prot_H-elongata_contig80962.15751.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig80962.15751.1
Unique Name	prot_H-elongata_contig80962.15751.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	183

Homology

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 7.890e-102
Identity = 151/184 (82.07%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGS--GSQGKTISG-HQQIR 182
            LASGSNDNTCCLWDA+VG G+FSTAAPR+TLT+HQAAVKALAWCPFERNTLATGGGTADRCIK WN QTG+L+N VDTGSQVLSLLWS TEKELLSSHG  E+QLCLWKYPSMVK KEL+GHT RVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKS   GG G    + GK +SG H  +R
Sbjct:  354 LASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGSAAGKMLSGGHMSVR 537

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: B8BS23_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS23_THAPS)

HSP 1 Score: 244 bits (623), Expect = 5.280e-77
Identity = 121/185 (65.41%), Postives = 138/185 (74.59%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSE----GGGGFGSGSQGKTISGHQQIR 182
            LASG+NDN  CLWDAT      S++  RY LT+HQAAVKALAW P ERN LATGGGTADRCIK WNTQTGS++N +DTGSQV +L W+  EKE+LSSHG   +QLCLWKYP+M KVKEL GHT RVLHMA SPDG +VVS A DETLRFWDVFAPPSK+     G      G++ K +S    IR
Sbjct:  219 LASGANDNKLCLWDATAS----SSSRARYELTEHQAAVKALAWSPHERNLLATGGGTADRCIKFWNTQTGSMLNSIDTGSQVCALQWNPFEKEILSSHGFARNQLCLWKYPTMAKVKELDGHTARVLHMATSPDGASVVSAAADETLRFWDVFAPPSKTHTGKRGASDVPGGAKSKKLSRTMHIR 399

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A225V3I2_9STRA (Cell division cycle protein 20 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V3I2_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.060e-74
Identity = 115/182 (63.19%), Postives = 129/182 (70.88%), Query Frame = 0

Query:    1 MLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            MLASG NDN  CLW A       S   P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+++N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+A SPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  167 MLASGGNDNALCLWKAGSIGSSPSMQTPTHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGAMLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAGSPDGETVVSGAADETLRFWKVFGPNRKARKAGSSTAELSSSSLSSVMSIR 348

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A1E7FKR1_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKR1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.110e-73
Identity = 113/182 (62.09%), Postives = 130/182 (71.43%), Query Frame = 0

Query:    1 MLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            +LASG NDN  CLWDA+      +   PR+ +TDHQAAVKALAW P ERN LATGGGTADRCIK WN+QTG+L+N +DTGSQV +           SSHG   +Q+CLWKYPSM K+KEL GHT RVLH+A SPDG TVVSGAGDETLRFW+VFAPPSKS+    +GS      I    QIR
Sbjct:  270 ILASGGNDNLLCLWDASASSSMSTRMEPRFKMTDHQAAVKALAWSPHERNLLATGGGTADRCIKFWNSQTGALLNSIDTGSQVCAXXXXXXXXXXXSSHGYARNQICLWKYPSMAKIKELEGHTSRVLHLATSPDGSTVVSGAGDETLRFWEVFAPPSKSKPSEMYGSTGMPSKIKWTSQIR 451

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A0N7L6D5_PLAHL (Cell division cycle protein 20 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6D5_PLAHL)

HSP 1 Score: 238 bits (608), Expect = 3.100e-73
Identity = 117/183 (63.93%), Postives = 135/183 (73.77%), Query Frame = 0

Query:    1 MLASGSNDNTCCLWDA-TVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            MLASG NDN  CLW+A  +G  +  T  P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+++N VDTGSQV SLLWS+TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  353 MLASGGNDNALCLWNAGNIGTSR-GTQTPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGAMLNSVDTGSQVCSLLWSNTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSSTTELSSSSLSSVMSIR 534

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A7S0BZD0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZD0_9STRA)

HSP 1 Score: 227 bits (578), Expect = 4.160e-73
Identity = 119/186 (63.98%), Postives = 130/186 (69.89%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKS-----EGGGGFGSGSQGKTISGHQQIR 182
            LASG NDN  CLWDA+     F    PRYTLTDHQAAVKA+AW P ERN LATGGGTADRCIK WN+QTGSL+N +DTGSQV +L          SSHG   +QL LWKYP+M KVKEL GHT RVLHMA SPDG TVVS A DETLRFW+VFAPP KS     E  GG    S+ K+IS    IR
Sbjct:    3 LASGGNDNKLCLWDASSSAASFG---PRYTLTDHQAAVKAVAWSPHERNLLATGGGTADRCIKFWNSQTGSLLNSIDTGSQVCALXXXXXXXXXXSSHGFARNQLSLWKYPTMAKVKELDGHTARVLHMACSPDGGTVVSAAADETLRFWNVFAPPGKSSKRTTETQGGS---SKNKSISKTMHIR 182

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A448ZKN3_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZKN3_9STRA)

HSP 1 Score: 238 bits (607), Expect = 4.800e-73
Identity = 114/183 (62.30%), Postives = 133/183 (72.68%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDATVGQGQFSTAA-PRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGF-GSGSQGKTISGHQQIR 182
            LASG NDN  CLWDA+      S    PR+ +TDHQAAVKALAW P +RN LATGGGTADRCIK WN++ G+L+N +DTGSQV +L W+  EKE+LSSHG   +Q+CLWKYPSM K+KEL GHT RVLHMA SPDG TVVS AGDETLRFW++FAPPSK+       G G     +    QIR
Sbjct:  356 LASGGNDNLLCLWDASASLSSISNRQEPRFRMTDHQAAVKALAWSPHDRNLLATGGGTADRCIKFWNSKNGALLNSIDTGSQVCALQWNPFEKEILSSHGYARNQICLWKYPSMTKIKELEGHTSRVLHMATSPDGSTVVSAAGDETLRFWEIFAPPSKASASSEIIGRGGMPSKLKWTTQIR 538

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: D0N7K8_PHYIT (Cell division cycle protein 20 n=26 Tax=Phytophthora TaxID=4783 RepID=D0N7K8_PHYIT)

HSP 1 Score: 236 bits (601), Expect = 1.050e-72
Identity = 118/182 (64.84%), Postives = 134/182 (73.63%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDA-TVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            LASG NDN  CLW A ++G  + S  AP + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  305 LASGGNDNALCLWKAGSIGTSR-SMQAPTHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCSLLWSATEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSATAELTSSSLSSVMSIR 485

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL)

HSP 1 Score: 236 bits (602), Expect = 1.050e-72
Identity = 118/182 (64.84%), Postives = 133/182 (73.08%), Query Frame = 0

Query:    2 LASGSNDNTCCLW-DATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            LASG NDNT CLW  +T+G    ST  P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS +EKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF    K+   GG  +      +S    IR
Sbjct:  321 LASGGNDNTLCLWKSSTIGS---STQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKSGGSSTELTSSALSSVMSIR 499

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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD)

HSP 1 Score: 234 bits (597), Expect = 1.130e-72
Identity = 117/182 (64.29%), Postives = 133/182 (73.08%), Query Frame = 0

Query:    2 LASGSNDNTCCLWDAT-VGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 182
            LASG NDN  CLW A+ +G G  S  +P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS TEKE+LSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF    K+   G  G+      +S    IR
Sbjct:  254 LASGGNDNALCLWKASSIGSGN-SIQSPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKTSKTGSSGNELTSSRLSNVMSIR 434

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot

BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KU25_9PHAE	7.890e-102	82.07	ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto...	[more]
B8BS23_THAPS	5.280e-77	65.41	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A225V3I2_9STRA	5.060e-74	63.19	Cell division cycle protein 20 (Fragment) n=1 Tax=...	[more]
A0A1E7FKR1_9STRA	1.110e-73	62.09	WD40 repeat-like protein n=1 Tax=Fragilariopsis cy...	[more]
A0A0N7L6D5_PLAHL	3.100e-73	63.93	Cell division cycle protein 20 n=1 Tax=Plasmopara ...	[more]
A0A7S0BZD0_9STRA	4.160e-73	63.98	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A448ZKN3_9STRA	4.800e-73	62.30	Uncharacterized protein n=2 Tax=Pseudo-nitzschia T...	[more]
D0N7K8_PHYIT	1.050e-72	64.84	Cell division cycle protein 20 n=26 Tax=Phytophtho...	[more]
A0A8K1CPY5_PYTOL	1.050e-72	64.84	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3X281_GLOUD	1.130e-72	64.29	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 2..16 score: 40.18 coord: 54..68 score: 26.65 coord: 139..153 score: 36.59
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 70..110 e-value: 290.0 score: 1.5 coord: 25..67 e-value: 1.1E-4 score: 31.6 coord: 113..152 e-value: 2.4E-8 score: 43.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 29..67 e-value: 0.0039 score: 18.0 coord: 116..152 e-value: 3.8E-6 score: 27.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 1..15 score: 8.771
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 120..153 score: 14.819
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..155 e-value: 1.3E-57 score: 197.3
IPR033010	The WD repeat Cdc20/Fizzy family	PANTHER	PTHR19918	CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED	coord: 1..154
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 54..68
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 2..16
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 139..153
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 1..161 score: 20.751
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 1..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig80962	contig	H-elongata_contig80962:518..1066 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig80962.15751.1	mRNA_H-elongata_contig80962.15751.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig80962 518..2058 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig80962.15751.1 ID=prot_H-elongata_contig80962.15751.1|Name=mRNA_H-elongata_contig80962.15751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
MLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERN
TLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHG
CPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRF
WDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020472	G-protein_beta_WD-40_rep
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR033010	Cdc20/Fizzy
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR011047	Quinoprotein_ADH-like_supfam