prot_H-elongata_contig80902.15747.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A5N6PGN7_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PGN7_9ASTR) HSP 1 Score: 52.8 bits (125), Expect = 1.990e-6 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADVEE-IYVELPDAYCDPRK--QVGLLKKAMYGLVHAGLLW 62
VLSM GW RQLDV A+L D++E +Y+ P + DP K V LL K++YGL A W
Sbjct: 243 VLSMAVTHGWPLRQLDVQNAFLNGDLQETVYLRQPPGFVDPAKPNHVCLLHKSLYGLKQAPRAW 306
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: UPI000A2B6A5C (uncharacterized protein LOC107627359 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI000A2B6A5C) HSP 1 Score: 52.4 bits (124), Expect = 2.740e-6 Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0
Query: 1 MVLSMIAALGWEARQLDVDMAYLEADVEEIYVELPDAYCDPRKQVGLLKKAMYGLVHAGLLW 62
++L+++AA GWE QLDV+ +L +++E+Y+ P P V L K++YGL A W
Sbjct: 502 LLLTLVAAKGWELHQLDVNTTFLHGELQEVYMLPPQGLVVPNSAVCRLDKSLYGLKQASRQW 563
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A803QDY6_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QDY6_CANSA) HSP 1 Score: 50.4 bits (119), Expect = 1.300e-5 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADV-EEIYVELPDAYCDPR--KQVGLLKKAMYGLVHAGLLW 62
VL++ + GW+ RQLDV+ A+L D+ EEIY+ P + DP +V L KA+YGL A W
Sbjct: 114 VLTIALSKGWDVRQLDVNNAFLNGDLQEEIYMVQPPGFVDPEHPNKVCKLHKAIYGLKQAPRAW 177
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A2N9GUB1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GUB1_FAGSY) HSP 1 Score: 50.1 bits (118), Expect = 1.770e-5 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADV-EEIYVELPDAYCDPRKQVGLLKKAMYGLVHAG 59
+L++ A W Q+DV A+L D+ EE+Y++ P Y D + QV L++A+YGL HAG
Sbjct: 127 LLAVAAVRHWPLFQMDVKNAFLNGDLLEEVYMQPPPGYPDSQNQVCHLRRALYGLKHAG 185
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT) HSP 1 Score: 49.7 bits (117), Expect = 2.470e-5 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADVEEIYVELPDAYCDPR--KQVGLLKKAMYGLVHAGLLW 62
+L++ A WE Q+DV A+L+ ++EEIY+ PD Y + V LKK++YGL + W
Sbjct: 819 LLALSNAKNWEVHQMDVKTAFLQGNLEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCW 881
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: UPI001C659808 (hypothetical protein n=1 Tax=Bacillus sp. SRB_331 TaxID=1969379 RepID=UPI001C659808) HSP 1 Score: 48.1 bits (113), Expect = 2.660e-5 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADV-EEIYVELPDAYC--DPRKQVGLLKKAMYGLVHAGLLW 62
+ ++ A+L RQLDV A+L+A++ EEIY+ P+ + DP K V LKK++YGL AGL+W
Sbjct: 64 IFALAASLNLTLRQLDVVGAFLQAELPEEIYMVQPEGFISEDP-KLVCRLKKSLYGLKQAGLVW 126
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A834VUE0_9PLEO (Integrase catalytic domain-containing protein n=9 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A834VUE0_9PLEO) HSP 1 Score: 49.3 bits (116), Expect = 3.410e-5 Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADVEE-IYVELPDAYCDPRKQVGLLKKAMYGLVHAGLLW 62
++++ AA G +A Q DV A+L A +E+ +YV+ PD Y + ++ LK+A+YGL A LLW
Sbjct: 1052 LMALTAAFGLKAYQYDVLNAFLNAPLEKLVYVQTPDPYVEELGKILELKRALYGLKDAPLLW 1113
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 48.9 bits (115), Expect = 4.550e-5 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVDMAYLEADV-EEIYVELPDAYCDPRKQVGLLKKAMYGLVHAGLLW 62
LS+ A G+ QLDVD A+L AD+ E++Y+E P+ +V L KA+YGL AG W
Sbjct: 91 LSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAW 151
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A438I6P4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I6P4_VITVI) HSP 1 Score: 47.8 bits (112), Expect = 5.340e-5 Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEADVEEIYVELPDAYCDPRK-QVGLLKKAMYGLVHAGLLW 62
+LS++A L W+ +QLD+ A+L D+EE+Y+ELP + RK + L+ GL + W
Sbjct: 85 LLSLVANLNWQLQQLDIKNAFLNGDLEEVYMELPYGFDQGRKGKFASLENLSMGLKQSPCAW 146
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Match: A0A8H7HK67_9AGAM (Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7HK67_9AGAM) HSP 1 Score: 48.5 bits (114), Expect = 6.210e-5 Identity = 23/63 (36.51%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 1 MVLSMIAALGWEARQLDVDMAYLEADVE-EIYVELPDAYCDPRKQVGLLKKAMYGLVHAGLLW 62
M++S+ W+ +QLDV++AYL A+V+ ++Y++ + D +V LK+++YGL AG +W
Sbjct: 344 MLVSIANQYNWDIQQLDVNLAYLHAEVDKDLYMQQIPYFSDGTNKVLKLKQSIYGLKQAGQMW 406 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80902.15747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig80902.15747.1 ID=prot_H-elongata_contig80902.15747.1|Name=mRNA_H-elongata_contig80902.15747.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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