prot_H-elongata_contig81294.15788.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81294.15788.1
Unique Nameprot_H-elongata_contig81294.15788.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length113
Homology
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BLAST of mRNA_H-elongata_contig81294.15788.1 vs. uniprot
Match: A0A6H5KSH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH2_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.720e-17
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   39 DVAARRKAELLKRYGNRTASSEPIAVKREESAREAAGVAAE-DANKSAADEADHNQIWGDYVRYMEHQRKKGWKT 112
            D AA ++A LLKRYG+RT  S PI VK + +  + A  +   D  K+AA E +HN+IWGDYVRYMEHQRKKGWKT
Sbjct:   65 DEAAAKRAALLKRYGDRTPPSGPIPVKVDPAKAKTANPSRGFDVEKAAAGEVNHNEIWGDYVRYMEHQRKKGWKT 139
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BLAST of mRNA_H-elongata_contig81294.15788.1 vs. uniprot
Match: D8LSF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF9_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.720e-17
Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:   41 AARRKAELLKRYGNRTASSEPIAVK----REESAREAAGVAAEDANKSAADEADHNQIWGDYVRYMEHQRKKGWKT 112
            AA ++A LLKRYG+RT  S PIAVK    + E+   + G    D  K+AA E +HN+IWGDYVRYMEHQRKKGWKT
Sbjct:   67 AAAKRAALLKRYGDRTPPSGPIAVKVDPAKAETGNSSRGF---DVEKAAAGEVNHNEIWGDYVRYMEHQRKKGWKT 139
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81294.15788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSH2_9PHAE1.720e-1758.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSF9_ECTSI1.720e-1759.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81294contigH-elongata_contig81294:425..1664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81294.15788.1mRNA_H-elongata_contig81294.15788.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81294 388..2696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81294.15788.1 ID=prot_H-elongata_contig81294.15788.1|Name=mRNA_H-elongata_contig81294.15788.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MTQRSLATGESDKQGHFDGSPPTPAASEWEATAKGSTDDVAARRKAELLK
RYGNRTASSEPIAVKREESAREAAGVAAEDANKSAADEADHNQIWGDYVR
YMEHQRKKGWKT*
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