prot_H-elongata_contig77877.15462.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77877.15462.1
Unique Nameprot_H-elongata_contig77877.15462.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KAD5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD5_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.870e-23
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:  128 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 257          
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KMJ3_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ3_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.530e-22
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0
Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC+ R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:   28 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 157          
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.400e-22
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+       W+++DEQM     ++   +  Y P KPIK G
Sbjct:  128 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHG 257          
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.480e-18
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 0
Query:    2 NHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMASKQDKK----PGEDG--YDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIR 114
             H+  +IG+ I MGL     +R HW     D++P V+KC++R+ F L+YCR++H +     +     GE+   YD   HIR LE ILN AW+T      W+++DEQM     ++ + ++
Sbjct:   28 QHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMIKTVSKYEQGMK 146          
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-16
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 0
Query:   22 IRCHWETHVEDDFPRVRKCLTRNFFLLVYCRYIHMA--------SKQDKKPGEDGYDILHHIRGLEYILNKAWSTCCCPRRWVAFDEQMDVNKGRFGKVIRRYLPNKPIKCG 125
            +R HW   + DD+P VRKC++R+ F L+Y R+IH +        + +DK P  + +D   HIR LE ILN AW+       W+ +DEQM      F   + R  P +PI  G
Sbjct:  665 MRKHWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGEDKTPNPE-FDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHG 775          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77877.15462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAD5_9PHAE6.870e-2336.92DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KMJ3_9PHAE1.530e-2236.92DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JER6_9PHAE6.400e-2236.92DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5KCC7_9PHAE4.480e-1835.29DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJP9_9PHAE1.290e-1637.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 3..125
e-value: 4.7E-10
score: 39.3
NoneNo IPR availablePANTHERPTHR46599FAMILY NOT NAMEDcoord: 2..125
NoneNo IPR availablePANTHERPTHR46599:SF2SI:CH211-130M23.5coord: 2..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77877contigH-elongata_contig77877:1548..2036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77877.15462.1mRNA_H-elongata_contig77877.15462.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77877 1548..2060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77877.15462.1 ID=prot_H-elongata_contig77877.15462.1|Name=mRNA_H-elongata_contig77877.15462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MNHMYAIIGLVILMGLQPFGEIRCHWETHVEDDFPRVRKCLTRNFFLLVY
CRYIHMASKQDKKPGEDGYDILHHIRGLEYILNKAWSTCCCPRRWVAFDE
QMDVNKGRFGKVIRRYLPNKPIKCG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD