mRNA_H-elongata_contig80962.15751.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80962.15751.1
Unique NamemRNA_H-elongata_contig80962.15751.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 3.260e-145
Identity = 210/257 (81.71%), Postives = 228/257 (88.72%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGS--GSQGKTISG-HQQIR 1538
            QFWD++  T LR+MNGHSARVGALAWNEH++TSGSRDTTAV+HDLR QRHAVGTL GH+QEVCGLS SPDGS LASGSNDNTCCLWDA+VG G+FSTAAPR+TLT+HQAAVKALAWCPFERNTLATGGGTADRCIK WN QTG+L+N VDTGSQVLSLLWS TEKELLSSHG  E+QLCLWKYPSMVK KEL+GHT RVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKS   GG G    + GK +SG H  +R
Sbjct:  281 QFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGSAAGKMLSGGHMSVR 537
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: B8BS23_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS23_THAPS)

HSP 1 Score: 337 bits (865), Expect = 1.910e-108
Identity = 163/262 (62.21%), Postives = 190/262 (72.52%), Query Frame = 3 
Query:  765 WRRNQFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSE----GGGGFGSGSQGKTISGHQQIR 1538
            W +   WD     +LR M+GH+ R+GAL+WN HI++SG RD   VNHD+R   H   TLSGHSQEVCGL+ SPDG  LASG+NDN  CLWDAT      S++  RY LT+HQAAVKALAW P ERN LATGGGTADRCIK WNTQTGS++N +DTGSQV +L W+  EKE+LSSHG   +QLCLWKYP+M KVKEL GHT RVLHMA SPDG +VVS A DETLRFWDVFAPPSK+     G      G++ K +S    IR
Sbjct:  142 WGKTLLWDVTAGKQLRKMDGHTDRIGALSWNRHILSSGGRDNLIVNHDVRIAEHKTATLSGHSQEVCGLAWSPDGMTLASGANDNKLCLWDATAS----SSSRARYELTEHQAAVKALAWSPHERNLLATGGGTADRCIKFWNTQTGSMLNSIDTGSQVCALQWNPFEKEILSSHGFARNQLCLWKYPTMAKVKELDGHTARVLHMATSPDGASVVSAAADETLRFWDVFAPPSKTHTGKRGASDVPGGAKSKKLSRTMHIR 399
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL)

HSP 1 Score: 336 bits (861), Expect = 1.700e-106
Identity = 163/255 (63.92%), Postives = 194/255 (76.08%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLW-DATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD A + ++R+MNGHS+RVGALAWN +I++SGSRD++ ++HD+RA++H V TLS H QEVCGLS SPDG+ LASG NDNT CLW  +T+G    ST  P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS +EKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF    K+   GG  +      +S    IR
Sbjct:  248 QLWDVAASKQVRSMNGHSSRVGALAWNNYILSSGSRDSSIIHHDVRARQHNVATLSSHEQEVCGLSWSPDGTTLASGGNDNTLCLWKSSTIGS---STQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKSGGSSTELTSSALSSVMSIR 499
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A225V3I2_9STRA (Cell division cycle protein 20 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V3I2_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.610e-106
Identity = 156/254 (61.42%), Postives = 186/254 (73.23%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD   + ++R MNGHS+RVGALAWN ++++SGSRD+T ++HD+RA+ H + TL+ H QEVCGL  SPDG+MLASG NDN  CLW A       S   P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+++N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+A SPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:   95 QLWDVTASRQVRTMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRAREHQLSTLTSHEQEVCGLQWSPDGTMLASGGNDNALCLWKAGSIGSSPSMQTPTHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGAMLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAGSPDGETVVSGAADETLRFWKVFGPNRKARKAGSSTAELSSSSLSSVMSIR 348
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A1E7FKR1_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKR1_9STRA)

HSP 1 Score: 333 bits (854), Expect = 4.420e-106
Identity = 157/254 (61.81%), Postives = 185/254 (72.83%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD     +LR+M+GHS R+G++AWN HI++SGSRDT  +NHD+R  RHAV TLS HSQEVCGL+ S DG +LASG NDN  CLWDA+      +   PR+ +TDHQAAVKALAW P ERN LATGGGTADRCIK WN+QTG+L+N +DTGSQV +           SSHG   +Q+CLWKYPSM K+KEL GHT RVLH+A SPDG TVVSGAGDETLRFW+VFAPPSKS+    +GS      I    QIR
Sbjct:  198 QLWDVHARKQLRSMDGHSDRIGSMAWNRHILSSGSRDTNIINHDVRVARHAVSTLSAHSQEVCGLTWSNDGEILASGGNDNLLCLWDASASSSMSTRMEPRFKMTDHQAAVKALAWSPHERNLLATGGGTADRCIKFWNSQTGALLNSIDTGSQVCAXXXXXXXXXXXSSHGYARNQICLWKYPSMAKIKELEGHTSRVLHLATSPDGSTVVSGAGDETLRFWEVFAPPSKSKPSEMYGSTGMPSKIKWTSQIR 451
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: D0N7K8_PHYIT (Cell division cycle protein 20 n=26 Tax=Phytophthora TaxID=4783 RepID=D0N7K8_PHYIT)

HSP 1 Score: 333 bits (853), Expect = 1.760e-105
Identity = 160/255 (62.75%), Postives = 193/255 (75.69%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDA-TVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD A + ++R MNGHS+RVGALAWN ++++SGSRD+T ++HD+RA++H + TL+ H QEVCGL  SPDG+ LASG NDN  CLW A ++G  + S  AP + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  232 QLWDVAASRQVRTMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARQHQLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKAGSIGTSR-SMQAPTHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCSLLWSATEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSATAELTSSSLSSVMSIR 485
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD)

HSP 1 Score: 330 bits (846), Expect = 4.130e-105
Identity = 159/255 (62.35%), Postives = 191/255 (74.90%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDAT-VGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD A   ++R+MNGHS+RVGALAWN ++++SGSRD+T ++HD+RA+ H + TL+ H QEVCGL  SPDG+ LASG NDN  CLW A+ +G G  S  +P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS TEKE+LSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF    K+   G  G+      +S    IR
Sbjct:  181 QLWDVAAQKQVRSMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARTHQLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKASSIGSGN-SIQSPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKTSKTGSSGNELTSSRLSNVMSIR 434
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: H3GL68_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GL68_PHYRM)

HSP 1 Score: 332 bits (851), Expect = 1.630e-104
Identity = 157/255 (61.57%), Postives = 192/255 (75.29%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDA-TVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD   + ++R MNGHS+RVGALAWN ++++SGSRD+T ++HD+RA++H + TL+ H QEVCGL  SPDG+MLASG NDN  CLW A ++G  + S   P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+++N +DTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  284 QLWDVTASRQVRTMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARQHQLSTLASHEQEVCGLQWSPDGTMLASGGNDNALCLWKAGSIGTSR-SMQTPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGAMLNSIDTGSQVCSLLWSATEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSSAAELSSSSLSSVMSIR 537
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A484EGT9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT9_BRELC)

HSP 1 Score: 332 bits (851), Expect = 1.630e-104
Identity = 157/254 (61.81%), Postives = 188/254 (74.02%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD   + ++R+MNGH++RVGALAWN ++++SGSRD+T VNHD+RA+ H + TL+ H QEVCGL  SPDG+MLASG NDN  CLW +       S   P + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+++N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF P  K+   G   +     ++S    IR
Sbjct:  284 QLWDVTASRQVRSMNGHASRVGALAWNSYVLSSGSRDSTIVNHDVRARHHQLSTLTSHEQEVCGLQWSPDGTMLASGGNDNALCLWKSGNIGATRSMQTPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGAMLNSVDTGSQVCSLLWSSTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWRVFGPNRKARKAGSSTTDLSSSSLSSVMSIR 537
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BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Match: A0A2D4BFE0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFE0_PYTIN)

HSP 1 Score: 331 bits (848), Expect = 3.420e-104
Identity = 160/254 (62.99%), Postives = 189/254 (74.41%), Query Frame = 3 
Query:  777 QFWDAAVATRLRNMNGHSARVGALAWNEHIVTSGSRDTTAVNHDLRAQRHAVGTLSGHSQEVCGLS*SPDGSMLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERNTLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHGCPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR 1538
            Q WD A   ++R+MNGHSARVGALAW+ +I++SGSRD+  ++HD+RA++H V  LS H QEVCGL  SPDG+ LASG NDNT CLW A++      T AP + L  H AAVKA+AWCP+ERN LATGGGTADR IK WNT  G+L+N VDTGSQV SLLWS TEKELLSSHG  +++LCLWKYPSM KVKELTGHT RVLH+AASPDG TVVSGA DETLRFW VF    K+   G   +     ++S    IR
Sbjct:  274 QLWDVAAMKQVRSMNGHSARVGALAWSNYILSSGSRDSNIIHHDVRARQHNVAVLSSHEQEVCGLQWSPDGTTLASGGNDNTLCLWKASMIGSGSRTHAPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTANGALLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKAGSSTTELASSSLSSVMSIR 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80962.15751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU25_9PHAE3.260e-14581.71ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
B8BS23_THAPS1.910e-10862.21Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A8K1CPY5_PYTOL1.700e-10663.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225V3I2_9STRA2.610e-10661.42Cell division cycle protein 20 (Fragment) n=1 Tax=... [more]
A0A1E7FKR1_9STRA4.420e-10661.81WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]
D0N7K8_PHYIT1.760e-10562.75Cell division cycle protein 20 n=26 Tax=Phytophtho... [more]
K3X281_GLOUD4.130e-10562.35Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GL68_PHYRM1.630e-10461.57Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484EGT9_BRELC1.630e-10461.81Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2D4BFE0_PYTIN3.420e-10462.99Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80962contigH-elongata_contig80962:518..2058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.6
Seed ortholog evalue2.4e-82
Seed eggNOG ortholog2880.D7G293
Preferred nameCDC20
KEGG koko:K02084,ko:K03363,ko:K06709
KEGG Pathwayko01524,ko04110,ko04111,ko04113,ko04114,ko04115,ko04120,ko04210,ko04214,ko04215,ko05010,ko05012,ko05014,ko05016,ko05134,ko05152,ko05161,ko05166,ko05200,ko05203,ko05222,map01524,map04110,map04111,map04113,map04114,map04115,map04120,map04210,map04214,map04215,map05010,map05012,map05014,map05016,map05134,map05152,map05161,map05166,map05200,map05203,map05222
KEGG ModuleM00389,M00685
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007143,GO:0007144,GO:0007147,GO:0007275,GO:0007276,GO:0007292,GO:0007346,GO:0007399,GO:0008022,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010646,GO:0010720,GO:0010939,GO:0010941,GO:0010975,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019827,GO:0019899,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030154,GO:0030162,GO:0030163,GO:0030718,GO:0031145,GO:0031323,GO:0031325,GO:0031344,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031915,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0036211,GO:0040020,GO:0042127,GO:0042826,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043902,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045664,GO:0045787,GO:0048167,GO:0048285,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051276,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051445,GO:0051446,GO:0051603,GO:0051704,GO:0051726,GO:0051783,GO:0051960,GO:0051962,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060547,GO:0060548,GO:0061630,GO:0061659,GO:0061982,GO:0061983,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090128,GO:0090129,GO:0090307,GO:0097150,GO:0098687,GO:0098727,GO:0098813,GO:0099177,GO:0120035,GO:0140013,GO:0140014,GO:0140096,GO:1900193,GO:1900195,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901990,GO:1902494,GO:1902850,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903429,GO:1903431,GO:1903538,GO:1904146,GO:1904666,GO:1904668,GO:1905879,GO:1905881,GO:1990234,GO:2000026,GO:2000241,GO:2000243
EggNOG free text desc.Cell division cycle
EggNOG OGsCOG2319@1,KOG0305@2759
Ec32 ortholog descriptionPutative cell division cycle 20. Subunit or the Anaphase Promoting Complex
Ec32 orthologEc-16_002010.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Exons1
Model size1541
Cds size549
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931215.7193787-CDS-H-elongata_contig80962:517..10661622931215.7193787-CDS-H-elongata_contig80962:517..1066Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80962 518..1066 -
1691679745.1589332-CDS-H-elongata_contig80962:517..10661691679745.1589332-CDS-H-elongata_contig80962:517..1066Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80962 518..1066 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931215.7334802-UTR-H-elongata_contig80962:1066..20581622931215.7334802-UTR-H-elongata_contig80962:1066..2058Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80962 1067..2058 -
1691679745.1761727-UTR-H-elongata_contig80962:1066..20581691679745.1761727-UTR-H-elongata_contig80962:1066..2058Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80962 1067..2058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80962.15751.1prot_H-elongata_contig80962.15751.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80962 518..1066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80962.15751.1

>prot_H-elongata_contig80962.15751.1 ID=prot_H-elongata_contig80962.15751.1|Name=mRNA_H-elongata_contig80962.15751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
MLASGSNDNTCCLWDATVGQGQFSTAAPRYTLTDHQAAVKALAWCPFERN
TLATGGGTADRCIKLWNTQTGSLINRVDTGSQVLSLLWSHTEKELLSSHG
CPEHQLCLWKYPSMVKVKELTGHTQRVLHMAASPDGRTVVSGAGDETLRF
WDVFAPPSKSEGGGGFGSGSQGKTISGHQQIR*
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mRNA from alignment at H-elongata_contig80962:518..2058-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80962.15751.1 ID=mRNA_H-elongata_contig80962.15751.1|Name=mRNA_H-elongata_contig80962.15751.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1541bp|location=Sequence derived from alignment at H-elongata_contig80962:518..2058- (Himanthalia elongata Himel1 dioecious)
ATGCACACCACTCGACCTCAGGACATCGCGGGATTCGAAGCCTCCATGTC
CTTCGACACCCCACTTGACACGTCGGTGATGCCTCGGTGGCAGCGCAAGC
AGCTCCAGCAGCAGCAGCAAAACCAGCCCCAGAATGGTACTGCGGTGTCT
TCTTCGTTTTCGACATCGAACTGTTCTTCGTCATCCTCTACAGGGAGCGC
TTGTGTGGAGACGCGCGATCGCTTTATCCCGAATCGCTCCTCGATGTGCA
TGGAGCGATCGAACTACCTCATGAGCAAGGAGAACGACAGCAGCGCACCG
GTGGATATGCCACGGCCGAGCGGTAATAACGCAGTGACCCGAGGCGATTT
TCAAAAGGTACTTGAGTCCAATCTGCTCGGAGCCCCAGTGCCCCGTGAGG
ATGGATATCGCGTCCTGGCTTTCCGAAACAAGGCGCCAGCACAGGAGGAG
GGTTACCAGAATGGGCTCAAGGTGCTTTACAGTCAGAACAAGGGCCGGGC
GGGAGGGATTCCGGGGCGTCCCACCCGTCATATTCCCTCTGCTCCAGTCC
GAATCCTCGACGCGCCCGACCTGATCGACGACTACTATCTCAACCTGCTT
TCGTGGGGATTGAATGATATGCTTGCGATCGCCCTCGGACAGTGCGTGTA
CCTCTGGAACGCAAGGAGCGGGGACATCACGGAGCTGCTCAGCCTTGGAG
GCGAAGACTATGTTTCCTCGGTCGCTTGGACCAAGAGCGGGACACACCTC
GCCGTCGGCACCGCTGGCGGCGAAACCAGTTCTGGGATGCCGCCGTAGCC
ACCCGTCTTCGCAACATGAATGGTCACAGTGCTCGCGTCGGTGCGCTCGC
GTGGAACGAGCACATCGTGACCTCGGGATCGAGGGACACAACGGCGGTGA
ACCACGACCTCCGCGCTCAGCGCCACGCGGTGGGGACCCTCAGTGGTCAC
AGCCAGGAGGTATGCGGGCTGAGCTGATCGCCGGACGGGAGCATGCTAGC
GTCGGGGAGTAACGACAACACCTGCTGCCTGTGGGACGCGACTGTTGGCC
AGGGTCAATTCTCCACGGCAGCGCCGCGTTATACGTTGACGGACCACCAG
GCGGCCGTGAAAGCGCTCGCGTGGTGCCCGTTTGAGCGCAACACACTAGC
GACAGGAGGGGGAACCGCCGACCGCTGCATCAAGCTCTGGAACACGCAGA
CCGGGTCGCTTATCAACCGTGTGGACACCGGCAGCCAGGTGCTATCTCTC
TTGTGGTCCCATACCGAGAAGGAGCTCCTGTCCAGCCACGGCTGCCCCGA
ACACCAGCTGTGTCTGTGGAAGTACCCCTCGATGGTGAAGGTCAAAGAGC
TCACCGGCCATACCCAGCGTGTTCTCCACATGGCTGCGTCTCCCGATGGG
CGCACGGTAGTGTCTGGCGCCGGGGACGAGACCCTGCGTTTCTGGGACGT
GTTCGCGCCGCCGTCGAAGTCCGAAGGCGGTGGGGGCTTCGGCTCGGGGA
GCCAGGGGAAGACTATTTCAGGGCACCAACAAATCAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig80962:518..2058-

>mRNA_H-elongata_contig80962.15751.1 ID=mRNA_H-elongata_contig80962.15751.1|Name=mRNA_H-elongata_contig80962.15751.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig80962:518..2058- (Himanthalia elongata Himel1 dioecious)
ATGCTAGCGTCGGGGAGTAACGACAACACCTGCTGCCTGTGGGACGCGAC
TGTTGGCCAGGGTCAATTCTCCACGGCAGCGCCGCGTTATACGTTGACGG
ACCACCAGGCGGCCGTGAAAGCGCTCGCGTGGTGCCCGTTTGAGCGCAAC
ACACTAGCGACAGGAGGGGGAACCGCCGACCGCTGCATCAAGCTCTGGAA
CACGCAGACCGGGTCGCTTATCAACCGTGTGGACACCGGCAGCCAGGTGC
TATCTCTCTTGTGGTCCCATACCGAGAAGGAGCTCCTGTCCAGCCACGGC
TGCCCCGAACACCAGCTGTGTCTGTGGAAGTACCCCTCGATGGTGAAGGT
CAAAGAGCTCACCGGCCATACCCAGCGTGTTCTCCACATGGCTGCGTCTC
CCGATGGGCGCACGGTAGTGTCTGGCGCCGGGGACGAGACCCTGCGTTTC
TGGGACGTGTTCGCGCCGCCGTCGAAGTCCGAAGGCGGTGGGGGCTTCGG
CTCGGGGAGCCAGGGGAAGACTATTTCAGGGCACCAACAAATCAGGTAAA
TGCTAGCGTCGGGGAGTAACGACAACACCTGCTGCCTGTGGGACGCGACT
GTTGGCCAGGGTCAATTCTCCACGGCAGCGCCGCGTTATACGTTGACGGA
CCACCAGGCGGCCGTGAAAGCGCTCGCGTGGTGCCCGTTTGAGCGCAACA
CACTAGCGACAGGAGGGGGAACCGCCGACCGCTGCATCAAGCTCTGGAAC
ACGCAGACCGGGTCGCTTATCAACCGTGTGGACACCGGCAGCCAGGTGCT
ATCTCTCTTGTGGTCCCATACCGAGAAGGAGCTCCTGTCCAGCCACGGCT
GCCCCGAACACCAGCTGTGTCTGTGGAAGTACCCCTCGATGGTGAAGGTC
AAAGAGCTCACCGGCCATACCCAGCGTGTTCTCCACATGGCTGCGTCTCC
CGATGGGCGCACGGTAGTGTCTGGCGCCGGGGACGAGACCCTGCGTTTCT
GGGACGTGTTCGCGCCGCCGTCGAAGTCCGAAGGCGGTGGGGGCTTCGGC
TCGGGGAGCCAGGGGAAGACTATTTCAGGGCACCAACAAATCAGGTAA
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