prot_H-elongata_contig77877.15462.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig77877.15462.1
Unique Name	prot_H-elongata_contig77877.15462.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	125

Homology

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BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KAD5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD5_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.870e-23
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0

Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:  128 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 257

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BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KMJ3_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ3_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.530e-22
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0

Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC+ R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:   28 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 157

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BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.400e-22
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0

Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:  128 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 257

[Close]

BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.480e-18
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 0

Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIR 114
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+T      W+++DEQM     ++ + ++
Sbjct:   28 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMIKTVSKYEQGMK 146

[Close]

BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-16
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 0

Query:   22 IRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMA--------SKQDKKPGEDGYDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
            +R HW   + DD+P VRKC++R+ F L+Y R+IH +        + +DK P  + +D   HIR LE ILN AW+       W+ +DEQM      F   + R  P +PI  G
Sbjct:  665 MRKHWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGEDKTPNPE-FDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHG 775

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot

BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5KAD5_9PHAE	6.870e-23	36.92	DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5KMJ3_9PHAE	1.530e-22	36.92	DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5JER6_9PHAE	6.400e-22	36.92	DDE_Tnp_1_7 domain-containing protein (Fragment) n...	[more]
A0A6H5KCC7_9PHAE	4.480e-18	35.29	DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5JJP9_9PHAE	1.290e-16	37.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029526	PiggyBac transposable element-derived protein	PFAM	PF13843	DDE_Tnp_1_7	coord: 3..125 e-value: 4.7E-10 score: 39.3
None	No IPR available	PANTHER	PTHR46599	FAMILY NOT NAMED	coord: 2..125
None	No IPR available	PANTHER	PTHR46599:SF2	SI:CH211-130M23.5	coord: 2..125
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..125
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.568

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig77877	contig	H-elongata_contig77877:1548..2036 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig77877.15462.1	mRNA_H-elongata_contig77877.15462.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig77877 1548..2060 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig77877.15462.1 ID=prot_H-elongata_contig77877.15462.1|Name=mRNA_H-elongata_contig77877.15462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MNHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVY
CRYIHMASKQDKKPGEDGYDILHHIRGLEYILNKAWSTCCCPRRWVAFDE
QMDVNKGRFGKVIRRYLPNKPIKCG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029526	PGBD