prot_H-elongata_contig82276.15884.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82276.15884.1
Unique Nameprot_H-elongata_contig82276.15884.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.370e-39
Identity = 72/81 (88.89%), Postives = 79/81 (97.53%), Query Frame = 0
Query:    1 MVEVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            MVEVHRFVVD+Y+QKFP LDSLIPQPADYV+TVQVMRNEMDMTQV+L+SALPQTTVMVVSVTGSTTSGQPLSE+DL EC+K
Sbjct:  176 MVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIK 256          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.140e-24
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MVEVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            MV VH++VVD Y++KFP L+SL+PQ  DY++ VQ + NEMDMT VDL   LP   V+ VS+TGSTTSGQPLSE DL +C++
Sbjct:  123 MVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQ 203          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.220e-24
Identity = 48/81 (59.26%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MVEVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            +V+VHRFVVD Y+ KFP L+S++  P DY++TVQ+M+NEMDMT++ L++ LPQT+VMVVSVTGSTT G+ L E +L+  L+
Sbjct:  132 LVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLE 212          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7R9UDN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDN0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.610e-24
Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    3 EVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            +V RFV ++YA KFP L+SL+P+  DY +TV+V++N MD+++V L   LP  TVMVVSVTGSTTSG+PL E+ LQECLK
Sbjct:  125 KVFRFVAEQYAVKFPELESLVPKALDYARTVRVIKNNMDLSRVQLNDILPSATVMVVSVTGSTTSGEPLKEEVLQECLK 203          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: F0YQT3_AURAN (Nop domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQT3_AURAN)

HSP 1 Score: 99.4 bits (246), Expect = 4.670e-23
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 0
Query:    3 EVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECL 80
            ++HR+V D YA+KFP LD+L+P   +Y++ V  MRNEMDMT VDL   LP T VMVVSVTGSTTSGQPL   +L EC+
Sbjct:  102 QLHRYVNDVYAKKFPELDTLVPSKMEYMRVVDRMRNEMDMTAVDLSDVLPPTVVMVVSVTGSTTSGQPLGAGELDECV 179          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7S0WKG3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WKG3_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 5.170e-23
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    4 VHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLKA 82
            VH+F+ DKY  KFP L+SL+  P DY + V+ + NEMDMT V+L+  LP  T+MVVSVTGSTT+G+PLSE+DL + L A
Sbjct:  104 VHQFIRDKYRAKFPELESLVLHPIDYARVVKAIGNEMDMTNVELDGVLPSATIMVVSVTGSTTNGEPLSENDLNKTLAA 182          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7S4E5R5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5R5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 9.660e-23
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    3 EVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            EVH +V D Y +KFP L++L+P   +Y++ V  M NEMDMTQVDL   LP T VMVVSVTGSTTSGQPL+E +L EC++
Sbjct:  128 EVHAYVNDLYGKKFPELETLVPSKLEYLRVVAQMGNEMDMTQVDLSGILPPTVVMVVSVTGSTTSGQPLTESELGECMR 206          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7S3ZRH5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRH5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.100e-22
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    3 EVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            EVH +V D Y +KFP L++L+P   +Y++ V  M NEMDMTQVDL   LP T VMVVSVTGSTTSGQPL+E +L EC++
Sbjct:  128 EVHAYVNDLYGKKFPELETLVPSKLEYLRVVAQMGNEMDMTQVDLSGILPPTVVMVVSVTGSTTSGQPLTESELGECMR 206          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: C1FFZ1_MICCC (Nop domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FFZ1_MICCC)

HSP 1 Score: 99.0 bits (245), Expect = 2.120e-22
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    4 VHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLKA 82
            VH F+ D+Y  KFP L+SL+  P DY + V+ + NEMDMT+V+LES LP  T+MVVSVTGSTT+GQPLS DDL   ++A
Sbjct:  124 VHNFIRDRYRSKFPELESLVMHPIDYARVVKAIGNEMDMTKVELESVLPSATIMVVSVTGSTTNGQPLSADDLDTTVRA 202          
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK)

HSP 1 Score: 98.2 bits (243), Expect = 2.870e-22
Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MVEVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEDDLQECLK 81
            ++ +HR+V D Y++KFP L+SL+P   +Y++ VQ + NEMDMT+V+L   LP  +VM+VSVTGSTTSGQPL E DL ECL+
Sbjct:   69 IINIHRYVCDVYSKKFPELESLLPNKLEYMQVVQRIGNEMDMTEVELSDILPSASVMLVSVTGSTTSGQPLPEADLAECLE 149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82276.15884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q2_9PHAE1.370e-3988.89Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2C7I0_9STRA3.140e-2460.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CKH5_9STRA6.220e-2459.26Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7R9UDN0_9STRA7.610e-2460.76Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
F0YQT3_AURAN4.670e-2361.54Nop domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S0WKG3_9CHLO5.170e-2358.23Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A7S4E5R5_9STRA9.660e-2360.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZRH5_9STRA2.100e-2260.76Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
C1FFZ1_MICCC2.120e-2259.49Nop domain-containing protein n=2 Tax=Micromonas T... [more]
A0A7S4DKU2_HETAK2.870e-2256.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.460coord: 17..67
e-value: 1.3E-5
score: 27.4
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 10..79
e-value: 1.3E-5
score: 27.4
IPR002687Nop domainPFAMPF01798Nopcoord: 3..82
e-value: 9.7E-17
score: 61.2
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31PANTHERPTHR13904PRE-MRNA SPLICING FACTOR PRP31coord: 2..82
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 3..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82276contigH-elongata_contig82276:1290..2345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82276.15884.1mRNA_H-elongata_contig82276.15884.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82276 1275..2345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82276.15884.1 ID=prot_H-elongata_contig82276.15884.1|Name=mRNA_H-elongata_contig82276.15884.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MVEVHRFVVDKYAQKFPGLDSLIPQPADYVKTVQVMRNEMDMTQVDLESA
LPQTTVMVVSVTGSTTSGQPLSEDDLQECLKAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029012Helix_hairpin_bin_sf
IPR002687Nop_dom
IPR027105Prp31
IPR036070Nop_dom_sf