACAGGTTGGTTCGGCGGACGAGAATGAACTC
ATTCTCACCGCTGTGCTCGACGCCTTGCACGAGACCCTGCTCATTCTGCT
AAAAGGACAGATCGACCGACGATCGCTGCTGGAAAACCTAGCGTTGGTCC
TCCTTGCCATGGATGAGCTCATAGATGCCGGGAAAATCCTTGAGATTGAT
CCCTCAGCGATTGCCAACCGCGTCCTGATGAGAGGCGCAGACGCTAGGCA
GCCCTTGGCCTCGGAGCTGACCGTTCAACAGATCGACCGACGATCGCTGC
TGGAAAACCTAGCGTTGGTCCTCCTTGCCATGGATGAGCTCATAGATGCC
GGGAAAATCCTTGAGATTGATCCCTCAGCGATTGCCAACCGCGTCCTGAT
GAGAGGCGCAGACGCTAGGCAGCCCTTGGCCTCGGAGCTGACCGTTCAAC
AGGCCATCGCAACCGCGCGCGAGGAGTTCATCAAGCGAATGGGAAATTAG
GCCATCGCAACCGCGCGCGAGGAGTTCATCAAGCGAATGGGAAATTAG
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