prot_H-elongata_contig81705.15837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81705.15837.1
Unique Nameprot_H-elongata_contig81705.15837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
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BLAST of mRNA_H-elongata_contig81705.15837.1 vs. uniprot
Match: D8LB26_ECTSI (ELMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB26_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.620e-17
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0 
Query:    2 YYTQGDEEDPETGVRSSFRVERPAPPRALTLYRIKEAFPFAGTFHFRLKV 51
            Y  QGD++DPETGV+SSFRV+RP PPR LTL+R++E FPF GTFHFRLKV
Sbjct:    9 YVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKV 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81705.15837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB26_ECTSI1.620e-1774.00ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81705contigH-elongata_contig81705:2335..2508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81705.15837.1mRNA_H-elongata_contig81705.15837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81705 2335..2508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81705.15837.1 ID=prot_H-elongata_contig81705.15837.1|Name=mRNA_H-elongata_contig81705.15837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
AYYTQGDEEDPETGVRSSFRVERPAPPRALTLYRIKEAFPFAGTFHFRLK
VRLFNLK*
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