prot_H-elongata_contig78067.15477.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78067.15477.1
Unique Nameprot_H-elongata_contig78067.15477.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A6H5L258_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L258_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.680e-73
Identity = 117/126 (92.86%), Postives = 124/126 (98.41%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPL 126
            VVTPYEGQRSYLV+HLQRTG LRSSLY+EIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCI++GNPRIL+KNPLWNALVNF+KDH+CLVEG LDNMQPSLMSFPPPL
Sbjct:  879 VVTPYEGQRSYLVDHLQRTGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKNPLWNALVNFYKDHECLVEGPLDNMQPSLMSFPPPL 1004          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: D7FN00_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN00_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 2.740e-73
Identity = 117/126 (92.86%), Postives = 124/126 (98.41%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPL 126
            VVTPYEGQRSYLV+HLQRTG LRSSLY+EIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCI++GNPRIL+KNPLWNALVNF+KDH+CLVEG LDNMQPSLMSFPPPL
Sbjct:  829 VVTPYEGQRSYLVDHLQRTGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKNPLWNALVNFYKDHECLVEGPLDNMQPSLMSFPPPL 954          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A812VX29_SYMMI (UPF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VX29_SYMMI)

HSP 1 Score: 193 bits (491), Expect = 1.750e-59
Identity = 88/125 (70.40%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPP 125
            VVTPYEGQRSY+V H++R+GPLR+ LY++IEVASVDSFQGREKD I+L+CVRSNE QGIGFL DPRRLNVALTRAR+G I++GN R+L+KN LWN+L+  F++ DCLV+G L+N+QPS++S P P
Sbjct:   13 VVTPYEGQRSYVVTHMERSGPLRTELYSDIEVASVDSFQGREKDFIILSCVRSNEQQGIGFLRDPRRLNVALTRARYGVIIIGNARLLAKNALWNSLLLHFQERDCLVQGPLNNLQPSMISLPKP 137          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A397FDY7_9STRA (AAA_12 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FDY7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.780e-58
Identity = 86/123 (69.92%), Postives = 108/123 (87.80%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFP 123
            V+TPYEGQR+Y+VN +QR GP+RS LY ++EVASVDSFQGREKDLI+L+CVRSNEHQGIGFLSD RRLNVALTRA++G I++GNPR+L+K  LWN L+N ++D   +VEG+L+N+QPS M FP
Sbjct:   16 VITPYEGQRAYIVNFMQRNGPMRSQLYKDVEVASVDSFQGREKDLIILSCVRSNEHQGIGFLSDQRRLNVALTRAKYGVILLGNPRVLAKQELWNDLLNHYRDQSLVVEGSLNNLQPSFMHFP 138          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A7C8YCK5_OPUST (RNA helicase (Fragment) n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YCK5_OPUST)

HSP 1 Score: 193 bits (490), Expect = 6.190e-58
Identity = 86/127 (67.72%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPLK 127
            V+TPYEGQR+Y+VN++ R G LR  LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRAR+G +++GNP++LSK PLWN+L+  +K+H+CLVEG L+N++ S++ F  P K
Sbjct:  169 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 295          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A540KQ12_MALBA (AAA_12 domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540KQ12_MALBA)

HSP 1 Score: 196 bits (498), Expect = 6.650e-58
Identity = 87/127 (68.50%), Postives = 111/127 (87.40%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPLK 127
            V+TPYEGQR+Y+VN++ R G LR  LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRAR+G +++GNP++LSK PLWN+L+  +K+H+CLVEG L+N++ S++ FP P K
Sbjct:   41 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFPKPKK 167          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A0A9CJP8_ARUDO (AAA_12 domain-containing protein n=6 Tax=Poaceae TaxID=4479 RepID=A0A0A9CJP8_ARUDO)

HSP 1 Score: 193 bits (490), Expect = 1.330e-57
Identity = 86/127 (67.72%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPLK 127
            V+TPYEGQR+Y+VN++ R G LR  LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRAR+G +++GNP++LSK PLWN+L+  +K+H+CLVEG L+N++ S++ F  P K
Sbjct:  122 VITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 248          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A446KX30_TRITD (AAA_12 domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KX30_TRITD)

HSP 1 Score: 193 bits (491), Expect = 1.810e-57
Identity = 87/127 (68.50%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPLK 127
            V+TPYEGQR+Y+VN++ R G LR  LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRAR+G +V+GNP++LSK PLWN+L+  +K+H+CLVEG L+N++ S++ F  P K
Sbjct:   89 VITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 215          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A453BGD4_AEGTS (AAA_12 domain-containing protein n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BGD4_AEGTS)

HSP 1 Score: 193 bits (491), Expect = 1.930e-57
Identity = 87/127 (68.50%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPPLK 127
            V+TPYEGQR+Y+VN++ R G LR  LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRAR+G +V+GNP++LSK PLWN+L+  +K+H+CLVEG L+N++ S++ F  P K
Sbjct:  157 VITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 283          
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Match: A0A0C3PP96_PHLGI (AAA_12 domain-containing protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PP96_PHLGI)

HSP 1 Score: 187 bits (474), Expect = 2.000e-57
Identity = 84/125 (67.20%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNFFKDHDCLVEGALDNMQPSLMSFPPP 125
            VVTPYEGQRSY+VN++Q  G L+  LY EIEVASVD+FQGREKD I+L+CVRSNEHQGIGFL+DPRRLNVALTRA++G +++GNP++LSK+PLW+ L+  +K+ +CLVEG L+N+QPS++ F  P
Sbjct:   78 VVTPYEGQRSYIVNYMQFNGTLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVEGPLNNLQPSMIQFSKP 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78067.15477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L258_9PHAE1.680e-7392.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN00_ECTSI2.740e-7392.86RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A812VX29_SYMMI1.750e-5970.40UPF1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A397FDY7_9STRA3.780e-5869.92AAA_12 domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A7C8YCK5_OPUST6.190e-5867.72RNA helicase (Fragment) n=3 Tax=Opuntia streptacan... [more]
A0A540KQ12_MALBA6.650e-5868.50AAA_12 domain-containing protein n=1 Tax=Malus bac... [more]
A0A0A9CJP8_ARUDO1.330e-5767.72AAA_12 domain-containing protein n=6 Tax=Poaceae T... [more]
A0A446KX30_TRITD1.810e-5768.50AAA_12 domain-containing protein n=1 Tax=Triticum ... [more]
A0A453BGD4_AEGTS1.930e-5768.50AAA_12 domain-containing protein n=4 Tax=Aegilops ... [more]
A0A0C3PP96_PHLGI2.000e-5767.20AAA_12 domain-containing protein n=1 Tax=Phlebiops... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..123
e-value: 1.2E-42
score: 147.6
NoneNo IPR availablePANTHERPTHR10887:SF451coord: 1..122
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 1..122
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 1..85
e-value: 1.8E-30
score: 106.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78067contigH-elongata_contig78067:507..2137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78067.15477.1mRNA_H-elongata_contig78067.15477.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78067 507..2137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78067.15477.1 ID=prot_H-elongata_contig78067.15477.1|Name=mRNA_H-elongata_contig78067.15477.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
VVTPYEGQRSYLVNHLQRTGPLRSSLYAEIEVASVDSFQGREKDLILLTC
VRSNEHQGIGFLSDPRRLNVALTRARFGCIVVGNPRILSKNPLWNALVNF
FKDHDCLVEGALDNMQPSLMSFPPPLK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase