prot_H-elongata_contig78794.15547.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78794.15547.1
Unique Nameprot_H-elongata_contig78794.15547.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
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BLAST of mRNA_H-elongata_contig78794.15547.1 vs. uniprot
Match: D7G1Y8_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y8_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.340e-66
Identity = 109/165 (66.06%), Postives = 130/165 (78.79%), Query Frame = 0 
Query:    7 PGYLARMKTIVSGSFETAKKAPATLEEAIAVLRGERDVKPDFERATYTVSSAFVGGCVHGWTRGASLAAQYPRHQRSIVRVRSAAGKGVSFALFALIFEGSSAALEALRRKEDFWGGAVGGGLAGMAYGVSGGVASARRGLLYGLWLGRLFGMFRNHVASLREEA 171
            PGY  R+K     +  TAK+AP T+EEA+AV++GER VKPD+ RA  TVS+AF GGC HGW  GA+LAA+YP HQRSIVRVR+ A +G+ FA FALIFEGSSA +EALRRK+DF GG VGG LAGMAYG     A+AR GL YG+WLG +FG+FRNHVASLRE+A
Sbjct:   95 PGYAHRLKAAFLDTVATAKRAPETMEEAMAVIKGERAVKPDYGRAVGTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGLRFATFALIFEGSSAVMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQA 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78794.15547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Y8_ECTSI1.340e-6666.06Similar to mitochondrial import inner membrane tra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 56..146
e-value: 1.6E-8
score: 34.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78794contigH-elongata_contig78794:686..2940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78794.15547.1mRNA_H-elongata_contig78794.15547.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78794 686..2940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78794.15547.1 ID=prot_H-elongata_contig78794.15547.1|Name=mRNA_H-elongata_contig78794.15547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MPPTQPPGYLARMKTIVSGSFETAKKAPATLEEAIAVLRGERDVKPDFER
ATYTVSSAFVGGCVHGWTRGASLAAQYPRHQRSIVRVRSAAGKGVSFALF
ALIFEGSSAALEALRRKEDFWGGAVGGGLAGMAYGVSGGVASARRGLLYG
LWLGRLFGMFRNHVASLREEA
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