prot_H-elongata_contig81345.15795.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81345.15795.1
Unique Nameprot_H-elongata_contig81345.15795.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig81345.15795.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.150e-15
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 HLSLDPWVDRVSGAKYVGVRIFYITSTWELRTRLLAARLFNPPSSLLSSNHLSEILHDYLKDVLREFDLNVNHLYSATSHSGSGV 85
            H + D W  + S  KY+G+R+F+ TST+ L + L+A +LF P + L SS  LS+IL  ++++VL+EF L+ NHL+   + +GS V
Sbjct:  247 HANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSKQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDV 331          
BLAST of mRNA_H-elongata_contig81345.15795.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.210e-9
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    1 HLSLDPWVDRVSGAKYVGVRIFYITSTWELRTRLLAA--RLFNPPSSLLSSNHLSEILHDYLKDVLREFDLNVNHLYSATSHSGSGV 85
            H  +D W ++ SG K++GV ++Y+T+++E++  LL    + ++P    LS    SE+L + +K +L E  L+ + L S T+ SGS V
Sbjct:  112 HHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDV 198          
BLAST of mRNA_H-elongata_contig81345.15795.1 vs. uniprot
Match: G5A2D6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2D6_PHYSP)

HSP 1 Score: 56.2 bits (134), Expect = 2.830e-7
Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    5 DPWVDRVSGAKYVGVRIFYITSTWELRTRLLAARLFNPPSSLLSSNHLSEILHDYLKDVLREFDLNVNHLYSATSHSGSGV 85
            D W  +  GAK++G+R+++I   +EL+T LL AR FNP  S  S   +      +L D+L +F L    L+ ATS +G  V
Sbjct:  163 DFWTPKGKGAKFLGLRLYFINKQYELKTILLGARHFNPKYSERSGG-IRAPFRRWLDDILIDFGLTRADLFGATSDAGPDV 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81345.15795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE2.150e-1542.35Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KZ81_9PHAE3.210e-934.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
G5A2D6_PHYSP2.830e-738.27Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81345contigH-elongata_contig81345:831..1331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81345.15795.1mRNA_H-elongata_contig81345.15795.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81345 831..1331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81345.15795.1 ID=prot_H-elongata_contig81345.15795.1|Name=mRNA_H-elongata_contig81345.15795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
HLSLDPWVDRVSGAKYVGVRIFYITSTWELRTRLLAARLFNPPSSLLSSN
HLSEILHDYLKDVLREFDLNVNHLYSATSHSGSGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf