prot_H-elongata_contig81633.15830.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81633.15830.1
Unique Nameprot_H-elongata_contig81633.15830.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length277
Homology
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BLAST of mRNA_H-elongata_contig81633.15830.1 vs. uniprot
Match: D7FNB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB8_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 5.860e-89
Identity = 161/280 (57.50%), Postives = 195/280 (69.64%), Query Frame = 0 
Query:    1 QYSEALTVETSSGGSDLDPLRLKAGAVVEFLDWILPEAPTPGA-VGGY-LGFPAEALLTTGEEAAGTLLGLEHHNVGGLLARGDLCRLRARMAMLSGASLEEEGHWREESVQWFVRAVTVAPQNAEALSTAGEGSLEYGKRSLRLYRNIV--EAGQGRVAISVSPPPL--HAQGMQTSAIARLQEAGSLFSRAASAEASDSDVAYNAACAYALCGDHGSCSRAFREFCRRLADAGTATAGRRDAAIRSLREARSDGDLESVRTTDWFVNLVRRTEANLRG 274
            +YSEAL  ETSSGGSD D LRLKAG VV FLDW LPEA  P A +GG  +GFPAE +L  GEEA   LL L+  ++ G+LA+ DLCRLRAR +MLSGAS+EEEG  REESV WF RA T  PQ+A  L+ AGEG LEYG+RS+ LY+ +     GQ       +P P   H +GM+ SAI RLQEAG L + A S + SD++  YNAACA+AL GD GSC RA  E+CRRL  A   ++G+R+AA RSLREA +D DLE VR   WFV+L+R T+A L G
Sbjct:  246 KYSEALASETSSGGSDTDILRLKAGTVVNFLDWALPEALPPEAPIGGSDVGFPAEEILAAGEEAVQALLALDDSSMDGMLAKADLCRLRARTSMLSGASVEEEGARREESVAWFARAATGFPQDAGVLTAAGEGLLEYGRRSMALYQEVAVGSVGQSPYGYGSAPGPAAPHVEGMRMSAITRLQEAGRLLAEACSFDVSDANSPYNAACAFALAGDPGSCFRALSEYCRRLTLAANGSSGKREAARRSLREAGNDVDLEEVRGAPWFVDLLRGTDATLVG 525
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81633.15830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNB8_ECTSI5.860e-8957.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 58..252
e-value: 3.6E-7
score: 31.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 106..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81633contigH-elongata_contig81633:342..2326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81633.15830.1mRNA_H-elongata_contig81633.15830.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81633 342..2326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81633.15830.1 ID=prot_H-elongata_contig81633.15830.1|Name=mRNA_H-elongata_contig81633.15830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
QYSEALTVETSSGGSDLDPLRLKAGAVVEFLDWILPEAPTPGAVGGYLGF
PAEALLTTGEEAAGTLLGLEHHNVGGLLARGDLCRLRARMAMLSGASLEE
EGHWREESVQWFVRAVTVAPQNAEALSTAGEGSLEYGKRSLRLYRNIVEA
GQGRVAISVSPPPLHAQGMQTSAIARLQEAGSLFSRAASAEASDSDVAYN
AACAYALCGDHGSCSRAFREFCRRLADAGTATAGRRDAAIRSLREARSDG
DLESVRTTDWFVNLVRRTEANLRGGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf