prot_H-elongata_contig76479.15320.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76479.15320.1
Unique Nameprot_H-elongata_contig76479.15320.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A7S4DAK2_HETAK (40S ribosomal protein SA n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAK2_HETAK)

HSP 1 Score: 160 bits (404), Expect = 1.450e-46
Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            EASYVNVPVIAFCDSDSPL NVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTI+R +PWDVPVDLFFYR+PEELEKA+EAQA
Sbjct:  162 EASYVNVPVIAFCDSDSPLPNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTISRDAPWDVPVDLFFYRDPEELEKADEAQA 244          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: D7FHP2_ECTSI (40S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP2_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.190e-45
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            EASYVNVPVIAFCDSDSPLQNVDVAIP+NNKGKLSIGLLYWLLAREVLRMRGTI R   WDVPVDLFFYREPEELEKAEEAQA
Sbjct:  138 EASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQA 220          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: F0Y9V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V2_AURAN)

HSP 1 Score: 154 bits (389), Expect = 1.250e-45
Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            EASYVN+PVIAFCDSDSP Q+VDVAIP+NNKGKLSIGLLYWLLARE+LRMRGT+ R +PWDVPVDLFFYR+PEELEKA+EAQA
Sbjct:  130 EASYVNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPVDLFFYRDPEELEKADEAQA 212          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A8J2SYU6_9STRA (40S ribosomal protein SA n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYU6_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.460e-45
Identity = 75/83 (90.36%), Postives = 82/83 (98.80%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            EASYVN+PVIAFCDSDSPLQ+VDVAIP+NNKGKLSIGLLYWLLAREVLRMRGT++R +PWDVPVDLFFYR+PEELEKAEEAQA
Sbjct:  207 EASYVNLPVIAFCDSDSPLQHVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTVSRLAPWDVPVDLFFYRDPEELEKAEEAQA 289          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A1V9ZU98_9STRA (40S ribosomal protein SA n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZU98_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.670e-42
Identity = 71/82 (86.59%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQ 82
            E++YVNVPVIAFCDSDSPL+ VDVAIPANNKGKLSIGLLYWLL+REVLR+RGTI+R  PWDV VDLFFYR+PEELEKAEEAQ
Sbjct:  130 ESAYVNVPVIAFCDSDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWDVAVDLFFYRDPEELEKAEEAQ 211          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: D0MUE8_PHYIT (40S ribosomal protein SA n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0MUE8_PHYIT)

HSP 1 Score: 147 bits (372), Expect = 2.610e-42
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            E+S+VNVPVIAFCDSDSPLQ VDVAIPANNKGKLSIGLLYWLLAREVLR+RGTI+R  PWDV VDLF YR+PEEL+KAEEAQA
Sbjct:  130 ESSFVNVPVIAFCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRTLPWDVAVDLFLYRDPEELKKAEEAQA 212          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A5D6XMB2_9STRA (40S ribosomal protein SA n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMB2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.600e-42
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            E+S+VNVPVIAFCDSDSPLQ VDVAIPANNKGKLSIGLLYWLLAREVLR+RGTI+R  PWDV VDLF YR+PEEL+KAEEAQ+
Sbjct:  130 ESSFVNVPVIAFCDSDSPLQYVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRALPWDVAVDLFLYRDPEELKKAEEAQS 212          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A6V2AV66_9STRA (40S ribosomal protein SA n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AV66_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.500e-42
Identity = 69/82 (84.15%), Postives = 79/82 (96.34%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQ 82
            EASYVNVPVIAFCDSDSPLQ+VDVAIPANNKGKLSIGLLYWLLAREVLR+RG+++R S WDVPVDLFF+R+PE+L+KA+E Q
Sbjct:  139 EASYVNVPVIAFCDSDSPLQHVDVAIPANNKGKLSIGLLYWLLAREVLRLRGSVSRSSDWDVPVDLFFHRDPEDLKKADEEQ 220          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: A0A0W8CTG1_PHYNI (40S ribosomal protein SA n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CTG1_PHYNI)

HSP 1 Score: 147 bits (372), Expect = 5.590e-42
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            E+S+VNVPVIAFCDSDSPLQ VDVAIPANNKGKLSIGLLYWLLAREVLR+RGTI+R  PWDV VDLF YR+PEEL+KAEEAQA
Sbjct:  130 ESSFVNVPVIAFCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRALPWDVAVDLFLYRDPEELKKAEEAQA 212          
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Match: M4BW24_HYAAE (40S ribosomal protein SA n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW24_HYAAE)

HSP 1 Score: 145 bits (367), Expect = 1.210e-41
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTITRQSPWDVPVDLFFYREPEELEKAEEAQA 83
            E+S+VNVPVIAFCDSDSPLQ VDVAIPANNKGKLSIGLLYWLLAREVLR+RGTI+   PWDV VDLF YR+PEEL+KAEEAQA
Sbjct:  120 ESSFVNVPVIAFCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISHSLPWDVVVDLFLYRDPEELKKAEEAQA 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76479.15320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DAK2_HETAK1.450e-4692.7740S ribosomal protein SA n=2 Tax=Heterosigma akash... [more]
D7FHP2_ECTSI1.190e-4593.9840S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=... [more]
F0Y9V2_AURAN1.250e-4586.75Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2SYU6_9STRA1.460e-4590.3640S ribosomal protein SA n=1 Tax=Pelagomonas calce... [more]
A0A1V9ZU98_9STRA1.670e-4286.5940S ribosomal protein SA n=3 Tax=Saprolegniaceae T... [more]
D0MUE8_PHYIT2.610e-4286.7540S ribosomal protein SA n=15 Tax=Peronosporaceae ... [more]
A0A5D6XMB2_9STRA4.600e-4285.5440S ribosomal protein SA n=1 Tax=Pythium brassicum... [more]
A0A6V2AV66_9STRA5.500e-4284.1540S ribosomal protein SA n=2 Tax=Ditylum brightwel... [more]
A0A0W8CTG1_PHYNI5.590e-4286.7540S ribosomal protein SA n=2 Tax=Phytophthora TaxI... [more]
M4BW24_HYAAE1.210e-4185.5440S ribosomal protein SA n=1 Tax=Hyaloperonospora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 22..36
score: 50.87
coord: 1..12
score: 49.1
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 1..47
e-value: 1.6E-7
score: 30.8
NoneNo IPR availableGENE3D3.40.50.10490coord: 1..83
e-value: 5.2E-35
score: 122.6
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 1..82
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76479contigH-elongata_contig76479:138..676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76479.15320.1mRNA_H-elongata_contig76479.15320.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76479 138..676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76479.15320.1 ID=prot_H-elongata_contig76479.15320.1|Name=mRNA_H-elongata_contig76479.15320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
EASYVNVPVIAFCDSDSPLQNVDVAIPANNKGKLSIGLLYWLLAREVLRM
RGTITRQSPWDVPVDLFFYREPEELEKAEEAQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005707Ribosomal_S2_euk/arc
IPR023591Ribosomal_S2_flav_dom_sf