prot_H-elongata_contig79950.15644.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79950.15644.1
Unique Nameprot_H-elongata_contig79950.15644.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length267
Homology
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BLAST of mRNA_H-elongata_contig79950.15644.1 vs. uniprot
Match: D7FYV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV4_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 9.820e-62
Identity = 133/213 (62.44%), Postives = 148/213 (69.48%), Query Frame = 0 
Query:   57 RQASRLTLQESPCLQGSGIALAVEG--DASLLANHGPLPSRSYVILVRPHRRRVGKRG--GGDRGKGQELVGAFDEGYYWHGVGETTAVEALGNLLCQQVERMFPPXXXXXXXXXXXXGAVGRKRCGGGVVVDCDMMRGCVSDVKLGWPIPDGFWACILPEGSPYLESGFVPEDHRRKLLSQDLRPSSRSRPVRIFGVCFESRKAGRSFVWEV 265
            RQA  L LQE+PCLQGSGI +AVEG   ASLLA HGPLP RSY+ LVRP  RRVG     GG    G E VG FDEGYYWHGVGET AVE +G LLCQQV+RMFP  XXXXXXXXXXX         GG  +   MMRG V+DVK+G P+P+GFW C+LPEGSP            R++L QDLRP  RSR VR+FGVC  SRKA +SFVWEV
Sbjct:   61 RQARVLELQENPCLQGSGIVIAVEGPCSASLLAKHGPLPDRSYICLVRPRSRRVGSANEKGGVHFCGGERVGTFDEGYYWHGVGETAAVEGVGILLCQQVDRMFPSPXXXXXXXXXXXXXXXXXXGIGGAGLFGGMMRGFVADVKVGLPVPNGFWECVLPEGSP---------SDSRRMLWQDLRPDRRSRAVRVFGVCAGSRKARQSFVWEV 264
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79950.15644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYV4_ECTSI9.820e-6262.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79950contigH-elongata_contig79950:363..2753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79950.15644.1mRNA_H-elongata_contig79950.15644.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79950 363..2753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79950.15644.1 ID=prot_H-elongata_contig79950.15644.1|Name=mRNA_H-elongata_contig79950.15644.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp
QGRRLLDRLPQSTPQAPPPLEVDQGCEPALFLGLFSCMVPPLAAVVHQTR
NETPDLRQASRLTLQESPCLQGSGIALAVEGDASLLANHGPLPSRSYVIL
VRPHRRRVGKRGGGDRGKGQELVGAFDEGYYWHGVGETTAVEALGNLLCQ
QVERMFPPPSAAQGRRRRKRGAVGRKRCGGGVVVDCDMMRGCVSDVKLGW
PIPDGFWACILPEGSPYLESGFVPEDHRRKLLSQDLRPSSRSRPVRIFGV
CFESRKAGRSFVWEVQ*
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