prot_H-elongata_contig77080.15381.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77080.15381.1
Unique Nameprot_H-elongata_contig77080.15381.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: D8LKX7_ECTSI (K+ transporter, Kef-type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX7_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.040e-76
Identity = 131/194 (67.53%), Postives = 161/194 (82.99%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADSKSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFRVSARGPD 194
            KVLA+G  +L +  W+ RFDLI+L   LA YL VG+PGNR ALYVD HP LSDV E+P AL VLRL+TVFP LR+LLET+ TV+ M++++MVLY CVSY+FA +GMAIF++++SDLL  RYSFSTLPEA + LFFLTV+NNWNDLLYPLV+S   G WSA+YFV YMLFC+T++LDVL GVVIEGFRVS +GP+
Sbjct:  511 KVLAVGGRRLLRLHWAHRFDLIILATCLASYLFVGMPGNRRALYVDHHPLLSDVIELPMALAVLRLVTVFPQLRKLLETMSTVAGMLMKIMVLYSCVSYTFATLGMAIFSNARSDLLEPRYSFSTLPEAAMTLFFLTVSNNWNDLLYPLVDSNPLGRWSAIYFVAYMLFCATMMLDVLTGVVIEGFRVSTKGPE 704          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: A0A7S1CFS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFS5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.210e-25
Identity = 71/193 (36.79%), Postives = 113/193 (58.55%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLV-VGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFAD-SKSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFRVSAR 191
            ++ A G+ + W  +W AR D++ +  SLA  ++ +  PG  L    D   GL D   + R+L  +R+L+VF   R  + T+     + +R+ VLY  V+Y+FA +GM  F D  + D    R+ F T   A+LAL  L+VTNNW D++YP++   +AG W+ALYFV Y + C  ++L++L G+VIE +  S +
Sbjct:  209 RIAANGFPRFWASAW-ARVDVVAVAVSLAVCILSLCAPGATLTQLPD--AGLQDAIGLLRSLRYVRVLSVFERFRAFVATVADGVAVAMRLFVLYFSVTYAFAVVGMEWFGDLGQHDDGEQRWGFETFGAAMLALTQLSVTNNWQDVMYPVLRDSAAGRWAALYFVAYFVLCVILLLNILSGIVIEAYSNSKQ 398          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: A0A7S3D6J8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D6J8_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 3.930e-8
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDV---FEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIF-----ADSKSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGF 186
            K+ A+G  +  +  W+  FD  V+L+S A   +V         Y+ +  GLS       V R+L VLR L  F   R L  T    + ++V + +      Y F  IG  +F      D + D      +F+++   ++ LF + V NNWN +LYP++N   AG W++LYF+ +      ++ +++V +V++ F
Sbjct:  386 KLYALGVKEYVRDRWNV-FDFFVVLSSYASLSLV---------YLGVF-GLSSAPAWTSVSRSLRVLRTLNAFKRFRILARTFLRTAPILVSLTMFSFVAFYFFGVIGTEVFYGYLSEDDEYD--DPHANFASIGNTIILLFQMLVINNWNSILYPMMNV--AGPWASLYFLLFHFITVVILANLIVAIVLQVF 564          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: A0A8C9Z1R5_SANLU (Uncharacterized protein n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9Z1R5_SANLU)

HSP 1 Score: 62.8 bits (151), Expect = 4.300e-8
Identity = 51/193 (26.42%), Postives = 94/193 (48.70%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADS------KSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            K+LA+ W   + R W+  FD ++++ SL  + ++     RL+           V    R L  +RLL   P L+R L  +         + +L L V + F+ +GM +F           +++  R +F TL  A++ +F +    NWN ++Y  + + S   W  +YFV  ++    V+L++LVG+V++ F+
Sbjct:  407 KLLALAW--TYFRDWNNSFDFVIVIISL--WEIISNADGRLS-----------VLRAFRLLRFVRLLHFLPYLKRQLLVLKRTMKEASTLCMLLLFVIFIFSVMGMHLFGGKYYYETQHGEVIVERKNFDTLLWAMVTVFQILTQENWNLVMYNAMATTSE--WGCIYFVVVIILGKHVLLNILVGIVVQSFQ 582          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: UPI0016538D89 (voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1 n=6 Tax=Sander lucioperca TaxID=283035 RepID=UPI0016538D89)

HSP 1 Score: 62.8 bits (151), Expect = 4.510e-8
Identity = 51/193 (26.42%), Postives = 94/193 (48.70%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADS------KSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            K+LA+ W   + R W+  FD ++++ SL  + ++     RL+           V    R L  +RLL   P L+R L  +         + +L L V + F+ +GM +F           +++  R +F TL  A++ +F +    NWN ++Y  + + S   W  +YFV  ++    V+L++LVG+V++ F+
Sbjct:  506 KLLALAW--TYFRDWNNSFDFVIVIISL--WEIISNADGRLS-----------VLRAFRLLRFVRLLHFLPYLKRQLLVLKRTMKEASTLCMLLLFVIFIFSVMGMHLFGGKYYYETQHGEVIVERKNFDTLLWAMVTVFQILTQENWNLVMYNAMATTSE--WGCIYFVVVIILGKHVLLNILVGIVVQSFQ 681          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: UPI00148FB1BF (voltage-dependent T-type calcium channel subunit alpha-1H-like n=4 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FB1BF)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-7
Identity = 51/193 (26.42%), Postives = 94/193 (48.70%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADS------KSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            K+LA+ W     + W+  FD ++++ SL  + V+G    +             V    R L  +RLL   P L R L  +         + +L L +++ F+ +GM +F           D++  R +F TL  +++ +F +    +WN +LY  +++ S   W+ LYFV  ++    V+L+VLVG+V++ F+
Sbjct:  491 KLLALKWEYF--KDWNNNFDFVLVIISL--WEVIGKAEGK-----------PSVLRSLRLLRFVRLLHFLPYLERQLRVLKKTFEEASALFLLLLSLNFVFSVLGMLLFGGKFQFKTKHGDIVPDRKNFDTLLWSMVTVFQILTQEDWNLVLYNAMSTTSP--WAILYFVVLIMVGKYVLLNVLVGIVVQSFQ 666          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: UPI0007DB6C63 (voltage-dependent T-type calcium channel subunit alpha-1G n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0007DB6C63)

HSP 1 Score: 61.6 bits (148), Expect = 1.170e-7
Identity = 53/174 (30.46%), Postives = 91/174 (52.30%), Query Frame = 0
Query:   19 FDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIF-----ADSKSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            FD I+++ S+  + +VG  G           GLS V    R + VL+L+   PAL+R L  +      V    +L +   + F+ +GM +F     ++   D L  R +F +L  A++ +F +    +WN +LY  + S S+  W+ALYF+  M F + V+ ++LV +++EGFR
Sbjct:  744 FDGIIVVISV--WEIVGQQGG----------GLS-VLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSS--WAALYFIALMTFGNYVLFNLLVAILVEGFR 902          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: A0A8D0A681_SANLU (Uncharacterized protein n=2 Tax=Sander lucioperca TaxID=283035 RepID=A0A8D0A681_SANLU)

HSP 1 Score: 61.2 bits (147), Expect = 1.510e-7
Identity = 48/193 (24.87%), Postives = 96/193 (49.74%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADSK------SDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            K+LA+ W   + R W+  FD ++++ SL  + ++     R++           V    R L  ++LL   P L+R L  +         + +L LC ++ F+ +GM +F           +++  R +F TL  A++ +F +    +WN ++Y  + + S   W+ +YFV  ++    V+L++LVG+V++ F+
Sbjct:  495 KLLALTW--TYFRDWNNIFDFVIVIISL--WEIISEADGRVS-----------VLRAFRLLRFVKLLHFLPYLKRQLLMLKWTMKESFTLCMLLLCFTFIFSVMGMHLFGGKSYYETQHGEVIVERKNFDTLLWAMVTVFQILTQEDWNRVMYNAMATTSK--WACIYFVVVIILGKHVLLNILVGIVVQSFQ 670          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: A0A812XVX9_9DINO (TPCN2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XVX9_9DINO)

HSP 1 Score: 60.5 bits (145), Expect = 1.910e-7
Identity = 49/186 (26.34%), Postives = 87/186 (46.77%), Query Frame = 0
Query:    3 LAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADSKSDLLAA-RYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            +A GW     + W + F L+  +A L  +L                 GL +VF   R    + L++  P LRRL  +IF    ++  + VL+      F  +G+A+F D   D  A    +F+  P+A LA++ LT T N+ D++ P ++     G   L+FV  +     ++L +L+ +V + ++
Sbjct:   71 VAFGWRHFKDKKWDSVFALLTFMAVLDWFLYYA-------------GGLHEVFRFSRPFRPILLISKLPGLRRLAASIFHTFFVIFDIAVLFAITVAFFGLLGVALFNDDHVDGYALDNDNFNNFPDAALAIYILTTTENFPDVMMPALHDRPVLG--LLFFVVALFIFLWLLLPLLLAIVYDRYK 241          
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Match: UPI00106E94D7 (voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1 n=3 Tax=Perca flavescens TaxID=8167 RepID=UPI00106E94D7)

HSP 1 Score: 58.9 bits (141), Expect = 9.380e-7
Identity = 50/193 (25.91%), Postives = 94/193 (48.70%), Query Frame = 0
Query:    1 KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPGLSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYSFAAIGMAIFADS------KSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLVNSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFR 187
            K+LA+ W   + R W+  FD ++ + SL  + ++     RL+           V    R L  +RLL   P L+R L  +         + +L L V + F+ +G+ +F           D++  R +F TL  A++ +F +    +WN ++Y  + + S   W+ +YFV  ++    V+L++LVG+V++ F+
Sbjct:  545 KLLALTW--TYFRDWNNIFDFLIAIISL--WELISKADGRLS-----------VLRAFRLLRFVRLLHFLPYLKRQLLVLKRTMTEAATLCMLLLFVIFIFSIVGIHLFGGKFYYETQHGDVIIERRNFDTLLWAMVTVFQILTQEDWNLVMYNAMANSSQ--WACIYFVVVIILGKHVLLNILVGIVVQSFQ 720          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77080.15381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKX7_ECTSI1.040e-7667.53K+ transporter, Kef-type n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S1CFS5_9STRA1.210e-2536.79Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3D6J8_9EUKA3.930e-828.35Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A8C9Z1R5_SANLU4.300e-826.42Uncharacterized protein n=1 Tax=Sander lucioperca ... [more]
UPI0016538D894.510e-826.42voltage-dependent T-type calcium channel subunit a... [more]
UPI00148FB1BF1.120e-726.42voltage-dependent T-type calcium channel subunit a... [more]
UPI0007DB6C631.170e-730.46voltage-dependent T-type calcium channel subunit a... [more]
A0A8D0A681_SANLU1.510e-724.87Uncharacterized protein n=2 Tax=Sander lucioperca ... [more]
A0A812XVX9_9DINO1.910e-726.34TPCN2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
UPI00106E94D79.380e-725.91voltage-dependent T-type calcium channel subunit a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 11..186
e-value: 3.1E-23
score: 82.3
NoneNo IPR availableGENE3D1.10.287.70coord: 71..189
e-value: 2.0E-17
score: 65.1
NoneNo IPR availablePANTHERPTHR45628FAMILY NOT NAMEDcoord: 1..187
NoneNo IPR availablePANTHERPTHR45628:SF7VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1coord: 1..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..183
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 3..186
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77080contigH-elongata_contig77080:402..2295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77080.15381.1mRNA_H-elongata_contig77080.15381.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77080 402..2295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77080.15381.1 ID=prot_H-elongata_contig77080.15381.1|Name=mRNA_H-elongata_contig77080.15381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
KVLAIGWWQLWQRSWSARFDLIVLLASLAGYLVVGVPGNRLALYVDLHPG
LSDVFEVPRALVVLRLLTVFPALRRLLETIFTVSVMVVRMMVLYLCVSYS
FAAIGMAIFADSKSDLLAARYSFSTLPEALLALFFLTVTNNWNDLLYPLV
NSVSAGGWSALYFVTYMLFCSTVVLDVLVGVVIEGFRVSARGPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom